RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.97□□□□□ -0.17
MSH2-201ENST00000233146 DEXIO95424 95 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 GH1P01241 217 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 TAC1P20366 129 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 CCNE1P24864 410 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 GRM2Q14416 872 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 ANKRD40Q6AI12 368 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 LRRC8BQ6P9F7 803 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 BARGINQ6ZT62 677 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 ERP44Q9BS26 406 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 ROPN1BQ9BZX4 212 aaPredicted RBP13.97□□□□□ -0.17
MSH2-201ENST00000233146 ROPN1Q9HAT0 212 aaPredicted RBP13.97□□□□□ -0.17
MSH2-201ENST00000233146 SPO11Q9Y5K1 396 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 ARHGAP23Q9P227 1491 aa13.96□□□□□ -0.17
MSH2-201ENST00000233146 MYPNQ86TC9 1320 aa13.96□□□□□ -0.17
MSH2-201ENST00000233146 RHOBTB3O94955 611 aa13.96□□□□□ -0.17
MSH2-201ENST00000233146 CPA3P15088 417 aa13.96□□□□□ -0.17
MSH2-201ENST00000233146 HOXA10P31260 410 aaPredicted RBP13.96□□□□□ -0.17
MSH2-201ENST00000233146 DSG1Q02413 1049 aa13.96□□□□□ -0.17
MSH2-201ENST00000233146 VWA3BQ502W6 1294 aa13.96□□□□□ -0.17
MSH2-201ENST00000233146 TDRD12Q587J7 1177 aaKnown RBP13.96□□□□□ -0.17
MSH2-201ENST00000233146 Q6ZNX1 250 aa13.96□□□□□ -0.17
MSH2-201ENST00000233146 CCDC84Q86UT8 332 aaPredicted RBP13.96□□□□□ -0.17
MSH2-201ENST00000233146 TBC1D10CQ8IV04 446 aa13.96□□□□□ -0.17
MSH2-201ENST00000233146 ARHGEF2Q92974 986 aaKnown RBP13.96□□□□□ -0.17
MSH2-201ENST00000233146 P2RX5Q93086 422 aa13.96□□□□□ -0.17
MSH2-201ENST00000233146 ECSITQ9BQ95 431 aa13.96□□□□□ -0.17
MSH2-201ENST00000233146 EIF2AQ9BY44 585 aaKnown RBP13.96□□□□□ -0.17
MSH2-201ENST00000233146 EDEM3Q9BZQ6 932 aa13.96□□□□□ -0.17
MSH2-201ENST00000233146 STARD13Q9Y3M8 1113 aa13.96□□□□□ -0.17
MSH2-201ENST00000233146 NID2Q14112 1375 aa13.96□□□□□ -0.17
MSH2-201ENST00000233146 PITPNM2Q9BZ72 1349 aa13.96□□□□□ -0.17
MSH2-201ENST00000233146 HNRNPCL1O60812 293 aaKnown RBP13.96□□□□□ -0.18
MSH2-201ENST00000233146 GSTT2P0CG29 244 aa13.96□□□□□ -0.18
MSH2-201ENST00000233146 GSTT2BP0CG30 244 aa13.96□□□□□ -0.18
MSH2-201ENST00000233146 ATP2C1P98194 919 aaPredicted RBP13.96□□□□□ -0.18
MSH2-201ENST00000233146 CDR2Q01850 454 aa13.96□□□□□ -0.18
MSH2-201ENST00000233146 SLC9C1Q4G0N8 1177 aa13.96□□□□□ -0.18
MSH2-201ENST00000233146 ANKRD42Q8N9B4 389 aa13.96□□□□□ -0.18
MSH2-201ENST00000233146 LRRC57Q8N9N7 239 aa13.96□□□□□ -0.18
MSH2-201ENST00000233146 FADS3Q9Y5Q0 445 aa13.96□□□□□ -0.18
MSH2-201ENST00000233146 FLT4P35916 1363 aa13.96□□□□□ -0.18
MSH2-201ENST00000233146 E9PBE3 544 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 NFKBIAP25963 317 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 CRABP2P29373 138 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 MOGSQ13724 837 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 IZUMO2Q6UXV1 221 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 ACAD11Q709F0 780 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 NUP93Q8N1F7 819 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 BBS5Q8N3I7 341 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 UHMK1Q8TAS1 419 aaKnown RBP13.95□□□□□ -0.18
MSH2-201ENST00000233146 HSPBAP1Q96EW2 488 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 PACSIN1Q9BY11 444 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 NT5C3AQ9H0P0 336 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 BICDL2A1A5D9 508 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 RIPK2O43353 540 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 PDE5AO76074 875 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 SERPING1P05155 500 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 VPS41P49754 854 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 CLCN2P51788 898 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 NEK2P51955 445 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 DRG2P55039 364 aaKnown RBP13.95□□□□□ -0.18
MSH2-201ENST00000233146 PLTPP55058 493 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 NEXNQ0ZGT2 675 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 SPIDRQ14159 915 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 ZNF174Q15697 407 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 SLC18A3Q16572 532 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 RIC3Q7Z5B4 369 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 FBXO25Q8TCJ0 367 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 USP29Q9HBJ7 922 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 STXBP5LQ9Y2K9 1186 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 WASF2Q9Y6W5 498 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 TLR2O60603 784 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 ZFYP08048 801 aaPredicted RBP13.95□□□□□ -0.18
MSH2-201ENST00000233146 STX2P32856 288 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 LIFRP42702 1097 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 ACADVLP49748 655 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 PTGDRQ13258 359 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 OTUD6AQ7L8S5 288 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 ALDH16A1Q8IZ83 802 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 LBHD1Q9BQE6 289 aaPredicted RBP13.95□□□□□ -0.18
MSH2-201ENST00000233146 TAOK3Q9H2K8 898 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 SAR1AQ9NR31 198 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 SLC12A7Q9Y666 1083 aa13.95□□□□□ -0.18
MSH2-201ENST00000233146 POTEFA5A3E0 1075 aa13.94□□□□□ -0.18
MSH2-201ENST00000233146 OPHN1O60890 802 aa13.94□□□□□ -0.18
MSH2-201ENST00000233146 IFIT1P09914 478 aaKnown RBP13.94□□□□□ -0.18
MSH2-201ENST00000233146 POTEIP0CG38 1075 aa13.94□□□□□ -0.18
MSH2-201ENST00000233146 COL6A2P12110 1019 aa13.94□□□□□ -0.18
MSH2-201ENST00000233146 HOXD11P31277 338 aaPredicted RBP13.94□□□□□ -0.18
MSH2-201ENST00000233146 FOXN2P32314 431 aa13.94□□□□□ -0.18
MSH2-201ENST00000233146 TRPC1P48995 793 aa13.94□□□□□ -0.18
MSH2-201ENST00000233146 POTEEQ6S8J3 1075 aa13.94□□□□□ -0.18
MSH2-201ENST00000233146 ARHGAP27Q6ZUM4 889 aa13.94□□□□□ -0.18
MSH2-201ENST00000233146 CRACR2BQ8N4Y2 399 aaPredicted RBP13.94□□□□□ -0.18
MSH2-201ENST00000233146 SYN2Q92777 582 aaPredicted RBP13.94□□□□□ -0.18
MSH2-201ENST00000233146 GOLPH3Q9H4A6 298 aa13.94□□□□□ -0.18
MSH2-201ENST00000233146 DDX18Q9NVP1 670 aaKnown RBP13.94□□□□□ -0.18
MSH2-201ENST00000233146 FAM32AQ9Y421 112 aaKnown RBP13.94□□□□□ -0.18
MSH2-201ENST00000233146 WNK3Q9BYP7 1800 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms