RNA–Protein interactions for RNA: ENST00000235349.5

PRAMEF4-201, Transcript of PRAME family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF4, Length 1,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4-201ENST00000235349 NTPCRQ9BSD7 190 aaKnown RBP11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 TRMT1Q9NXH9 659 aaKnown RBP11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 TAB2Q9NYJ8 693 aa11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 LIMA1Q9UHB6 759 aaKnown RBP11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 DNAI1Q9UI46 699 aa11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 PCDHB13Q9Y5F0 798 aa11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 IGKV6-21A0A0C4DH24 114 aa11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 PDXKO00764 312 aa11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 ADCY3O60266 1144 aa11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 FKTNO75072 461 aa11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 ZRANB2O95218 330 aaKnown RBP eCLIP11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 GJB1P08034 283 aa11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 PNMA6AP0CW24 399 aaPredicted RBP11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 MAPTP10636 758 aaKnown RBP11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 RFC5P40937 340 aa11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 SLC26A2P50443 739 aa11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 GTF2BQ00403 316 aa11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 TBC1D8BQ0IIM8 1120 aa11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 TAS1R3Q7RTX0 852 aa11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 PRPF31Q8WWY3 499 aaKnown RBP11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 SLC7A3Q8WY07 619 aa11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 ZNF668Q96K58 619 aaPredicted RBP11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 CNOT6LQ96LI5 555 aaKnown RBP11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 AP5M1Q9H0R1 490 aa11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 KMT5AQ9NQR1 393 aa11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 ZNF446Q9NWS9 450 aa11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 TRAF3IP3Q9Y228 551 aa11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 USP20Q9Y2K6 914 aa11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 FHOD1Q9Y613 1164 aa11.12□□□□□ -0.63
PRAMEF4-201ENST00000235349 THSD7BQ9C0I4 1608 aa11.11□□□□□ -0.63
PRAMEF4-201ENST00000235349 A0A1B0GTH6 734 aa11.11□□□□□ -0.63
PRAMEF4-201ENST00000235349 RBAK-RBAKDNI3L0D1 243 aa11.11□□□□□ -0.63
PRAMEF4-201ENST00000235349 PGK1P00558 417 aa11.11□□□□□ -0.63
PRAMEF4-201ENST00000235349 MYL3P08590 195 aa11.11□□□□□ -0.63
PRAMEF4-201ENST00000235349 AKR1A1P14550 325 aa11.11□□□□□ -0.63
PRAMEF4-201ENST00000235349 KLRC1P26715 233 aa11.11□□□□□ -0.63
PRAMEF4-201ENST00000235349 HOXD10P28358 340 aa11.11□□□□□ -0.63
PRAMEF4-201ENST00000235349 COPB1P53618 953 aaKnown RBP11.11□□□□□ -0.63
PRAMEF4-201ENST00000235349 DMP1Q13316 513 aaPredicted RBP11.11□□□□□ -0.63
PRAMEF4-201ENST00000235349 ADAM9Q13443 819 aa11.11□□□□□ -0.63
PRAMEF4-201ENST00000235349 ARID5BQ14865 1188 aa11.11□□□□□ -0.63
PRAMEF4-201ENST00000235349 ZNF484Q5JVG2 852 aa11.11□□□□□ -0.63
PRAMEF4-201ENST00000235349 ZSWIM2Q8NEG5 633 aa11.11□□□□□ -0.63
PRAMEF4-201ENST00000235349 MNS1Q8NEH6 495 aa11.11□□□□□ -0.63
PRAMEF4-201ENST00000235349 NOC3LQ8WTT2 800 aaKnown RBP11.11□□□□□ -0.63
PRAMEF4-201ENST00000235349 SPIRE2Q8WWL2 714 aa11.11□□□□□ -0.63
PRAMEF4-201ENST00000235349 TYW1Q9NV66 732 aaKnown RBP11.11□□□□□ -0.63
PRAMEF4-201ENST00000235349 DENND3A2RUS2 1198 aa11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 ANKRD63C9JTQ0 380 aa11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 DUSP11O75319 330 aaKnown RBP11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 C22orf31O95567 290 aa11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 PRKAR2AP13861 404 aaKnown RBP11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 CASP4P49662 377 aa11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 CLCN6P51797 869 aa11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 SMTNP53814 917 aa11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 RTP1P59025 263 aa11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 FKBP3Q00688 224 aaKnown RBP11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 HIC1Q14526 733 aa11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 FSCN1Q16658 493 aaKnown RBP11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 ARHGAP29Q52LW3 1261 aa11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 MARCH8Q5T0T0 291 aa11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 EFCAB12Q6NXP0 572 aa11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 FOXR2Q6PJQ5 311 aa11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 TMC6Q7Z403 805 aa11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 ZC3H3Q8IXZ2 948 aaKnown RBP11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 SYCP3Q8IZU3 236 aa11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 METTL13Q8N6R0 699 aa11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 IFT74Q96LB3 600 aa11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 ACCSQ96QU6 501 aa11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 ST6GALNAC4Q9H4F1 302 aa11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 C17orf75Q9HAS0 396 aa11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 SETD4Q9NVD3 440 aa11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 TBX20Q9UMR3 447 aa11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 Q9Y3F1 56 aa11.1□□□□□ -0.63
PRAMEF4-201ENST00000235349 N4BP3O15049 544 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 SEPT4O43236 478 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 NR3C1P04150 777 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 SRGAP2CP0DJJ0 459 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 NR2F2P24468 414 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 EEF1GP26641 437 aaKnown RBP11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 NOP2P46087 812 aaKnown RBP11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 CLCN3P51790 818 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 LAMTOR4Q0VGL1 99 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 CAPSQ13938 189 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 KIAA0753Q2KHM9 967 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 ERCC6LQ2NKX8 1250 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 EDRF1Q3B7T1 1238 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 IER5Q5VY09 327 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 ARMCX5Q6P1M9 558 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 SYT10Q6XYQ8 523 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 GPR161Q8N6U8 529 aaKnown RBP11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 RAET1EQ8TD07 263 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 TUBGCP2Q9BSJ2 902 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 UBXN6Q9BZV1 441 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 RASSF4Q9H2L5 321 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 SUCLA2Q9P2R7 463 aaPredicted RBP11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 MAGEC2Q9UBF1 373 aaPredicted RBP11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 LRRIQ4A6NIV6 560 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 CETN3O15182 167 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 CALUO43852 315 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms