RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 OPHN1O60890 802 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 AKAP3O75969 853 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 MYL1P05976 194 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 GLI1P08151 1106 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 POTEJP0CG39 1038 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 ARP10275 920 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 SKIP12755 728 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 PHLDB3Q6NSJ2 640 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 DEFB132Q7Z7B7 95 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 ELOA2Q8IYF1 753 aaPredicted RBP12.41□□□□□ -0.42
SOX9-201ENST00000245479 MIPOL1Q8TD10 442 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 RUNDC3BQ96NL0 473 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 TXLNGQ9NUQ3 528 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 ANKFY1Q9P2R3 1169 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 CNTNAP4Q9C0A0 1308 aa12.4□□□□□ -0.42
SOX9-201ENST00000245479 RASSF10A6NK89 507 aa12.4□□□□□ -0.42
SOX9-201ENST00000245479 CHN1P15882 459 aa12.4□□□□□ -0.42
SOX9-201ENST00000245479 CDC25CP30307 473 aa12.4□□□□□ -0.42
SOX9-201ENST00000245479 RWDD2BP57060 319 aa12.4□□□□□ -0.42
SOX9-201ENST00000245479 SLC8A3P57103 927 aa12.4□□□□□ -0.42
SOX9-201ENST00000245479 SKOR1P84550 965 aa12.4□□□□□ -0.42
SOX9-201ENST00000245479 SMAD1Q15797 465 aaKnown RBP12.4□□□□□ -0.42
SOX9-201ENST00000245479 KAZNQ674X7 775 aa12.4□□□□□ -0.42
SOX9-201ENST00000245479 TRPM8Q7Z2W7 1104 aa12.4□□□□□ -0.42
SOX9-201ENST00000245479 RAPGEF5Q92565 580 aa12.4□□□□□ -0.42
SOX9-201ENST00000245479 TRIM51Q9BSJ1 452 aa12.4□□□□□ -0.42
SOX9-201ENST00000245479 CUEDC2Q9H467 287 aa12.4□□□□□ -0.42
SOX9-201ENST00000245479 DDX20Q9UHI6 824 aaKnown RBP12.4□□□□□ -0.42
SOX9-201ENST00000245479 DNAJC12Q9UKB3 198 aa12.4□□□□□ -0.42
SOX9-201ENST00000245479 HSD17B3P37058 310 aa12.4□□□□□ -0.42
SOX9-201ENST00000245479 PDXDC1Q6P996 788 aa12.4□□□□□ -0.42
SOX9-201ENST00000245479 CDR2LQ86X02 465 aaPredicted RBP12.4□□□□□ -0.42
SOX9-201ENST00000245479 PI4K2AQ9BTU6 479 aa12.4□□□□□ -0.42
SOX9-201ENST00000245479 HEMGNQ9BXL5 484 aa12.4□□□□□ -0.42
SOX9-201ENST00000245479 DCCP43146 1447 aa12.4□□□□□ -0.43
SOX9-201ENST00000245479 MSH4O15457 936 aa12.4□□□□□ -0.43
SOX9-201ENST00000245479 ACSL3O95573 720 aa12.4□□□□□ -0.43
SOX9-201ENST00000245479 GNA14O95837 355 aa12.4□□□□□ -0.43
SOX9-201ENST00000245479 TNNI1P19237 187 aa12.4□□□□□ -0.43
SOX9-201ENST00000245479 ADCY2Q08462 1091 aa12.4□□□□□ -0.43
SOX9-201ENST00000245479 SYCP2LQ5T4T6 812 aa12.4□□□□□ -0.43
SOX9-201ENST00000245479 STXBP4Q6ZWJ1 553 aa12.4□□□□□ -0.43
SOX9-201ENST00000245479 ZC3H18Q86VM9 953 aaKnown RBP12.4□□□□□ -0.43
SOX9-201ENST00000245479 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.4□□□□□ -0.43
SOX9-201ENST00000245479 JDP2Q8WYK2 163 aa12.4□□□□□ -0.43
SOX9-201ENST00000245479 VCX3BQ9H321 246 aa12.4□□□□□ -0.43
SOX9-201ENST00000245479 VCX3AQ9NNX9 186 aa12.4□□□□□ -0.43
SOX9-201ENST00000245479 GRID2IPA4D2P6 1211 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 MYBL1P10243 752 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 ITGA4P13612 1032 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 NPR1P16066 1061 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 MSH2P43246 934 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 KCNJ1P48048 391 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 MAP7Q14244 749 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 CC2D2BQ6DHV5 1058 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 ARHGAP24Q8N264 748 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 CASKIN2Q8WXE0 1202 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 PAGR1Q9BTK6 254 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 SCN11AQ9UI33 1791 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 UCHL3P15374 230 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 PBX1P40424 430 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 DRAP1Q14919 205 aaPredicted RBP12.39□□□□□ -0.43
SOX9-201ENST00000245479 KNOP1Q1ED39 458 aaKnown RBP12.39□□□□□ -0.43
SOX9-201ENST00000245479 ANKRD20A8PQ5CZ79 823 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 DLK2Q6UY11 383 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 LONP2Q86WA8 852 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 SPDYE1Q8NFV5 336 aaPredicted RBP12.39□□□□□ -0.43
SOX9-201ENST00000245479 GLG1Q92896 1179 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 CEP63Q96MT8 703 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 DNAJC7Q99615 494 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 PRMT1Q99873 361 aaKnown RBP12.39□□□□□ -0.43
SOX9-201ENST00000245479 MAGEF1Q9HAY2 307 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 TROVE2P10155 538 aaKnown RBP eCLIP12.39□□□□□ -0.434e-9■□□□□ 8.5
SOX9-201ENST00000245479 MARK3P27448 753 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 JAG1P78504 1218 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 IL9RQ01113 521 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 DAB2IPQ5VWQ8 1189 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 SAMD7Q7Z3H4 446 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 ZNF507Q8TCN5 953 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 HAUS1Q96CS2 278 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 LBHD1Q9BQE6 289 aaPredicted RBP12.39□□□□□ -0.43
SOX9-201ENST00000245479 LXNQ9BS40 222 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 PLAGL2Q9UPG8 496 aa12.39□□□□□ -0.43
SOX9-201ENST00000245479 POLRMTO00411 1230 aaKnown RBP12.38□□□□□ -0.43
SOX9-201ENST00000245479 GAS8O95995 478 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 AMPD2Q01433 879 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 LRRC63Q05C16 580 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 SPP2Q13103 211 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 RC3H1Q5TC82 1133 aaKnown RBP12.38□□□□□ -0.43
SOX9-201ENST00000245479 LRIG3Q6UXM1 1119 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 SP8Q8IXZ3 490 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 CFAP61Q8NHU2 1237 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 MASTLQ96GX5 879 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 PITPNM3Q9BZ71 974 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 KLHL11Q9NVR0 708 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 TRPC6Q9Y210 931 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 NOC2LQ9Y3T9 749 aaKnown RBP12.38□□□□□ -0.43
SOX9-201ENST00000245479 MYH13Q9UKX3 1938 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 TTI1O43156 1089 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 ATP6V1G2O95670 118 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms