RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 GANQ9H2C0 597 aa24.42■■□□□ 1.5
SIX3-201ENST00000260653 ZCCHC17Q9NP64 241 aaKnown RBP24.42■■□□□ 1.5
SIX3-201ENST00000260653 EPN1Q9Y6I3 576 aaPredicted RBP24.42■■□□□ 1.5
SIX3-201ENST00000260653 ZNF236Q9UL36 1845 aa24.42■■□□□ 1.5
SIX3-201ENST00000260653 MAFO75444 373 aaPredicted RBP24.42■■□□□ 1.5
SIX3-201ENST00000260653 NDUFA10O95299 355 aa24.42■■□□□ 1.5
SIX3-201ENST00000260653 PON1P27169 355 aa24.42■■□□□ 1.5
SIX3-201ENST00000260653 DPY19L2P1Q6NXN4 242 aa24.42■■□□□ 1.5
SIX3-201ENST00000260653 PDXDC1Q6P996 788 aa24.42■■□□□ 1.5
SIX3-201ENST00000260653 GH1P01241 217 aa24.41■■□□□ 1.5
SIX3-201ENST00000260653 PPP2R5AQ15172 486 aa24.41■■□□□ 1.5
SIX3-201ENST00000260653 SMARCAD1Q9H4L7 1026 aa24.41■■□□□ 1.5
SIX3-201ENST00000260653 GCNT4Q9P109 453 aa24.41■■□□□ 1.5
SIX3-201ENST00000260653 GOLGA8IPA6NC78 632 aa24.41■■□□□ 1.5
SIX3-201ENST00000260653 LRRIQ4A6NIV6 560 aa24.41■■□□□ 1.5
SIX3-201ENST00000260653 GOLGA8JA6NMD2 632 aa24.41■■□□□ 1.5
SIX3-201ENST00000260653 HNRNPDLO14979 420 aaKnown RBP24.41■■□□□ 1.5
SIX3-201ENST00000260653 PLEKP08567 350 aaPredicted RBP24.41■■□□□ 1.5
SIX3-201ENST00000260653 LAMC2Q13753 1193 aa24.41■■□□□ 1.5
SIX3-201ENST00000260653 TRIM65Q6PJ69 517 aa24.41■■□□□ 1.5
SIX3-201ENST00000260653 GBP6Q6ZN66 633 aa24.41■■□□□ 1.5
SIX3-201ENST00000260653 NHEJ1Q9H9Q4 299 aaPredicted RBP24.41■■□□□ 1.5
SIX3-201ENST00000260653 TLL2Q9Y6L7 1015 aa24.41■■□□□ 1.5
SIX3-201ENST00000260653 GOLGA6L9A6NEM1 432 aa24.4■■□□□ 1.5
SIX3-201ENST00000260653 FAM155AB1AL88 458 aaPredicted RBP24.4■■□□□ 1.5
SIX3-201ENST00000260653 KIF2AO00139 706 aaPredicted RBP24.4■■□□□ 1.5
SIX3-201ENST00000260653 NAMPTP43490 491 aa24.4■■□□□ 1.5
SIX3-201ENST00000260653 FMO5P49326 533 aa24.4■■□□□ 1.5
SIX3-201ENST00000260653 CBWD6Q4V339 395 aa24.4■■□□□ 1.5
SIX3-201ENST00000260653 CBWD3Q5JTY5 395 aa24.4■■□□□ 1.5
SIX3-201ENST00000260653 CBWD5Q5RIA9 395 aa24.4■■□□□ 1.5
SIX3-201ENST00000260653 SYT10Q6XYQ8 523 aa24.4■■□□□ 1.5
SIX3-201ENST00000260653 SAAL1Q96ER3 474 aa24.4■■□□□ 1.5
SIX3-201ENST00000260653 TRPC6Q9Y210 931 aa24.4■■□□□ 1.5
SIX3-201ENST00000260653 DLG4P78352 724 aa24.4■■□□□ 1.5
SIX3-201ENST00000260653 CDK17Q00537 523 aa24.4■■□□□ 1.5
SIX3-201ENST00000260653 INTS8Q75QN2 995 aaKnown RBP24.4■■□□□ 1.5
SIX3-201ENST00000260653 LZTFL1Q9NQ48 299 aa24.4■■□□□ 1.5
SIX3-201ENST00000260653 REXO2Q9Y3B8 237 aaKnown RBP24.4■■□□□ 1.5
SIX3-201ENST00000260653 GTPBP10A4D1E9 387 aaKnown RBP24.39■■□□□ 1.5
SIX3-201ENST00000260653 H0YCG3 227 aa24.39■■□□□ 1.5
SIX3-201ENST00000260653 SLC26A2P50443 739 aa24.39■■□□□ 1.5
SIX3-201ENST00000260653 MORN1Q5T089 497 aa24.39■■□□□ 1.5
SIX3-201ENST00000260653 AFG1LQ8WV93 481 aa24.39■■□□□ 1.5
SIX3-201ENST00000260653 TRAPPC12Q8WVT3 735 aa24.39■■□□□ 1.5
SIX3-201ENST00000260653 BICD1Q96G01 975 aa24.39■■□□□ 1.5
SIX3-201ENST00000260653 PLCB1Q9NQ66 1216 aa24.39■■□□□ 1.5
SIX3-201ENST00000260653 ARHGAP20Q9P2F6 1191 aa24.39■■□□□ 1.5
SIX3-201ENST00000260653 ZHX1Q9UKY1 873 aaPredicted RBP24.39■■□□□ 1.5
SIX3-201ENST00000260653 USP20Q9Y2K6 914 aa24.39■■□□□ 1.5
SIX3-201ENST00000260653 TLR2O60603 784 aa24.39■■□□□ 1.49
SIX3-201ENST00000260653 KRT13P13646 458 aa24.39■■□□□ 1.49
SIX3-201ENST00000260653 CBWD2Q8IUF1 395 aa24.39■■□□□ 1.49
SIX3-201ENST00000260653 DEPTORQ8TB45 409 aa24.39■■□□□ 1.49
SIX3-201ENST00000260653 ABHD16BQ9H3Z7 469 aa24.39■■□□□ 1.49
SIX3-201ENST00000260653 SUGCTQ9HAC7 445 aa24.39■■□□□ 1.49
SIX3-201ENST00000260653 PPME1Q9Y570 386 aa24.39■■□□□ 1.49
SIX3-201ENST00000260653 LGALS2P05162 132 aa24.38■■□□□ 1.49
SIX3-201ENST00000260653 ADRB2P07550 413 aa24.38■■□□□ 1.49
SIX3-201ENST00000260653 ETF1P62495 437 aaKnown RBP24.38■■□□□ 1.49
SIX3-201ENST00000260653 ACVR2BQ13705 512 aa24.38■■□□□ 1.49
SIX3-201ENST00000260653 CAPSQ13938 189 aa24.38■■□□□ 1.49
SIX3-201ENST00000260653 BRDTQ58F21 947 aaPredicted RBP24.38■■□□□ 1.49
SIX3-201ENST00000260653 KLHDC7AQ5VTJ3 777 aa24.38■■□□□ 1.49
SIX3-201ENST00000260653 C17orf99Q6UX52 265 aa24.38■■□□□ 1.49
SIX3-201ENST00000260653 LRRC71Q8N4P6 559 aa24.38■■□□□ 1.49
SIX3-201ENST00000260653 PPTC7Q8NI37 304 aa24.38■■□□□ 1.49
SIX3-201ENST00000260653 KCNG1Q9UIX4 513 aa24.38■■□□□ 1.49
SIX3-201ENST00000260653 ABT1Q9ULW3 272 aaKnown RBP24.38■■□□□ 1.49
SIX3-201ENST00000260653 UCHL3P15374 230 aa24.38■■□□□ 1.49
SIX3-201ENST00000260653 SMPD1P17405 629 aa24.38■■□□□ 1.49
SIX3-201ENST00000260653 MKRN4PQ13434 485 aaPredicted RBP24.38■■□□□ 1.49
SIX3-201ENST00000260653 PLEKHO2Q8TD55 490 aa24.38■■□□□ 1.49
SIX3-201ENST00000260653 PRPF31Q8WWY3 499 aaKnown RBP24.38■■□□□ 1.49
SIX3-201ENST00000260653 POMGNT1Q8WZA1 660 aa24.38■■□□□ 1.49
SIX3-201ENST00000260653 EMID1Q96A84 441 aaPredicted RBP24.38■■□□□ 1.49
SIX3-201ENST00000260653 PRIMPOLQ96LW4 560 aa24.38■■□□□ 1.49
SIX3-201ENST00000260653 RNPEPQ9H4A4 650 aa24.38■■□□□ 1.49
SIX3-201ENST00000260653 SIX2Q9NPC8 291 aa24.38■■□□□ 1.49
SIX3-201ENST00000260653 FHOD1Q9Y613 1164 aa24.38■■□□□ 1.49
SIX3-201ENST00000260653 SIP14410 1827 aa24.38■■□□□ 1.49
SIX3-201ENST00000260653 VAMP7P51809 220 aa24.37■■□□□ 1.49
SIX3-201ENST00000260653 MAP2K5Q13163 448 aa24.37■■□□□ 1.49
SIX3-201ENST00000260653 SNRNP35Q16560 246 aaKnown RBP24.37■■□□□ 1.49
SIX3-201ENST00000260653 GPBP1L1Q9HC44 474 aaPredicted RBP24.37■■□□□ 1.49
SIX3-201ENST00000260653 SLC5A4Q9NY91 659 aa24.37■■□□□ 1.49
SIX3-201ENST00000260653 ERAP1Q9NZ08 941 aa24.37■■□□□ 1.49
SIX3-201ENST00000260653 KIF18AQ8NI77 898 aa24.37■■□□□ 1.49
SIX3-201ENST00000260653 ZBTB10Q96DT7 871 aa24.37■■□□□ 1.49
SIX3-201ENST00000260653 ZIC5Q96T25 663 aa24.37■■□□□ 1.49
SIX3-201ENST00000260653 MAPK13O15264 365 aa24.36■■□□□ 1.49
SIX3-201ENST00000260653 FANCGO15287 622 aa24.36■■□□□ 1.49
SIX3-201ENST00000260653 ADCY6O43306 1168 aa24.36■■□□□ 1.49
SIX3-201ENST00000260653 ZNF286BP0CG31 522 aa24.36■■□□□ 1.49
SIX3-201ENST00000260653 INHBEP58166 350 aa24.36■■□□□ 1.49
SIX3-201ENST00000260653 MYL7Q01449 175 aa24.36■■□□□ 1.49
SIX3-201ENST00000260653 STRN3Q13033 797 aa24.36■■□□□ 1.49
SIX3-201ENST00000260653 C1orf220Q5T0J3 134 aa24.36■■□□□ 1.49
SIX3-201ENST00000260653 CCDC170Q8IYT3 715 aa24.36■■□□□ 1.49
SIX3-201ENST00000260653 IGKV6-21A0A0C4DH24 114 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms