RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 GIT2Q14161 759 aa18.59■□□□□ 0.57
CDKN1A-201ENST00000244741 GPR161Q8N6U8 529 aaKnown RBP18.59■□□□□ 0.57
CDKN1A-201ENST00000244741 KIAA0895Q8NCT3 520 aa18.59■□□□□ 0.57
CDKN1A-201ENST00000244741 ATP8B4Q8TF62 1192 aa18.59■□□□□ 0.57
CDKN1A-201ENST00000244741 DNAJC7Q99615 494 aa18.59■□□□□ 0.57
CDKN1A-201ENST00000244741 GTPBP4Q9BZE4 634 aaKnown RBP18.59■□□□□ 0.57
CDKN1A-201ENST00000244741 SPC25Q9HBM1 224 aa18.59■□□□□ 0.57
CDKN1A-201ENST00000244741 NRBP2Q9NSY0 501 aa18.59■□□□□ 0.57
CDKN1A-201ENST00000244741 ANKEF1Q9NU02 776 aa18.59■□□□□ 0.57
CDKN1A-201ENST00000244741 REXO2Q9Y3B8 237 aaKnown RBP18.59■□□□□ 0.57
CDKN1A-201ENST00000244741 EPN1Q9Y6I3 576 aaPredicted RBP18.59■□□□□ 0.57
CDKN1A-201ENST00000244741 BICDL2A1A5D9 508 aa18.59■□□□□ 0.57
CDKN1A-201ENST00000244741 HOXD8P13378 290 aaPredicted RBP18.59■□□□□ 0.57
CDKN1A-201ENST00000244741 KIAA0753Q2KHM9 967 aa18.59■□□□□ 0.57
CDKN1A-201ENST00000244741 BRDTQ58F21 947 aaPredicted RBP18.59■□□□□ 0.57
CDKN1A-201ENST00000244741 LHX8Q68G74 356 aa18.59■□□□□ 0.57
CDKN1A-201ENST00000244741 TMCO3Q6UWJ1 677 aa18.59■□□□□ 0.57
CDKN1A-201ENST00000244741 ZBTB42B2RXF5 422 aa18.58■□□□□ 0.57
CDKN1A-201ENST00000244741 PNMA6AP0CW24 399 aaPredicted RBP18.58■□□□□ 0.57
CDKN1A-201ENST00000244741 KCNA10Q16322 511 aa18.58■□□□□ 0.57
CDKN1A-201ENST00000244741 WDR59Q6PJI9 974 aa18.58■□□□□ 0.57
CDKN1A-201ENST00000244741 BBXQ8WY36 941 aaPredicted RBP18.58■□□□□ 0.57
CDKN1A-201ENST00000244741 CNOT6LQ96LI5 555 aaKnown RBP18.58■□□□□ 0.57
CDKN1A-201ENST00000244741 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.58■□□□□ 0.578e-7■■■■□ 22.7
CDKN1A-201ENST00000244741 RNF208Q9H0X6 261 aa18.58■□□□□ 0.57
CDKN1A-201ENST00000244741 SEMA6BQ9H3T3 888 aa18.58■□□□□ 0.57
CDKN1A-201ENST00000244741 SLC39A2Q9NP94 309 aa18.58■□□□□ 0.57
CDKN1A-201ENST00000244741 CDC23Q9UJX2 597 aa18.58■□□□□ 0.57
CDKN1A-201ENST00000244741 CTAGE9A4FU28 777 aa18.58■□□□□ 0.56
CDKN1A-201ENST00000244741 HIP1RO75146 1068 aa18.58■□□□□ 0.56
CDKN1A-201ENST00000244741 SEC31AO94979 1220 aaKnown RBP18.58■□□□□ 0.56
CDKN1A-201ENST00000244741 NDUFA10O95299 355 aa18.58■□□□□ 0.56
CDKN1A-201ENST00000244741 INSRRP14616 1297 aa18.58■□□□□ 0.56
CDKN1A-201ENST00000244741 PURAQ00577 322 aaKnown RBP18.58■□□□□ 0.56
CDKN1A-201ENST00000244741 FAM102BQ5T8I3 360 aa18.58■□□□□ 0.56
CDKN1A-201ENST00000244741 CNNM4Q6P4Q7 775 aa18.58■□□□□ 0.56
CDKN1A-201ENST00000244741 RABGGTAQ92696 567 aa18.58■□□□□ 0.56
CDKN1A-201ENST00000244741 GOLGA1Q92805 767 aa18.58■□□□□ 0.56
CDKN1A-201ENST00000244741 DEFB118Q96PH6 123 aa18.58■□□□□ 0.56
CDKN1A-201ENST00000244741 PANK4Q9NVE7 773 aa18.58■□□□□ 0.56
CDKN1A-201ENST00000244741 PRDM4Q9UKN5 801 aa18.58■□□□□ 0.56
CDKN1A-201ENST00000244741 ASGR1P07306 291 aa18.57■□□□□ 0.56
CDKN1A-201ENST00000244741 KLK7P49862 253 aa18.57■□□□□ 0.56
CDKN1A-201ENST00000244741 POLGP54098 1239 aaPredicted RBP18.57■□□□□ 0.56
CDKN1A-201ENST00000244741 TBC1D8BQ0IIM8 1120 aa18.57■□□□□ 0.56
CDKN1A-201ENST00000244741 SRGAP1Q7Z6B7 1085 aa18.57■□□□□ 0.56
CDKN1A-201ENST00000244741 GLIS3Q8NEA6 775 aa18.57■□□□□ 0.56
CDKN1A-201ENST00000244741 TMEM143Q96AN5 459 aa18.57■□□□□ 0.56
CDKN1A-201ENST00000244741 NIFKQ9BYG3 293 aaKnown RBP18.57■□□□□ 0.56
CDKN1A-201ENST00000244741 PARD6BQ9BYG5 372 aa18.57■□□□□ 0.56
CDKN1A-201ENST00000244741 UPF3AQ9H1J1 476 aaKnown RBP18.57■□□□□ 0.56
CDKN1A-201ENST00000244741 SETD4Q9NVD3 440 aa18.57■□□□□ 0.56
CDKN1A-201ENST00000244741 CCL5P13501 91 aa18.57■□□□□ 0.56
CDKN1A-201ENST00000244741 MFSD10Q14728 455 aa18.57■□□□□ 0.56
CDKN1A-201ENST00000244741 COBLL1Q53SF7 1204 aa18.57■□□□□ 0.56
CDKN1A-201ENST00000244741 LRRC71Q8N4P6 559 aa18.57■□□□□ 0.56
CDKN1A-201ENST00000244741 KCTD17Q8N5Z5 321 aa18.57■□□□□ 0.56
CDKN1A-201ENST00000244741 FAM167AQ96KS9 214 aa18.57■□□□□ 0.56
CDKN1A-201ENST00000244741 CEP89Q96ST8 783 aa18.57■□□□□ 0.56
CDKN1A-201ENST00000244741 FGFBP2Q9BYJ0 223 aa18.57■□□□□ 0.56
CDKN1A-201ENST00000244741 TTYH3Q9C0H2 523 aa18.57■□□□□ 0.56
CDKN1A-201ENST00000244741 LRRC27Q9C0I9 530 aa18.57■□□□□ 0.56
CDKN1A-201ENST00000244741 SUGCTQ9HAC7 445 aa18.57■□□□□ 0.56
CDKN1A-201ENST00000244741 ST7Q9NRC1 585 aa18.57■□□□□ 0.56
CDKN1A-201ENST00000244741 AGPAT5Q9NUQ2 364 aa18.57■□□□□ 0.56
CDKN1A-201ENST00000244741 PUF60Q9UHX1 559 aaKnown RBP18.57■□□□□ 0.56
CDKN1A-201ENST00000244741 F2P00734 622 aa18.56■□□□□ 0.56
CDKN1A-201ENST00000244741 PPP1R2P41236 205 aa18.56■□□□□ 0.56
CDKN1A-201ENST00000244741 MTIF2P46199 727 aaKnown RBP18.56■□□□□ 0.56
CDKN1A-201ENST00000244741 SLC26A2P50443 739 aa18.56■□□□□ 0.56
CDKN1A-201ENST00000244741 COASYQ13057 564 aa18.56■□□□□ 0.56
CDKN1A-201ENST00000244741 DRP2Q13474 957 aa18.56■□□□□ 0.56
CDKN1A-201ENST00000244741 LRRC41Q15345 812 aa18.56■□□□□ 0.56
CDKN1A-201ENST00000244741 TARBP2Q15633 366 aaKnown RBP18.56■□□□□ 0.56
CDKN1A-201ENST00000244741 HERC4Q5GLZ8 1057 aaPredicted RBP18.56■□□□□ 0.56
CDKN1A-201ENST00000244741 MIIPQ5JXC2 388 aa18.56■□□□□ 0.56
CDKN1A-201ENST00000244741 DAW1Q8N136 415 aa18.56■□□□□ 0.56
CDKN1A-201ENST00000244741 XPNPEP1Q9NQW7 623 aa18.56■□□□□ 0.56
CDKN1A-201ENST00000244741 TRIM10Q9UDY6 481 aa18.56■□□□□ 0.56
CDKN1A-201ENST00000244741 HBP1O60381 514 aa18.55■□□□□ 0.56
CDKN1A-201ENST00000244741 TBCAO75347 108 aaKnown RBP18.55■□□□□ 0.56
CDKN1A-201ENST00000244741 TFRCP02786 760 aaKnown RBP18.55■□□□□ 0.56
CDKN1A-201ENST00000244741 PSEN2P49810 448 aa18.55■□□□□ 0.56
CDKN1A-201ENST00000244741 GABPB1Q06547 395 aaPredicted RBP18.55■□□□□ 0.56
CDKN1A-201ENST00000244741 EMC2Q15006 297 aa18.55■□□□□ 0.56
CDKN1A-201ENST00000244741 CENPPQ6IPU0 288 aa18.55■□□□□ 0.56
CDKN1A-201ENST00000244741 FBXO46Q6PJ61 603 aaPredicted RBP18.55■□□□□ 0.56
CDKN1A-201ENST00000244741 UNC13DQ70J99 1090 aa18.55■□□□□ 0.56
CDKN1A-201ENST00000244741 FAM114A1Q8IWE2 563 aa18.55■□□□□ 0.56
CDKN1A-201ENST00000244741 MYCT1Q8N699 235 aa18.55■□□□□ 0.56
CDKN1A-201ENST00000244741 METTL13Q8N6R0 699 aa18.55■□□□□ 0.56
CDKN1A-201ENST00000244741 PLA2G4AP47712 749 aa18.55■□□□□ 0.56
CDKN1A-201ENST00000244741 ZNF200P98182 395 aaPredicted RBP18.55■□□□□ 0.56
CDKN1A-201ENST00000244741 PPFIA1Q13136 1202 aa18.55■□□□□ 0.56
CDKN1A-201ENST00000244741 HIC1Q14526 733 aa18.55■□□□□ 0.56
CDKN1A-201ENST00000244741 TSR1Q2NL82 804 aaKnown RBP18.55■□□□□ 0.56
CDKN1A-201ENST00000244741 SFR1Q86XK3 245 aa18.55■□□□□ 0.56
CDKN1A-201ENST00000244741 KLHDC9Q8NEP7 349 aa18.55■□□□□ 0.56
CDKN1A-201ENST00000244741 VTI1AQ96AJ9 217 aa18.55■□□□□ 0.56
CDKN1A-201ENST00000244741 ZNF668Q96K58 619 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms