RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 GNA14O95837 355 aa15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 TNIP1Q15025 636 aa15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 TRIP13Q15645 432 aaPredicted RBP15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 VSIG1Q86XK7 387 aa15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 CCDC105Q8IYK2 499 aa15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 ARHGEF26Q96DR7 871 aa15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 CEP63Q96MT8 703 aa15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 LZTS2Q9BRK4 669 aa15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 ERP44Q9BS26 406 aa15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 SRP68Q9UHB9 627 aaKnown RBP15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 SLC12A4Q9UP95 1085 aa15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 CCDC169A6NNP5 214 aa15.23■□□□□ 0.03
PCDHB3-201ENST00000231130 TAL1P17542 331 aaPredicted RBP15.23■□□□□ 0.03
PCDHB3-201ENST00000231130 CYP11B2P19099 503 aa15.23■□□□□ 0.03
PCDHB3-201ENST00000231130 MARCKSL1P49006 195 aa15.23■□□□□ 0.03
PCDHB3-201ENST00000231130 PALB2Q86YC2 1186 aa15.23■□□□□ 0.03
PCDHB3-201ENST00000231130 JAMLQ86YT9 394 aa15.23■□□□□ 0.03
PCDHB3-201ENST00000231130 CNKSR1Q969H4 720 aa15.23■□□□□ 0.03
PCDHB3-201ENST00000231130 RHBDL2Q9NX52 303 aa15.23■□□□□ 0.03
PCDHB3-201ENST00000231130 CTTNBP2NLQ9P2B4 639 aa15.23■□□□□ 0.03
PCDHB3-201ENST00000231130 ABCB11O95342 1321 aa15.23■□□□□ 0.03
PCDHB3-201ENST00000231130 BCORQ6W2J9 1755 aa15.23■□□□□ 0.03
PCDHB3-201ENST00000231130 MED24O75448 989 aa15.23■□□□□ 0.03
PCDHB3-201ENST00000231130 COPS2P61201 443 aa15.23■□□□□ 0.03
PCDHB3-201ENST00000231130 MRPS35P82673 323 aaKnown RBP15.23■□□□□ 0.03
PCDHB3-201ENST00000231130 PRR16Q569H4 304 aa15.23■□□□□ 0.03
PCDHB3-201ENST00000231130 GBP5Q96PP8 586 aa15.23■□□□□ 0.03
PCDHB3-201ENST00000231130 POP1Q99575 1024 aaKnown RBP15.23■□□□□ 0.03
PCDHB3-201ENST00000231130 ADAM33Q9BZ11 813 aa15.23■□□□□ 0.03
PCDHB3-201ENST00000231130 SLITRK6Q9H5Y7 841 aa15.23■□□□□ 0.03
PCDHB3-201ENST00000231130 ALS2Q96Q42 1657 aa15.23■□□□□ 0.03
PCDHB3-201ENST00000231130 KCNQ2O43526 872 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 SUN1O94901 812 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 TRIM49P0CI25 452 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 TRIM49CP0CI26 452 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 CYP2J2P51589 502 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 MESDQ14696 234 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 SEPT2Q15019 361 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 TBC1D9BQ66K14 1250 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 SYCE1Q8N0S2 351 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 NUDCD1Q96RS6 583 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 THAP2Q9H0W7 228 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 KCTD10Q9H3F6 313 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 BCL9O00512 1426 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 RASGRF2O14827 1237 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 ATMINO43313 823 aaPredicted RBP15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 RARAP10276 462 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 KIAA1755Q5JYT7 1200 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 DCAF12L1Q5VU92 463 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 TEX9Q8N6V9 391 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 ATP8B4Q8TF62 1192 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 MRRFQ96E11 262 aaKnown RBP15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 PSTPIP2Q9H939 334 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 NKX1-2Q9UD57 310 aaPredicted RBP15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 PFDN1O60925 122 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 TNFAIP3P21580 790 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 PDIA5Q14554 519 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 COBLL1Q53SF7 1204 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 DPP8Q6V1X1 898 aaPredicted RBP15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 MAIP1Q8WWC4 291 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 ALG3Q92685 438 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 ZNF317Q96PQ6 595 aaPredicted RBP15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 TRIM7Q9C029 511 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 PABPC3Q9H361 631 aaKnown RBP15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 CTNNAL1Q9UBT7 734 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 SCOCQ9UIL1 159 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 CASZ1Q86V15 1759 aa15.22■□□□□ 0.03
PCDHB3-201ENST00000231130 USP17L10C9JJH3 530 aa15.21■□□□□ 0.03
PCDHB3-201ENST00000231130 SERPINB4P48594 390 aa15.21■□□□□ 0.03
PCDHB3-201ENST00000231130 TMEM119Q4V9L6 283 aa15.21■□□□□ 0.03
PCDHB3-201ENST00000231130 HOMEZQ8IX15 550 aa15.21■□□□□ 0.03
PCDHB3-201ENST00000231130 LNX1Q8TBB1 728 aaPredicted RBP15.21■□□□□ 0.03
PCDHB3-201ENST00000231130 PIGOQ8TEQ8 1089 aa15.21■□□□□ 0.03
PCDHB3-201ENST00000231130 KRT35Q92764 455 aa15.21■□□□□ 0.03
PCDHB3-201ENST00000231130 UBE2OQ9C0C9 1292 aaKnown RBP15.21■□□□□ 0.03
PCDHB3-201ENST00000231130 ZNF287Q9HBT7 754 aa15.21■□□□□ 0.03
PCDHB3-201ENST00000231130 CHMP2AO43633 222 aa15.21■□□□□ 0.03
PCDHB3-201ENST00000231130 DRAP1Q14919 205 aaPredicted RBP15.21■□□□□ 0.03
PCDHB3-201ENST00000231130 TBC1D10BQ4KMP7 808 aaPredicted RBP15.21■□□□□ 0.03
PCDHB3-201ENST00000231130 ZC2HC1CQ53FD0 456 aaPredicted RBP15.21■□□□□ 0.03
PCDHB3-201ENST00000231130 BARGINQ6ZT62 677 aa15.21■□□□□ 0.03
PCDHB3-201ENST00000231130 CPNE8Q86YQ8 564 aa15.21■□□□□ 0.03
PCDHB3-201ENST00000231130 C1orf131Q8NDD1 294 aaKnown RBP15.21■□□□□ 0.03
PCDHB3-201ENST00000231130 BTBD6Q96KE9 485 aa15.21■□□□□ 0.03
PCDHB3-201ENST00000231130 REEP2Q9BRK0 252 aa15.21■□□□□ 0.03
PCDHB3-201ENST00000231130 BHMT2Q9H2M3 363 aa15.21■□□□□ 0.03
PCDHB3-201ENST00000231130 SLAIN2Q9P270 581 aa15.21■□□□□ 0.03
PCDHB3-201ENST00000231130 SUCLA2Q9P2R7 463 aaPredicted RBP15.21■□□□□ 0.03
PCDHB3-201ENST00000231130 EIF3BP55884 814 aaKnown RBP15.21■□□□□ 0.02
PCDHB3-201ENST00000231130 IKQ13123 557 aaPredicted RBP15.21■□□□□ 0.02
PCDHB3-201ENST00000231130 ARSHQ5FYA8 562 aa15.21■□□□□ 0.02
PCDHB3-201ENST00000231130 ADGRF4Q8IZF3 695 aa15.21■□□□□ 0.02
PCDHB3-201ENST00000231130 DNAJC12Q9UKB3 198 aa15.21■□□□□ 0.02
PCDHB3-201ENST00000231130 BZW2Q9Y6E2 419 aaKnown RBP15.21■□□□□ 0.02
PCDHB3-201ENST00000231130 CACNA1SQ13698 1873 aa15.21■□□□□ 0.02
PCDHB3-201ENST00000231130 UBR2Q8IWV8 1755 aa15.2■□□□□ 0.02
PCDHB3-201ENST00000231130 NR3C1P04150 777 aa15.2■□□□□ 0.02
PCDHB3-201ENST00000231130 RPL21P46778 160 aaKnown RBP15.2■□□□□ 0.02
PCDHB3-201ENST00000231130 ITIH4Q14624 930 aa15.2■□□□□ 0.02
PCDHB3-201ENST00000231130 KNOP1Q1ED39 458 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms