RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 MKNK1Q9BUB5 465 aa17.11■□□□□ 0.33
LRFN1-201ENST00000248668 GPR88Q9GZN0 384 aa17.11■□□□□ 0.33
LRFN1-201ENST00000248668 IGSF9BQ9UPX0 1349 aa17.11■□□□□ 0.33
LRFN1-201ENST00000248668 NR3C2P08235 984 aa17.11■□□□□ 0.33
LRFN1-201ENST00000248668 NLRX1Q86UT6 975 aa17.11■□□□□ 0.33
LRFN1-201ENST00000248668 CBWD2Q8IUF1 395 aa17.11■□□□□ 0.33
LRFN1-201ENST00000248668 ZNF280CQ8ND82 737 aa17.11■□□□□ 0.33
LRFN1-201ENST00000248668 ACCSQ96QU6 501 aa17.11■□□□□ 0.33
LRFN1-201ENST00000248668 STK33Q9BYT3 514 aa17.11■□□□□ 0.33
LRFN1-201ENST00000248668 EFCC1Q9HA90 598 aa17.11■□□□□ 0.33
LRFN1-201ENST00000248668 EPB41L5Q9HCM4 733 aa17.11■□□□□ 0.33
LRFN1-201ENST00000248668 TBC1D22BQ9NU19 505 aa17.11■□□□□ 0.33
LRFN1-201ENST00000248668 GABBR1Q9UBS5 961 aa17.11■□□□□ 0.33
LRFN1-201ENST00000248668 GTPBP10A4D1E9 387 aaKnown RBP17.11■□□□□ 0.33
LRFN1-201ENST00000248668 HEXIM1O94992 359 aaKnown RBP17.11■□□□□ 0.33
LRFN1-201ENST00000248668 PTPRAP18433 802 aa17.11■□□□□ 0.33
LRFN1-201ENST00000248668 MUTP22033 750 aa17.11■□□□□ 0.33
LRFN1-201ENST00000248668 VAMP7P51809 220 aa17.11■□□□□ 0.33
LRFN1-201ENST00000248668 TPCN2Q8NHX9 752 aa17.11■□□□□ 0.33
LRFN1-201ENST00000248668 KIF13BQ9NQT8 1826 aa17.1■□□□□ 0.33
LRFN1-201ENST00000248668 WDR64B1ANS9 1081 aa17.1■□□□□ 0.33
LRFN1-201ENST00000248668 ANKRD63C9JTQ0 380 aa17.1■□□□□ 0.33
LRFN1-201ENST00000248668 RNF40O75150 1001 aa17.1■□□□□ 0.33
LRFN1-201ENST00000248668 KIF4AO95239 1232 aa17.1■□□□□ 0.33
LRFN1-201ENST00000248668 CARSP49589 748 aaKnown RBP17.1■□□□□ 0.33
LRFN1-201ENST00000248668 MAP2K1Q02750 393 aaPredicted RBP17.1■□□□□ 0.33
LRFN1-201ENST00000248668 ANO5Q75V66 913 aa17.1■□□□□ 0.33
LRFN1-201ENST00000248668 PEX26Q7Z412 305 aa17.1■□□□□ 0.33
LRFN1-201ENST00000248668 ADAT2Q7Z6V5 191 aaKnown RBP17.1■□□□□ 0.33
LRFN1-201ENST00000248668 STRA6Q9BX79 667 aa17.1■□□□□ 0.33
LRFN1-201ENST00000248668 TSKSQ9UJT2 592 aa17.1■□□□□ 0.33
LRFN1-201ENST00000248668 GUCY2FP51841 1108 aa17.1■□□□□ 0.33
LRFN1-201ENST00000248668 PSMC5P62195 406 aa17.1■□□□□ 0.33
LRFN1-201ENST00000248668 NAA35Q5VZE5 725 aa17.1■□□□□ 0.33
LRFN1-201ENST00000248668 SCYL3Q8IZE3 742 aa17.1■□□□□ 0.33
LRFN1-201ENST00000248668 CEP170P1Q96L14 293 aa17.1■□□□□ 0.33
LRFN1-201ENST00000248668 INPP4AQ96PE3 977 aaPredicted RBP17.1■□□□□ 0.33
LRFN1-201ENST00000248668 TOPORSQ9NS56 1045 aaPredicted RBP17.1■□□□□ 0.33
LRFN1-201ENST00000248668 NFU1Q9UMS0 254 aa17.1■□□□□ 0.33
LRFN1-201ENST00000248668 ATAD5Q96QE3 1844 aa17.1■□□□□ 0.33
LRFN1-201ENST00000248668 SYF2O95926 243 aaKnown RBP17.09■□□□□ 0.33
LRFN1-201ENST00000248668 ADRB2P07550 413 aa17.09■□□□□ 0.33
LRFN1-201ENST00000248668 TNFAIP3P21580 790 aa17.09■□□□□ 0.33
LRFN1-201ENST00000248668 SWSAP1Q6NVH7 229 aa17.09■□□□□ 0.33
LRFN1-201ENST00000248668 GOLGA5Q8TBA6 731 aa17.09■□□□□ 0.33
LRFN1-201ENST00000248668 ARHGEF26Q96DR7 871 aa17.09■□□□□ 0.33
LRFN1-201ENST00000248668 ACBD3Q9H3P7 528 aa17.09■□□□□ 0.33
LRFN1-201ENST00000248668 FAM204AQ9H8W3 233 aa17.09■□□□□ 0.33
LRFN1-201ENST00000248668 XXYLT1Q8NBI6 393 aa17.09■□□□□ 0.33
LRFN1-201ENST00000248668 BSNDQ8WZ55 320 aa17.09■□□□□ 0.33
LRFN1-201ENST00000248668 GGA3Q9NZ52 723 aa17.09■□□□□ 0.33
LRFN1-201ENST00000248668 UBE4BO95155 1302 aa17.09■□□□□ 0.33
LRFN1-201ENST00000248668 RGPD3A6NKT7 1758 aaPredicted RBP17.09■□□□□ 0.33
LRFN1-201ENST00000248668 RGPD4Q7Z3J3 1758 aa17.09■□□□□ 0.33
LRFN1-201ENST00000248668 PRPF4BQ13523 1007 aaKnown RBP17.09■□□□□ 0.33
LRFN1-201ENST00000248668 TMEM132BQ14DG7 1078 aa17.09■□□□□ 0.33
LRFN1-201ENST00000248668 R3HDM1Q15032 1099 aaKnown RBP17.09■□□□□ 0.33
LRFN1-201ENST00000248668 METTL13Q8N6R0 699 aa17.09■□□□□ 0.33
LRFN1-201ENST00000248668 AENQ8WTP8 325 aaKnown RBP17.09■□□□□ 0.33
LRFN1-201ENST00000248668 TMEM206Q9H813 350 aa17.09■□□□□ 0.33
LRFN1-201ENST00000248668 DBR1Q9UK59 544 aaKnown RBP17.09■□□□□ 0.33
LRFN1-201ENST00000248668 FER1L6Q2WGJ9 1857 aa17.09■□□□□ 0.33
LRFN1-201ENST00000248668 DENND3A2RUS2 1198 aa17.08■□□□□ 0.33
LRFN1-201ENST00000248668 ZNF862O60290 1169 aa17.08■□□□□ 0.33
LRFN1-201ENST00000248668 PPP2R5AQ15172 486 aa17.08■□□□□ 0.33
LRFN1-201ENST00000248668 NIPA1Q7RTP0 329 aa17.08■□□□□ 0.33
LRFN1-201ENST00000248668 PPM1KQ8N3J5 372 aa17.08■□□□□ 0.33
LRFN1-201ENST00000248668 LRRC57Q8N9N7 239 aa17.08■□□□□ 0.33
LRFN1-201ENST00000248668 TSEN2Q8NCE0 465 aaKnown RBP17.08■□□□□ 0.33
LRFN1-201ENST00000248668 SLC35G2Q8TBE7 412 aa17.08■□□□□ 0.33
LRFN1-201ENST00000248668 THAP2Q9H0W7 228 aa17.08■□□□□ 0.33
LRFN1-201ENST00000248668 TMEM110-MUSTN1A8MSY1 372 aa17.08■□□□□ 0.32
LRFN1-201ENST00000248668 CALCAP01258 141 aa17.08■□□□□ 0.32
LRFN1-201ENST00000248668 FAM153BP0C7A2 387 aa17.08■□□□□ 0.32
LRFN1-201ENST00000248668 NPTX2P47972 431 aa17.08■□□□□ 0.32
LRFN1-201ENST00000248668 FAM153CQ494X1 144 aa17.08■□□□□ 0.32
LRFN1-201ENST00000248668 ZNF572Q7Z3I7 529 aaPredicted RBP17.08■□□□□ 0.32
LRFN1-201ENST00000248668 OLIG1Q8TAK6 271 aa17.08■□□□□ 0.32
LRFN1-201ENST00000248668 FAM153AQ9UHL3 310 aa17.08■□□□□ 0.32
LRFN1-201ENST00000248668 FBXL5Q9UKA1 691 aa17.08■□□□□ 0.32
LRFN1-201ENST00000248668 RRP15Q9Y3B9 282 aaKnown RBP17.08■□□□□ 0.32
LRFN1-201ENST00000248668 RAD51CO43502 376 aa17.08■□□□□ 0.32
LRFN1-201ENST00000248668 BUB1BO60566 1050 aaPredicted RBP17.08■□□□□ 0.32
LRFN1-201ENST00000248668 NFIL3Q16649 462 aa17.08■□□□□ 0.32
LRFN1-201ENST00000248668 C1orf220Q5T0J3 134 aa17.08■□□□□ 0.32
LRFN1-201ENST00000248668 DCAF15Q66K64 600 aa17.08■□□□□ 0.32
LRFN1-201ENST00000248668 INTS8Q75QN2 995 aaKnown RBP17.08■□□□□ 0.32
LRFN1-201ENST00000248668 SEPT9Q9UHD8 586 aaPredicted RBP17.08■□□□□ 0.32
LRFN1-201ENST00000248668 GOLGA6BA6NDN3 693 aa17.07■□□□□ 0.32
LRFN1-201ENST00000248668 RGS20O76081 388 aa17.07■□□□□ 0.32
LRFN1-201ENST00000248668 DLATP10515 647 aaKnown RBP17.07■□□□□ 0.32
LRFN1-201ENST00000248668 RPS12P25398 132 aaKnown RBP17.07■□□□□ 0.32
LRFN1-201ENST00000248668 CCND2P30279 289 aa17.07■□□□□ 0.32
LRFN1-201ENST00000248668 ADSSP30520 456 aa17.07■□□□□ 0.32
LRFN1-201ENST00000248668 MXI1P50539 228 aa17.07■□□□□ 0.32
LRFN1-201ENST00000248668 PPARDQ03181 441 aa17.07■□□□□ 0.32
LRFN1-201ENST00000248668 FSTL1Q12841 308 aa17.07■□□□□ 0.32
LRFN1-201ENST00000248668 C10orf76Q5T2E6 689 aa17.07■□□□□ 0.32
LRFN1-201ENST00000248668 C4orf19Q8IY42 314 aa17.07■□□□□ 0.32
LRFN1-201ENST00000248668 LMO3Q8TAP4 145 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms