RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 RFX6Q8HWS3 928 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 CDCA7LQ96GN5 454 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 NR1H4Q96RI1 486 aaPredicted RBP4.31□□□□□ -1.72
RNF38-201ENST00000259605 CGRRF1Q99675 332 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 ZCCHC2Q9C0B9 1178 aaKnown RBP4.31□□□□□ -1.72
RNF38-201ENST00000259605 MIR1-1HGQ9H1L0 117 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 BRD9Q9H8M2 597 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 NEK6Q9HC98 313 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 AASDHPPTQ9NRN7 309 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 TYW1Q9NV66 732 aaKnown RBP4.31□□□□□ -1.72
RNF38-201ENST00000259605 PANK4Q9NVE7 773 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 SEPT3Q9UH03 358 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 PRR12Q9ULL5 1215 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 ORC6Q9Y5N6 252 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 BZW2Q9Y6E2 419 aaKnown RBP4.31□□□□□ -1.72
RNF38-201ENST00000259605 ITSN2Q9NZM3 1697 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 SPATA31A5Q5VU36 1347 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 SPATA31A7Q8IWB4 1347 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 LRRC14BA6NHZ5 514 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 TBKBP1A7MCY6 615 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 A8MXQ7 604 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 CASQ2O14958 399 aaPredicted RBP4.31□□□□□ -1.72
RNF38-201ENST00000259605 TIPRLO75663 272 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 SLC2A4P14672 509 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 KELP23276 732 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 INPP1P49441 399 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 GRIK4Q16099 956 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 HIST2H2ACQ16777 129 aaPredicted RBP4.31□□□□□ -1.72
RNF38-201ENST00000259605 HIST2H2AA3Q6FI13 130 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 RAPH1Q70E73 1250 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 NELFCDQ8IXH7 590 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 PHACTR4Q8IZ21 702 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 KRT78Q8N1N4 520 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 ZNF655Q8N720 491 aaPredicted RBP4.31□□□□□ -1.72
RNF38-201ENST00000259605 MCUQ8NE86 351 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 CDC26Q8NHZ8 85 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 GIPC2Q8TF65 315 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.31□□□□□ -1.72
RNF38-201ENST00000259605 KIF12Q96FN5 646 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 DCLK3Q9C098 648 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 RBSNQ9H1K0 784 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 COPS7BQ9H9Q2 264 aaPredicted RBP4.31□□□□□ -1.72
RNF38-201ENST00000259605 TUFT1Q9NNX1 390 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 DNAJC17Q9NVM6 304 aaKnown RBP4.31□□□□□ -1.72
RNF38-201ENST00000259605 PSD3Q9NYI0 1048 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 UTP11Q9Y3A2 253 aaKnown RBP4.31□□□□□ -1.72
RNF38-201ENST00000259605 MRPS23Q9Y3D9 190 aaKnown RBP4.31□□□□□ -1.72
RNF38-201ENST00000259605 ALG6Q9Y672 507 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 AOX1Q06278 1338 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 A0A088AWK7 358 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 CTAGE15A4D2H0 777 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 PDHXO00330 501 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 IFNB1P01574 187 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 CTAGE8P0CG41 777 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 ZNF10P21506 573 aaPredicted RBP4.31□□□□□ -1.72
RNF38-201ENST00000259605 GUCY2CP25092 1073 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 HTR1BP28222 390 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 TUFMP49411 452 aaKnown RBP4.31□□□□□ -1.72
RNF38-201ENST00000259605 PSMC5P62195 406 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 HPCAP84074 193 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 PFKPQ01813 784 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 TFDP2Q14188 446 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 PAN2Q504Q3 1202 aaKnown RBP4.31□□□□□ -1.72
RNF38-201ENST00000259605 HHATQ5VTY9 493 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 SFMBT2Q5VUG0 894 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 CTR9Q6PD62 1173 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 TMC6Q7Z403 805 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 SRLQ86TD4 932 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 CTAGE6Q86UF2 777 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 CTAGE4Q8IX94 777 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 PANX2Q96RD6 677 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 MEIS3Q99687 375 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 VCX3BQ9H321 246 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 PARVGQ9HBI0 331 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 POLMQ9NP87 494 aaPredicted RBP4.31□□□□□ -1.72
RNF38-201ENST00000259605 CHST12Q9NRB3 414 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 PRMT7Q9NVM4 692 aaPredicted RBP4.31□□□□□ -1.72
RNF38-201ENST00000259605 GDAQ9Y2T3 454 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 PRG3Q9Y2Y8 225 aaPredicted RBP4.31□□□□□ -1.72
RNF38-201ENST00000259605 SLC30A1Q9Y6M5 507 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 TNKSO95271 1327 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 POTEB3A0JP26 581 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 CTAGE9A4FU28 777 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 FAM47DPA6NHR8 397 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.31□□□□□ -1.72
RNF38-201ENST00000259605 H7C1W4 665 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 PLSCR1O15162 318 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 PSMD3O43242 534 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 PCDH8O95206 1070 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 ADCY5O95622 1261 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 HPGDP15428 266 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 ATP5JP18859 108 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 GARTP22102 1010 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 TBXAS1P24557 533 aaPredicted RBP4.31□□□□□ -1.72
RNF38-201ENST00000259605 GTF2E2P29084 291 aaKnown RBP4.31□□□□□ -1.72
RNF38-201ENST00000259605 PDE1AP54750 535 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 CTDSPL2Q05D32 466 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 USP4Q13107 963 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 PAK1Q13153 545 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 ZNF699Q32M78 642 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms