RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 WNT8AQ9H1J5 351 aa11.22□□□□□ -0.61
HMGCL-201ENST00000235958 NUP62CLQ9H1M0 184 aa11.22□□□□□ -0.61
HMGCL-201ENST00000235958 MINDY3Q9H8M7 445 aa11.22□□□□□ -0.61
HMGCL-201ENST00000235958 AGO3Q9H9G7 860 aaKnown RBP11.22□□□□□ -0.61
HMGCL-201ENST00000235958 MRPL44Q9H9J2 332 aaKnown RBP11.22□□□□□ -0.61
HMGCL-201ENST00000235958 KIAA1468Q9P260 1216 aa11.22□□□□□ -0.61
HMGCL-201ENST00000235958 NOC2LQ9Y3T9 749 aaKnown RBP11.22□□□□□ -0.61
HMGCL-201ENST00000235958 NR2E3Q9Y5X4 410 aa11.22□□□□□ -0.61
HMGCL-201ENST00000235958 SQORQ9Y6N5 450 aa11.22□□□□□ -0.61
HMGCL-201ENST00000235958 CEP290O15078 2479 aa11.21□□□□□ -0.61
HMGCL-201ENST00000235958 INO80B-WBP1J3KQ70 363 aa11.21□□□□□ -0.61
HMGCL-201ENST00000235958 NBNO60934 754 aa11.21□□□□□ -0.61
HMGCL-201ENST00000235958 PARNO95453 639 aaKnown RBP11.21□□□□□ -0.61
HMGCL-201ENST00000235958 MAPTP10636 758 aaKnown RBP11.21□□□□□ -0.61
HMGCL-201ENST00000235958 GHRP10912 638 aa11.21□□□□□ -0.61
HMGCL-201ENST00000235958 SYN1P17600 705 aa11.21□□□□□ -0.61
HMGCL-201ENST00000235958 FGFR4P22455 802 aa11.21□□□□□ -0.61
HMGCL-201ENST00000235958 EFNA5P52803 228 aa11.21□□□□□ -0.61
HMGCL-201ENST00000235958 MLLT1Q03111 559 aaPredicted RBP11.21□□□□□ -0.61
HMGCL-201ENST00000235958 EHHADHQ08426 723 aa11.21□□□□□ -0.61
HMGCL-201ENST00000235958 STK4Q13043 487 aa11.21□□□□□ -0.61
HMGCL-201ENST00000235958 LPIN1Q14693 890 aa11.21□□□□□ -0.61
HMGCL-201ENST00000235958 KCNB1Q14721 858 aa11.21□□□□□ -0.61
HMGCL-201ENST00000235958 KLHL40Q2TBA0 621 aa11.21□□□□□ -0.61
HMGCL-201ENST00000235958 ZC2HC1CQ53FD0 456 aaPredicted RBP11.21□□□□□ -0.61
HMGCL-201ENST00000235958 ISM2Q6H9L7 571 aa11.21□□□□□ -0.61
HMGCL-201ENST00000235958 MFSD5Q6N075 450 aa11.21□□□□□ -0.61
HMGCL-201ENST00000235958 IFNLR1Q8IU57 520 aaPredicted RBP11.21□□□□□ -0.61
HMGCL-201ENST00000235958 USP38Q8NB14 1042 aa11.21□□□□□ -0.61
HMGCL-201ENST00000235958 TMEM161BQ8NDZ6 487 aa11.21□□□□□ -0.61
HMGCL-201ENST00000235958 CCDC47Q96A33 483 aaKnown RBP11.21□□□□□ -0.61
HMGCL-201ENST00000235958 FZD8Q9H461 694 aa11.21□□□□□ -0.61
HMGCL-201ENST00000235958 TMEM134Q9H6X4 195 aa11.21□□□□□ -0.61
HMGCL-201ENST00000235958 SLC39A2Q9NP94 309 aa11.21□□□□□ -0.61
HMGCL-201ENST00000235958 OLFML3Q9NRN5 406 aa11.21□□□□□ -0.61
HMGCL-201ENST00000235958 EXOC1Q9NV70 894 aa11.21□□□□□ -0.61
HMGCL-201ENST00000235958 PCDH10Q9P2E7 1040 aa11.21□□□□□ -0.61
HMGCL-201ENST00000235958 ARHGAP28Q9P2N2 729 aa11.21□□□□□ -0.61
HMGCL-201ENST00000235958 ZMYND8Q9ULU4 1186 aaPredicted RBP11.21□□□□□ -0.61
HMGCL-201ENST00000235958 PADI3Q9ULW8 664 aa11.21□□□□□ -0.61
HMGCL-201ENST00000235958 ST3GAL5Q9UNP4 418 aa11.21□□□□□ -0.61
HMGCL-201ENST00000235958 SCN5AQ14524 2016 aa11.21□□□□□ -0.62
HMGCL-201ENST00000235958 ADGRA3Q8IWK6 1321 aa11.2□□□□□ -0.62
HMGCL-201ENST00000235958 DENND3A2RUS2 1198 aa11.2□□□□□ -0.62
HMGCL-201ENST00000235958 H0YCG3 227 aa11.2□□□□□ -0.62
HMGCL-201ENST00000235958 RPS6KA5O75582 802 aa11.2□□□□□ -0.62
HMGCL-201ENST00000235958 RHOBTB3O94955 611 aa11.2□□□□□ -0.62
HMGCL-201ENST00000235958 CSF2RAP15509 400 aa11.2□□□□□ -0.62
HMGCL-201ENST00000235958 CASP5P51878 434 aa11.2□□□□□ -0.62
HMGCL-201ENST00000235958 NCKAP1LP55160 1127 aa11.2□□□□□ -0.62
HMGCL-201ENST00000235958 GTF2BQ00403 316 aa11.2□□□□□ -0.62
HMGCL-201ENST00000235958 NFX1Q12986 1120 aaKnown RBP11.2□□□□□ -0.62
HMGCL-201ENST00000235958 MAPK6Q16659 721 aa11.2□□□□□ -0.62
HMGCL-201ENST00000235958 FAM26FQ5R3K3 315 aa11.2□□□□□ -0.62
HMGCL-201ENST00000235958 NT5DC1Q5TFE4 455 aa11.2□□□□□ -0.62
HMGCL-201ENST00000235958 CDCA2Q69YH5 1023 aaPredicted RBP11.2□□□□□ -0.62
HMGCL-201ENST00000235958 TAS1R3Q7RTX0 852 aa11.2□□□□□ -0.62
HMGCL-201ENST00000235958 DEFB128Q7Z7B8 93 aa11.2□□□□□ -0.62
HMGCL-201ENST00000235958 ZBTB8OSQ8IWT0 167 aa11.2□□□□□ -0.62
HMGCL-201ENST00000235958 TMEM199Q8N511 208 aa11.2□□□□□ -0.62
HMGCL-201ENST00000235958 SLC17A8Q8NDX2 589 aa11.2□□□□□ -0.62
HMGCL-201ENST00000235958 BADQ92934 168 aa11.2□□□□□ -0.62
HMGCL-201ENST00000235958 VWCEQ96DN2 955 aa11.2□□□□□ -0.62
HMGCL-201ENST00000235958 STRA6Q9BX79 667 aa11.2□□□□□ -0.62
HMGCL-201ENST00000235958 FGFBP2Q9BYJ0 223 aa11.2□□□□□ -0.62
HMGCL-201ENST00000235958 C2orf40Q9H1Z8 148 aa11.2□□□□□ -0.62
HMGCL-201ENST00000235958 ST6GALNAC4Q9H4F1 302 aa11.2□□□□□ -0.62
HMGCL-201ENST00000235958 TMEM63CQ9P1W3 806 aa11.2□□□□□ -0.62
HMGCL-201ENST00000235958 USP20Q9Y2K6 914 aa11.2□□□□□ -0.62
HMGCL-201ENST00000235958 PCDHB13Q9Y5F0 798 aa11.2□□□□□ -0.62
HMGCL-201ENST00000235958 PDE4DIPQ5VU43 2346 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 TTLL13PA6NNM8 815 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 BIN1O00499 593 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 ACKR2O00590 384 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 GPR182O15218 404 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 GCNT3O95395 438 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 CXCL10P02778 98 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 MYBP10242 640 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 SCP2P22307 547 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 CD52P31358 61 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 MBTD1Q05BQ5 628 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 KCNA1Q09470 495 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 FAM187BQ17R55 369 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 PLEKHG4Q58EX7 1191 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 CCDC183Q5T5S1 534 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 CAVIN1Q6NZI2 390 aaKnown RBP11.19□□□□□ -0.62
HMGCL-201ENST00000235958 TSHZ1Q6ZSZ6 1077 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 CATSPER4Q7RTX7 472 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 FAM228AQ86W67 206 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 RPUSD2Q8IZ73 545 aaKnown RBP11.19□□□□□ -0.62
HMGCL-201ENST00000235958 GLIS3Q8NEA6 775 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 DBF4BQ8NFT6 615 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 ZNF507Q8TCN5 953 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 KCNN1Q92952 543 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 CCDC113Q9H0I3 377 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 ERVK-5Q9HDB9 667 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 RMND1Q9NWS8 449 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 MAN1B1Q9UKM7 699 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 TBX20Q9UMR3 447 aa11.19□□□□□ -0.62
HMGCL-201ENST00000235958 K7ENM7 598 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms