RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 DDX12PQ92771 950 aa22.33■■□□□ 1.17
SNX3-201ENST00000230085 CDK5RAP3Q96JB5 506 aa22.33■■□□□ 1.17
SNX3-201ENST00000230085 SLITRK6Q9H5Y7 841 aa22.33■■□□□ 1.17
SNX3-201ENST00000230085 PLAAQ9Y263 795 aa22.33■■□□□ 1.17
SNX3-201ENST00000230085 RIPK3Q9Y572 518 aa22.33■■□□□ 1.17
SNX3-201ENST00000230085 GCOM1H8Y6P7 765 aaPredicted RBP22.33■■□□□ 1.16
SNX3-201ENST00000230085 TRAPPC3O43617 180 aa22.33■■□□□ 1.16
SNX3-201ENST00000230085 MYZAPP0CAP1 466 aa22.33■■□□□ 1.16
SNX3-201ENST00000230085 STAT3P40763 770 aa22.33■■□□□ 1.16
SNX3-201ENST00000230085 PRKCIP41743 596 aa22.33■■□□□ 1.16
SNX3-201ENST00000230085 ATP1A2P50993 1020 aa22.33■■□□□ 1.16
SNX3-201ENST00000230085 SP3Q02447 781 aa22.33■■□□□ 1.16
SNX3-201ENST00000230085 QRICH1Q2TAL8 776 aa22.33■■□□□ 1.16
SNX3-201ENST00000230085 KRT79Q5XKE5 535 aa22.33■■□□□ 1.16
SNX3-201ENST00000230085 KCTD16Q68DU8 428 aa22.33■■□□□ 1.16
SNX3-201ENST00000230085 SLFN11Q7Z7L1 901 aa22.33■■□□□ 1.16
SNX3-201ENST00000230085 CCDC50Q8IVM0 306 aa22.33■■□□□ 1.16
SNX3-201ENST00000230085 PSMB7Q99436 277 aa22.33■■□□□ 1.16
SNX3-201ENST00000230085 MOV10L1Q9BXT6 1211 aaKnown RBP22.33■■□□□ 1.16
SNX3-201ENST00000230085 PORCNQ9H237 461 aa22.33■■□□□ 1.16
SNX3-201ENST00000230085 SEC63Q9UGP8 760 aaKnown RBP22.33■■□□□ 1.16
SNX3-201ENST00000230085 TTC7AQ9ULT0 858 aaPredicted RBP22.33■■□□□ 1.16
SNX3-201ENST00000230085 KDM3AQ9Y4C1 1321 aa22.32■■□□□ 1.16
SNX3-201ENST00000230085 ATP2A1O14983 1001 aa22.32■■□□□ 1.16
SNX3-201ENST00000230085 ZBTB5O15062 677 aa22.32■■□□□ 1.16
SNX3-201ENST00000230085 KIF4AO95239 1232 aa22.32■■□□□ 1.16
SNX3-201ENST00000230085 NPEPPSP55786 919 aa22.32■■□□□ 1.16
SNX3-201ENST00000230085 COASYQ13057 564 aa22.32■■□□□ 1.16
SNX3-201ENST00000230085 RPS6KA1Q15418 735 aa22.32■■□□□ 1.16
SNX3-201ENST00000230085 LACTB2Q53H82 288 aaPredicted RBP22.32■■□□□ 1.16
SNX3-201ENST00000230085 SNRNP48Q6IEG0 339 aaKnown RBP22.32■■□□□ 1.16
SNX3-201ENST00000230085 ZNF296Q8WUU4 475 aaPredicted RBP22.32■■□□□ 1.16
SNX3-201ENST00000230085 TAF4BQ92750 862 aa22.32■■□□□ 1.16
SNX3-201ENST00000230085 TEX13BQ9BXU2 312 aa22.32■■□□□ 1.16
SNX3-201ENST00000230085 PCDHA2Q9Y5H9 948 aa22.32■■□□□ 1.16
SNX3-201ENST00000230085 CENPFP49454 3210 aa22.31■■□□□ 1.16
SNX3-201ENST00000230085 A0A087X0T9 212 aa22.31■■□□□ 1.16
SNX3-201ENST00000230085 TMCO5BA8MYB1 307 aa22.31■■□□□ 1.16
SNX3-201ENST00000230085 EDIL3O43854 480 aa22.31■■□□□ 1.16
SNX3-201ENST00000230085 ICAM1P05362 532 aa22.31■■□□□ 1.16
SNX3-201ENST00000230085 FAM228BP0C875 321 aa22.31■■□□□ 1.16
SNX3-201ENST00000230085 HSD17B3P37058 310 aa22.31■■□□□ 1.16
SNX3-201ENST00000230085 OAZ1P54368 228 aa22.31■■□□□ 1.16
SNX3-201ENST00000230085 KIAA0753Q2KHM9 967 aa22.31■■□□□ 1.16
SNX3-201ENST00000230085 DPY19L2P1Q6NXN4 242 aa22.31■■□□□ 1.16
SNX3-201ENST00000230085 IFT81Q8WYA0 676 aa22.31■■□□□ 1.16
SNX3-201ENST00000230085 TBC1D5Q92609 795 aa22.31■■□□□ 1.16
SNX3-201ENST00000230085 CENPTQ96BT3 561 aa22.31■■□□□ 1.16
SNX3-201ENST00000230085 CYFIP2Q96F07 1278 aa22.31■■□□□ 1.16
SNX3-201ENST00000230085 FRMD3A2A2Y4 597 aa22.3■■□□□ 1.16
SNX3-201ENST00000230085 GMNCA6NCL1 334 aa22.3■■□□□ 1.16
SNX3-201ENST00000230085 ZSCAN5CA6NGD5 496 aaPredicted RBP22.3■■□□□ 1.16
SNX3-201ENST00000230085 TULP1O00294 542 aaPredicted RBP22.3■■□□□ 1.16
SNX3-201ENST00000230085 PPP1R11O60927 126 aaPredicted RBP22.3■■□□□ 1.16
SNX3-201ENST00000230085 GFPT2O94808 682 aa22.3■■□□□ 1.16
SNX3-201ENST00000230085 CAP1Q01518 475 aa22.3■■□□□ 1.16
SNX3-201ENST00000230085 FAM26FQ5R3K3 315 aa22.3■■□□□ 1.16
SNX3-201ENST00000230085 CEP85LQ5SZL2 805 aa22.3■■□□□ 1.16
SNX3-201ENST00000230085 TTC19Q6DKK2 380 aaPredicted RBP22.3■■□□□ 1.16
SNX3-201ENST00000230085 NAP1L4Q99733 375 aaKnown RBP22.3■■□□□ 1.16
SNX3-201ENST00000230085 LSM14BQ9BX40 385 aaKnown RBP22.3■■□□□ 1.16
SNX3-201ENST00000230085 NT5C3AQ9H0P0 336 aa22.3■■□□□ 1.16
SNX3-201ENST00000230085 CCPG1Q9ULG6 757 aa22.3■■□□□ 1.16
SNX3-201ENST00000230085 PNMA6FA0A0J9YX94 578 aa22.3■■□□□ 1.16
SNX3-201ENST00000230085 GCFC2P16383 781 aaKnown RBP22.3■■□□□ 1.16
SNX3-201ENST00000230085 ERCC3P19447 782 aa22.3■■□□□ 1.16
SNX3-201ENST00000230085 CTGFP29279 349 aa22.3■■□□□ 1.16
SNX3-201ENST00000230085 TXKP42681 527 aa22.3■■□□□ 1.16
SNX3-201ENST00000230085 LACTBP83111 547 aaPredicted RBP22.3■■□□□ 1.16
SNX3-201ENST00000230085 ZNF844Q08AG5 666 aa22.3■■□□□ 1.16
SNX3-201ENST00000230085 KLHL30Q0D2K2 578 aa22.3■■□□□ 1.16
SNX3-201ENST00000230085 UAP1Q16222 522 aaPredicted RBP22.3■■□□□ 1.16
SNX3-201ENST00000230085 ASIC2Q16515 512 aa22.3■■□□□ 1.16
SNX3-201ENST00000230085 USH1GQ495M9 461 aa22.3■■□□□ 1.16
SNX3-201ENST00000230085 CCDC40Q4G0X9 1142 aa22.3■■□□□ 1.16
SNX3-201ENST00000230085 RIOX2Q8IUF8 465 aa22.3■■□□□ 1.16
SNX3-201ENST00000230085 HINFPQ9BQA5 517 aa22.3■■□□□ 1.16
SNX3-201ENST00000230085 ARHGAP39Q9C0H5 1083 aa22.3■■□□□ 1.16
SNX3-201ENST00000230085 HOMER2Q9NSB8 354 aa22.3■■□□□ 1.16
SNX3-201ENST00000230085 H0YHG0 523 aa22.29■■□□□ 1.16
SNX3-201ENST00000230085 PGRMC1O00264 195 aaKnown RBP22.29■■□□□ 1.16
SNX3-201ENST00000230085 FTCDO95954 541 aa22.29■■□□□ 1.16
SNX3-201ENST00000230085 POLR2FP61218 127 aaKnown RBP22.29■■□□□ 1.16
SNX3-201ENST00000230085 CCNA1P78396 465 aa22.29■■□□□ 1.16
SNX3-201ENST00000230085 MRPS25P82663 173 aaKnown RBP22.29■■□□□ 1.16
SNX3-201ENST00000230085 WLSQ5T9L3 541 aa22.29■■□□□ 1.16
SNX3-201ENST00000230085 NCAPG2Q86XI2 1143 aa22.29■■□□□ 1.16
SNX3-201ENST00000230085 CCDC13Q8IYE1 715 aa22.29■■□□□ 1.16
SNX3-201ENST00000230085 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.29■■□□□ 1.16
SNX3-201ENST00000230085 KCTD10Q9H3F6 313 aa22.29■■□□□ 1.16
SNX3-201ENST00000230085 SUCLA2Q9P2R7 463 aaPredicted RBP22.29■■□□□ 1.16
SNX3-201ENST00000230085 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.29■■□□□ 1.16
SNX3-201ENST00000230085 DOCK3Q8IZD9 2030 aa22.29■■□□□ 1.16
SNX3-201ENST00000230085 GOLGA6L7A0A1B0GV03 622 aa22.28■■□□□ 1.16
SNX3-201ENST00000230085 ESYT3A0FGR9 886 aa22.28■■□□□ 1.16
SNX3-201ENST00000230085 FKTNO75072 461 aa22.28■■□□□ 1.16
SNX3-201ENST00000230085 GHRP10912 638 aa22.28■■□□□ 1.16
SNX3-201ENST00000230085 HSPA8P11142 646 aaKnown RBP22.28■■□□□ 1.16
SNX3-201ENST00000230085 ALAS1P13196 640 aa22.28■■□□□ 1.16
SNX3-201ENST00000230085 GUCY2FP51841 1108 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms