RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 C1orf186Q6ZWK4 172 aa14.05□□□□□ -0.16
LSM5-201ENST00000223084 ECHDC2Q86YB7 292 aa14.05□□□□□ -0.16
LSM5-201ENST00000223084 IFNLR1Q8IU57 520 aaPredicted RBP14.05□□□□□ -0.16
LSM5-201ENST00000223084 RNF169Q8NCN4 708 aa14.05□□□□□ -0.16
LSM5-201ENST00000223084 RASSF8Q8NHQ8 419 aa14.05□□□□□ -0.16
LSM5-201ENST00000223084 SYMPKQ92797 1274 aaKnown RBP14.05□□□□□ -0.16
LSM5-201ENST00000223084 CALML4Q96GE6 196 aa14.05□□□□□ -0.16
LSM5-201ENST00000223084 CHAMP1Q96JM3 812 aa14.05□□□□□ -0.16
LSM5-201ENST00000223084 TGS1Q96RS0 853 aaKnown RBP14.05□□□□□ -0.16
LSM5-201ENST00000223084 AGPAT5Q9NUQ2 364 aa14.05□□□□□ -0.16
LSM5-201ENST00000223084 ADGRA3Q8IWK6 1321 aa14.05□□□□□ -0.16
LSM5-201ENST00000223084 NPHP3-ACAD11A0A0J9YXS1 232 aa14.04□□□□□ -0.16
LSM5-201ENST00000223084 SPTLC2O15270 562 aa14.04□□□□□ -0.16
LSM5-201ENST00000223084 HIP1RO75146 1068 aa14.04□□□□□ -0.16
LSM5-201ENST00000223084 FOSL2P15408 326 aa14.04□□□□□ -0.16
LSM5-201ENST00000223084 ATF7P17544 494 aaPredicted RBP14.04□□□□□ -0.16
LSM5-201ENST00000223084 HOXA11P31270 313 aaPredicted RBP14.04□□□□□ -0.16
LSM5-201ENST00000223084 SLC12A3P55017 1021 aa14.04□□□□□ -0.16
LSM5-201ENST00000223084 ERVK-21P61565 698 aa14.04□□□□□ -0.16
LSM5-201ENST00000223084 MBTD1Q05BQ5 628 aa14.04□□□□□ -0.16
LSM5-201ENST00000223084 POU5F1BQ06416 359 aa14.04□□□□□ -0.16
LSM5-201ENST00000223084 BTG3Q14201 252 aaPredicted RBP14.04□□□□□ -0.16
LSM5-201ENST00000223084 DHX8Q14562 1220 aaKnown RBP14.04□□□□□ -0.16
LSM5-201ENST00000223084 LONRF3Q496Y0 759 aa14.04□□□□□ -0.16
LSM5-201ENST00000223084 TWF2Q6IBS0 349 aaKnown RBP14.04□□□□□ -0.16
LSM5-201ENST00000223084 FAM43BQ6ZT52 329 aaPredicted RBP14.04□□□□□ -0.16
LSM5-201ENST00000223084 DAW1Q8N136 415 aa14.04□□□□□ -0.16
LSM5-201ENST00000223084 FIBCD1Q8N539 461 aa14.04□□□□□ -0.16
LSM5-201ENST00000223084 SYT2Q8N9I0 419 aaPredicted RBP14.04□□□□□ -0.16
LSM5-201ENST00000223084 KRI1Q8N9T8 703 aaKnown RBP14.04□□□□□ -0.16
LSM5-201ENST00000223084 GDPD5Q8WTR4 605 aa14.04□□□□□ -0.16
LSM5-201ENST00000223084 CPB2Q96IY4 423 aa14.04□□□□□ -0.16
LSM5-201ENST00000223084 KIFC3Q9BVG8 833 aa14.04□□□□□ -0.16
LSM5-201ENST00000223084 CCSER1Q9C0I3 900 aa14.04□□□□□ -0.16
LSM5-201ENST00000223084 CHST12Q9NRB3 414 aa14.04□□□□□ -0.16
LSM5-201ENST00000223084 BLOC1S4Q9NUP1 217 aa14.04□□□□□ -0.16
LSM5-201ENST00000223084 RNF19AQ9NV58 838 aa14.04□□□□□ -0.16
LSM5-201ENST00000223084 TMEM161AQ9NX61 479 aa14.04□□□□□ -0.16
LSM5-201ENST00000223084 DACT1Q9NYF0 836 aa14.04□□□□□ -0.16
LSM5-201ENST00000223084 STXBP5LQ9Y2K9 1186 aa14.04□□□□□ -0.16
LSM5-201ENST00000223084 FNDC1Q4ZHG4 1894 aaPredicted RBP14.04□□□□□ -0.16
LSM5-201ENST00000223084 A0A0U1RQF3 1178 aa14.03□□□□□ -0.16
LSM5-201ENST00000223084 TBKBP1A7MCY6 615 aa14.03□□□□□ -0.16
LSM5-201ENST00000223084 SFI1A8K8P3 1242 aa14.03□□□□□ -0.16
LSM5-201ENST00000223084 B4GALT5O43286 388 aa14.03□□□□□ -0.16
LSM5-201ENST00000223084 SLC26A4O43511 780 aa14.03□□□□□ -0.16
LSM5-201ENST00000223084 TSPAN1O60635 241 aa14.03□□□□□ -0.16
LSM5-201ENST00000223084 ERLIN2O94905 339 aa14.03□□□□□ -0.16
LSM5-201ENST00000223084 BRD1O95696 1058 aa14.03□□□□□ -0.16
LSM5-201ENST00000223084 LINC00271P0C7V0 271 aa14.03□□□□□ -0.16
LSM5-201ENST00000223084 LIG1P18858 919 aa14.03□□□□□ -0.16
LSM5-201ENST00000223084 IGFBP4P22692 258 aa14.03□□□□□ -0.16
LSM5-201ENST00000223084 DNM1Q05193 864 aaKnown RBP14.03□□□□□ -0.16
LSM5-201ENST00000223084 MAPK7Q13164 816 aa14.03□□□□□ -0.16
LSM5-201ENST00000223084 MCM6Q14566 821 aa14.03□□□□□ -0.16
LSM5-201ENST00000223084 AMHR2Q16671 573 aa14.03□□□□□ -0.16
LSM5-201ENST00000223084 CDCA2Q69YH5 1023 aaPredicted RBP14.03□□□□□ -0.16
LSM5-201ENST00000223084 ZNF598Q86UK7 904 aaKnown RBP14.03□□□□□ -0.16
LSM5-201ENST00000223084 CMTR2Q8IYT2 770 aaKnown RBP14.03□□□□□ -0.16
LSM5-201ENST00000223084 DEPTORQ8TB45 409 aa14.03□□□□□ -0.16
LSM5-201ENST00000223084 KIFAP3Q92845 792 aa14.03□□□□□ -0.16
LSM5-201ENST00000223084 LPPQ93052 612 aa14.03□□□□□ -0.16
LSM5-201ENST00000223084 GAS2L1Q99501 681 aaPredicted RBP14.03□□□□□ -0.16
LSM5-201ENST00000223084 PANK2Q9BZ23 570 aa14.03□□□□□ -0.16
LSM5-201ENST00000223084 ELAC1Q9H777 363 aaKnown RBP14.03□□□□□ -0.16
LSM5-201ENST00000223084 HCSTQ9UBK5 93 aa14.03□□□□□ -0.16
LSM5-201ENST00000223084 MRPL42Q9Y6G3 142 aaKnown RBP14.03□□□□□ -0.16
LSM5-201ENST00000223084 MORC2Q9Y6X9 1032 aaPredicted RBP14.03□□□□□ -0.16
LSM5-201ENST00000223084 NLRC5Q86WI3 1866 aa14.03□□□□□ -0.16
LSM5-201ENST00000223084 MYH11P35749 1972 aa14.03□□□□□ -0.16
LSM5-201ENST00000223084 PRRC2BQ5JSZ5 2229 aaKnown RBP14.03□□□□□ -0.16
LSM5-201ENST00000223084 CDH23Q9H251 3354 aa14.03□□□□□ -0.16
LSM5-201ENST00000223084 MYO7AQ13402 2215 aa14.02□□□□□ -0.16
LSM5-201ENST00000223084 TTLL13PA6NNM8 815 aa14.02□□□□□ -0.17
LSM5-201ENST00000223084 MEIS3P2A8K0S8 358 aa14.02□□□□□ -0.17
LSM5-201ENST00000223084 YEATS4O95619 227 aa14.02□□□□□ -0.17
LSM5-201ENST00000223084 ARF4P18085 180 aaPredicted RBP14.02□□□□□ -0.17
LSM5-201ENST00000223084 NAMPTP43490 491 aa14.02□□□□□ -0.17
LSM5-201ENST00000223084 EPC2Q52LR7 807 aa14.02□□□□□ -0.17
LSM5-201ENST00000223084 ARSHQ5FYA8 562 aa14.02□□□□□ -0.17
LSM5-201ENST00000223084 UBXN11Q5T124 520 aa14.02□□□□□ -0.17
LSM5-201ENST00000223084 CDR2LQ86X02 465 aaPredicted RBP14.02□□□□□ -0.17
LSM5-201ENST00000223084 ZBTB8OSQ8IWT0 167 aa14.02□□□□□ -0.17
LSM5-201ENST00000223084 TMEM192Q8IY95 271 aa14.02□□□□□ -0.17
LSM5-201ENST00000223084 FBXO22Q8NEZ5 403 aa14.02□□□□□ -0.17
LSM5-201ENST00000223084 RAD54LQ92698 747 aa14.02□□□□□ -0.17
LSM5-201ENST00000223084 IFT74Q96LB3 600 aa14.02□□□□□ -0.17
LSM5-201ENST00000223084 EIF2AQ9BY44 585 aaKnown RBP14.02□□□□□ -0.17
LSM5-201ENST00000223084 NFKBIZQ9BYH8 718 aa14.02□□□□□ -0.17
LSM5-201ENST00000223084 FAM105AQ9NUU6 356 aa14.02□□□□□ -0.17
LSM5-201ENST00000223084 USP20Q9Y2K6 914 aa14.02□□□□□ -0.17
LSM5-201ENST00000223084 A0A087X0B3 334 aa14.01□□□□□ -0.17
LSM5-201ENST00000223084 CCDC169A6NNP5 214 aa14.01□□□□□ -0.17
LSM5-201ENST00000223084 LPXNO60711 386 aa14.01□□□□□ -0.17
LSM5-201ENST00000223084 PPP6R2O75170 966 aa14.01□□□□□ -0.17
LSM5-201ENST00000223084 GUCY2CP25092 1073 aa14.01□□□□□ -0.17
LSM5-201ENST00000223084 CTNNB1P35222 781 aa14.01□□□□□ -0.17
LSM5-201ENST00000223084 PEX3P56589 373 aa14.01□□□□□ -0.17
LSM5-201ENST00000223084 PPP2R5AQ15172 486 aa14.01□□□□□ -0.17
LSM5-201ENST00000223084 CLLU1OSQ5K130 101 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms