RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 ZNF131P52739 623 aa16.94■□□□□ 0.3
SIN3B-201ENST00000248054 BFSP1Q12934 665 aa16.94■□□□□ 0.3
SIN3B-201ENST00000248054 ALS2CLQ60I27 953 aa16.94■□□□□ 0.3
SIN3B-201ENST00000248054 GPD1LQ8N335 351 aa16.94■□□□□ 0.3
SIN3B-201ENST00000248054 HNRNPH1P31943 449 aaKnown RBP16.94■□□□□ 0.3
SIN3B-201ENST00000248054 GUCY2FP51841 1108 aa16.94■□□□□ 0.3
SIN3B-201ENST00000248054 ACTN3Q08043 901 aaPredicted RBP16.94■□□□□ 0.3
SIN3B-201ENST00000248054 SPDYE2Q495Y8 402 aa16.94■□□□□ 0.3
SIN3B-201ENST00000248054 Q4G0T1 1027 aa16.94■□□□□ 0.3
SIN3B-201ENST00000248054 DACT2Q5SW24 774 aa16.94■□□□□ 0.3
SIN3B-201ENST00000248054 RINT1Q6NUQ1 792 aa16.94■□□□□ 0.3
SIN3B-201ENST00000248054 HACL1Q9UJ83 578 aa16.94■□□□□ 0.3
SIN3B-201ENST00000248054 AFDNP55196 1824 aaKnown RBP16.94■□□□□ 0.3
SIN3B-201ENST00000248054 ZBTB33Q86T24 672 aa16.93■□□□□ 0.3
SIN3B-201ENST00000248054 NSMCE1Q8WV22 266 aa16.93■□□□□ 0.3
SIN3B-201ENST00000248054 NBPF3Q9H094 633 aa16.93■□□□□ 0.3
SIN3B-201ENST00000248054 KBTBD4Q9NVX7 518 aa16.93■□□□□ 0.3
SIN3B-201ENST00000248054 CA8P35219 290 aa16.93■□□□□ 0.3
SIN3B-201ENST00000248054 PSMC4P43686 418 aa16.93■□□□□ 0.3
SIN3B-201ENST00000248054 GRIN1Q05586 938 aa16.93■□□□□ 0.3
SIN3B-201ENST00000248054 ARHGEF2Q92974 986 aaKnown RBP16.93■□□□□ 0.3
SIN3B-201ENST00000248054 PHLPP1O60346 1717 aa16.93■□□□□ 0.3
SIN3B-201ENST00000248054 H3BQF6 201 aa16.93■□□□□ 0.3
SIN3B-201ENST00000248054 PLS3P13797 630 aa16.93■□□□□ 0.3
SIN3B-201ENST00000248054 SYT2Q8N9I0 419 aaPredicted RBP16.93■□□□□ 0.3
SIN3B-201ENST00000248054 NLRP4Q96MN2 994 aa16.93■□□□□ 0.3
SIN3B-201ENST00000248054 NPM3O75607 178 aaKnown RBP16.93■□□□□ 0.3
SIN3B-201ENST00000248054 HEXIM1O94992 359 aaKnown RBP16.93■□□□□ 0.3
SIN3B-201ENST00000248054 FTCDO95954 541 aa16.93■□□□□ 0.3
SIN3B-201ENST00000248054 TRIM50Q86XT4 487 aa16.93■□□□□ 0.3
SIN3B-201ENST00000248054 SNX25Q9H3E2 840 aa16.93■□□□□ 0.3
SIN3B-201ENST00000248054 RGPD1P0DJD0 1748 aa16.93■□□□□ 0.3
SIN3B-201ENST00000248054 ZKSCAN8Q15776 578 aaPredicted RBP16.92■□□□□ 0.3
SIN3B-201ENST00000248054 ZNF667Q5HYK9 610 aa16.92■□□□□ 0.3
SIN3B-201ENST00000248054 WHAMMQ8TF30 809 aa16.92■□□□□ 0.3
SIN3B-201ENST00000248054 CAPN9O14815 690 aa16.92■□□□□ 0.3
SIN3B-201ENST00000248054 GRIN3BO60391 1043 aa16.92■□□□□ 0.3
SIN3B-201ENST00000248054 PHLDB3Q6NSJ2 640 aa16.92■□□□□ 0.3
SIN3B-201ENST00000248054 TRIM72Q6ZMU5 477 aa16.92■□□□□ 0.3
SIN3B-201ENST00000248054 DDTLA6NHG4 134 aaPredicted RBP16.92■□□□□ 0.3
SIN3B-201ENST00000248054 RFC5P40937 340 aa16.92■□□□□ 0.3
SIN3B-201ENST00000248054 GCLMP48507 274 aa16.92■□□□□ 0.3
SIN3B-201ENST00000248054 GPC5P78333 572 aa16.92■□□□□ 0.3
SIN3B-201ENST00000248054 SF3A3Q12874 501 aaKnown RBP eCLIP16.92■□□□□ 0.32e-6■■□□□ 13.7
SIN3B-201ENST00000248054 CNOT10Q9H9A5 744 aaKnown RBP16.92■□□□□ 0.3
SIN3B-201ENST00000248054 FGRP09769 529 aa16.92■□□□□ 0.3
SIN3B-201ENST00000248054 ELF1P32519 619 aa16.92■□□□□ 0.3
SIN3B-201ENST00000248054 CDC42EP1Q00587 391 aa16.92■□□□□ 0.3
SIN3B-201ENST00000248054 LRRC31Q6UY01 552 aa16.92■□□□□ 0.3
SIN3B-201ENST00000248054 C17orf75Q9HAS0 396 aa16.92■□□□□ 0.3
SIN3B-201ENST00000248054 TOPORSQ9NS56 1045 aaPredicted RBP16.92■□□□□ 0.3
SIN3B-201ENST00000248054 GRID2IPA4D2P6 1211 aa16.91■□□□□ 0.3
SIN3B-201ENST00000248054 SASH3O75995 380 aa16.91■□□□□ 0.3
SIN3B-201ENST00000248054 APOBEC3HQ6NTF7 200 aaKnown RBP16.91■□□□□ 0.3
SIN3B-201ENST00000248054 EVI5O60447 810 aa16.91■□□□□ 0.3
SIN3B-201ENST00000248054 MARK3P27448 753 aa16.91■□□□□ 0.3
SIN3B-201ENST00000248054 SNAPC2Q13487 334 aa16.91■□□□□ 0.3
SIN3B-201ENST00000248054 CUL1Q13616 776 aa16.91■□□□□ 0.3
SIN3B-201ENST00000248054 FOXR1Q6PIV2 292 aa16.91■□□□□ 0.3
SIN3B-201ENST00000248054 RASGRP2Q7LDG7 609 aa16.91■□□□□ 0.3
SIN3B-201ENST00000248054 SMC1BQ8NDV3 1235 aa16.91■□□□□ 0.3
SIN3B-201ENST00000248054 FAM193BQ96PV7 902 aaPredicted RBP16.91■□□□□ 0.3
SIN3B-201ENST00000248054 MOV10L1Q9BXT6 1211 aaKnown RBP16.91■□□□□ 0.3
SIN3B-201ENST00000248054 VPS37BQ9H9H4 285 aa16.91■□□□□ 0.3
SIN3B-201ENST00000248054 SYNGAP1Q96PV0 1343 aa16.91■□□□□ 0.3
SIN3B-201ENST00000248054 P4HA2O15460 535 aa16.91■□□□□ 0.3
SIN3B-201ENST00000248054 MYBL1P10243 752 aa16.91■□□□□ 0.3
SIN3B-201ENST00000248054 RNASELQ05823 741 aaKnown RBP16.91■□□□□ 0.3
SIN3B-201ENST00000248054 GRB10Q13322 594 aa16.91■□□□□ 0.3
SIN3B-201ENST00000248054 ERGIC2Q96RQ1 377 aa16.91■□□□□ 0.3
SIN3B-201ENST00000248054 ZNF148Q9UQR1 794 aa16.91■□□□□ 0.3
SIN3B-201ENST00000248054 DISP2A7MBM2 1401 aa16.91■□□□□ 0.3
SIN3B-201ENST00000248054 LUC7L3O95232 432 aaKnown RBP16.91■□□□□ 0.3
SIN3B-201ENST00000248054 SOX5P35711 763 aa16.91■□□□□ 0.3
SIN3B-201ENST00000248054 STAT5BP51692 787 aa16.91■□□□□ 0.3
SIN3B-201ENST00000248054 RWDD2BP57060 319 aa16.91■□□□□ 0.3
SIN3B-201ENST00000248054 DRAP1Q14919 205 aaPredicted RBP16.91■□□□□ 0.3
SIN3B-201ENST00000248054 SCYL2Q6P3W7 929 aa16.91■□□□□ 0.3
SIN3B-201ENST00000248054 METTL23Q86XA0 190 aa16.91■□□□□ 0.3
SIN3B-201ENST00000248054 DPH5Q9H2P9 285 aa16.91■□□□□ 0.3
SIN3B-201ENST00000248054 ECEL1O95672 775 aa16.9■□□□□ 0.3
SIN3B-201ENST00000248054 GGCXP38435 758 aa16.9■□□□□ 0.3
SIN3B-201ENST00000248054 MAP7Q14244 749 aa16.9■□□□□ 0.3
SIN3B-201ENST00000248054 ZNF746Q6NUN9 644 aaPredicted RBP16.9■□□□□ 0.3
SIN3B-201ENST00000248054 EMBQ6PCB8 327 aa16.9■□□□□ 0.3
SIN3B-201ENST00000248054 SDCCAG8Q86SQ7 713 aaPredicted RBP16.9■□□□□ 0.3
SIN3B-201ENST00000248054 TMEM35BQ8NCS4 154 aa16.9■□□□□ 0.3
SIN3B-201ENST00000248054 SPATA33Q96N06 139 aa16.9■□□□□ 0.3
SIN3B-201ENST00000248054 FAM213AQ9BRX8 229 aa16.9■□□□□ 0.3
SIN3B-201ENST00000248054 TACO1Q9BSH4 297 aaKnown RBP16.9■□□□□ 0.3
SIN3B-201ENST00000248054 A6NJR5 290 aa16.9■□□□□ 0.3
SIN3B-201ENST00000248054 SLC37A4O43826 429 aa16.9■□□□□ 0.3
SIN3B-201ENST00000248054 ARL1P40616 181 aaPredicted RBP16.9■□□□□ 0.3
SIN3B-201ENST00000248054 VSNL1P62760 191 aa16.9■□□□□ 0.3
SIN3B-201ENST00000248054 SGO2Q562F6 1265 aa16.9■□□□□ 0.3
SIN3B-201ENST00000248054 ANKRD13AQ8IZ07 590 aa16.9■□□□□ 0.3
SIN3B-201ENST00000248054 FBXL13Q8NEE6 735 aa16.9■□□□□ 0.3
SIN3B-201ENST00000248054 SYN2Q92777 582 aaPredicted RBP16.9■□□□□ 0.3
SIN3B-201ENST00000248054 NXF1Q9UBU9 619 aaKnown RBP16.9■□□□□ 0.3
SIN3B-201ENST00000248054 NUB1Q9Y5A7 615 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms