RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 KIAA1468Q9P260 1216 aa14.52□□□□□ -0.09
TIMP1-201ENST00000218388 PCDHA5Q9Y5H7 936 aa14.52□□□□□ -0.09
TIMP1-201ENST00000218388 NR2E3Q9Y5X4 410 aa14.52□□□□□ -0.09
TIMP1-201ENST00000218388 SIP14410 1827 aa14.51□□□□□ -0.09
TIMP1-201ENST00000218388 INO80B-WBP1J3KQ70 363 aa14.51□□□□□ -0.09
TIMP1-201ENST00000218388 SLC16A4O15374 487 aa14.51□□□□□ -0.09
TIMP1-201ENST00000218388 RHOBTB3O94955 611 aa14.51□□□□□ -0.09
TIMP1-201ENST00000218388 KIF20AO95235 890 aa14.51□□□□□ -0.09
TIMP1-201ENST00000218388 GCNT3O95395 438 aa14.51□□□□□ -0.09
TIMP1-201ENST00000218388 CHRNA1P02708 482 aa14.51□□□□□ -0.09
TIMP1-201ENST00000218388 IQCF3P0C7M6 154 aa14.51□□□□□ -0.09
TIMP1-201ENST00000218388 DARSP14868 501 aaKnown RBP14.51□□□□□ -0.09
TIMP1-201ENST00000218388 RFC2P35250 354 aa14.51□□□□□ -0.09
TIMP1-201ENST00000218388 NCKAP1LP55160 1127 aa14.51□□□□□ -0.09
TIMP1-201ENST00000218388 NCBP1Q09161 790 aaKnown RBP14.51□□□□□ -0.09
TIMP1-201ENST00000218388 STRN3Q13033 797 aa14.51□□□□□ -0.09
TIMP1-201ENST00000218388 MAPK6Q16659 721 aa14.51□□□□□ -0.09
TIMP1-201ENST00000218388 NT5DC1Q5TFE4 455 aa14.51□□□□□ -0.09
TIMP1-201ENST00000218388 CAVIN1Q6NZI2 390 aaKnown RBP14.51□□□□□ -0.09
TIMP1-201ENST00000218388 FAM43BQ6ZT52 329 aaPredicted RBP14.51□□□□□ -0.09
TIMP1-201ENST00000218388 TMEM199Q8N511 208 aa14.51□□□□□ -0.09
TIMP1-201ENST00000218388 TRIML1Q8N9V2 468 aa14.51□□□□□ -0.09
TIMP1-201ENST00000218388 SPATA20Q8TB22 786 aa14.51□□□□□ -0.09
TIMP1-201ENST00000218388 HVCN1Q96D96 273 aa14.51□□□□□ -0.09
TIMP1-201ENST00000218388 ZNF668Q96K58 619 aaPredicted RBP14.51□□□□□ -0.09
TIMP1-201ENST00000218388 ST6GALNAC4Q9H4F1 302 aa14.51□□□□□ -0.09
TIMP1-201ENST00000218388 TMEM134Q9H6X4 195 aa14.51□□□□□ -0.09
TIMP1-201ENST00000218388 IFT122Q9HBG6 1241 aa14.51□□□□□ -0.09
TIMP1-201ENST00000218388 ARHGAP28Q9P2N2 729 aa14.51□□□□□ -0.09
TIMP1-201ENST00000218388 PCDHB13Q9Y5F0 798 aa14.51□□□□□ -0.09
TIMP1-201ENST00000218388 UBE4BO95155 1302 aa14.5□□□□□ -0.09
TIMP1-201ENST00000218388 DENND3A2RUS2 1198 aa14.5□□□□□ -0.09
TIMP1-201ENST00000218388 K7ERI5 159 aa14.5□□□□□ -0.09
TIMP1-201ENST00000218388 GPR182O15218 404 aa14.5□□□□□ -0.09
TIMP1-201ENST00000218388 RPS6KA5O75582 802 aa14.5□□□□□ -0.09
TIMP1-201ENST00000218388 ERLIN2O94905 339 aa14.5□□□□□ -0.09
TIMP1-201ENST00000218388 LETM1O95202 739 aaPredicted RBP14.5□□□□□ -0.09
TIMP1-201ENST00000218388 CYP2C18P33260 490 aa14.5□□□□□ -0.09
TIMP1-201ENST00000218388 SARSP49591 514 aaKnown RBP14.5□□□□□ -0.09
TIMP1-201ENST00000218388 EHHADHQ08426 723 aa14.5□□□□□ -0.09
TIMP1-201ENST00000218388 FBXO47Q5MNV8 452 aa14.5□□□□□ -0.09
TIMP1-201ENST00000218388 TSHZ1Q6ZSZ6 1077 aa14.5□□□□□ -0.09
TIMP1-201ENST00000218388 ZNF720Q7Z2F6 126 aa14.5□□□□□ -0.09
TIMP1-201ENST00000218388 HAUS6Q7Z4H7 955 aa14.5□□□□□ -0.09
TIMP1-201ENST00000218388 TMEM161BQ8NDZ6 487 aa14.5□□□□□ -0.09
TIMP1-201ENST00000218388 ERCC4Q92889 916 aaPredicted RBP14.5□□□□□ -0.09
TIMP1-201ENST00000218388 KCNN1Q92952 543 aa14.5□□□□□ -0.09
TIMP1-201ENST00000218388 PRIMPOLQ96LW4 560 aa14.5□□□□□ -0.09
TIMP1-201ENST00000218388 KIFC3Q9BVG8 833 aa14.5□□□□□ -0.09
TIMP1-201ENST00000218388 PRMT7Q9NVM4 692 aaPredicted RBP14.5□□□□□ -0.09
TIMP1-201ENST00000218388 TBC1D7Q9P0N9 293 aa14.5□□□□□ -0.09
TIMP1-201ENST00000218388 UMODL1Q5DID0 1318 aa14.49□□□□□ -0.09
TIMP1-201ENST00000218388 ADGRA3Q8IWK6 1321 aa14.49□□□□□ -0.09
TIMP1-201ENST00000218388 TRIM43BA6NCK2 446 aa14.49□□□□□ -0.09
TIMP1-201ENST00000218388 EIF3DO15371 548 aaKnown RBP eCLIP14.49□□□□□ -0.09
TIMP1-201ENST00000218388 PRKCBP05771 671 aa14.49□□□□□ -0.09
TIMP1-201ENST00000218388 GHRP10912 638 aa14.49□□□□□ -0.09
TIMP1-201ENST00000218388 NMT1P30419 496 aaKnown RBP14.49□□□□□ -0.09
TIMP1-201ENST00000218388 PPP1R2P41236 205 aa14.49□□□□□ -0.09
TIMP1-201ENST00000218388 CCL23P55773 120 aa14.49□□□□□ -0.09
TIMP1-201ENST00000218388 MBTD1Q05BQ5 628 aa14.49□□□□□ -0.09
TIMP1-201ENST00000218388 PAK2Q13177 524 aa14.49□□□□□ -0.09
TIMP1-201ENST00000218388 ZNF658Q5TYW1 1059 aaPredicted RBP14.49□□□□□ -0.09
TIMP1-201ENST00000218388 MFSD5Q6N075 450 aa14.49□□□□□ -0.09
TIMP1-201ENST00000218388 TRAF7Q6Q0C0 670 aa14.49□□□□□ -0.09
TIMP1-201ENST00000218388 CATSPER4Q7RTX7 472 aa14.49□□□□□ -0.09
TIMP1-201ENST00000218388 APBB2Q92870 758 aa14.49□□□□□ -0.09
TIMP1-201ENST00000218388 TRIM43Q96BQ3 446 aaPredicted RBP14.49□□□□□ -0.09
TIMP1-201ENST00000218388 WNT8AQ9H1J5 351 aa14.49□□□□□ -0.09
TIMP1-201ENST00000218388 CDHR5Q9HBB8 845 aa14.49□□□□□ -0.09
TIMP1-201ENST00000218388 SLC39A2Q9NP94 309 aa14.49□□□□□ -0.09
TIMP1-201ENST00000218388 TMEM63CQ9P1W3 806 aa14.49□□□□□ -0.09
TIMP1-201ENST00000218388 MAN1B1Q9UKM7 699 aa14.49□□□□□ -0.09
TIMP1-201ENST00000218388 EXOC7Q9UPT5 735 aa14.49□□□□□ -0.09
TIMP1-201ENST00000218388 PFKMP08237 780 aa14.48□□□□□ -0.09
TIMP1-201ENST00000218388 AXLP30530 894 aa14.48□□□□□ -0.09
TIMP1-201ENST00000218388 GTF2BQ00403 316 aa14.48□□□□□ -0.09
TIMP1-201ENST00000218388 STIM1Q13586 685 aa14.48□□□□□ -0.09
TIMP1-201ENST00000218388 LPIN1Q14693 890 aa14.48□□□□□ -0.09
TIMP1-201ENST00000218388 FAM187BQ17R55 369 aa14.48□□□□□ -0.09
TIMP1-201ENST00000218388 TMEM132AQ24JP5 1023 aa14.48□□□□□ -0.09
TIMP1-201ENST00000218388 RBM43Q6ZSC3 357 aaKnown RBP14.48□□□□□ -0.09
TIMP1-201ENST00000218388 RPUSD2Q8IZ73 545 aaKnown RBP14.48□□□□□ -0.09
TIMP1-201ENST00000218388 TMEM40Q8WWA1 233 aa14.48□□□□□ -0.09
TIMP1-201ENST00000218388 SEPT8Q92599 483 aa14.48□□□□□ -0.09
TIMP1-201ENST00000218388 BICD1Q96G01 975 aa14.48□□□□□ -0.09
TIMP1-201ENST00000218388 ACCSQ96QU6 501 aa14.48□□□□□ -0.09
TIMP1-201ENST00000218388 FIZ1Q96SL8 496 aa14.48□□□□□ -0.09
TIMP1-201ENST00000218388 LBHD1Q9BQE6 289 aaPredicted RBP14.48□□□□□ -0.09
TIMP1-201ENST00000218388 MRPL4Q9BYD3 311 aaKnown RBP14.48□□□□□ -0.09
TIMP1-201ENST00000218388 CCDC113Q9H0I3 377 aa14.48□□□□□ -0.09
TIMP1-201ENST00000218388 FZD8Q9H461 694 aa14.48□□□□□ -0.09
TIMP1-201ENST00000218388 TMEM206Q9H813 350 aa14.48□□□□□ -0.09
TIMP1-201ENST00000218388 NOC2LQ9Y3T9 749 aaKnown RBP14.48□□□□□ -0.09
TIMP1-201ENST00000218388 ACKR2O00590 384 aa14.47□□□□□ -0.09
TIMP1-201ENST00000218388 PPP1R37O75864 691 aa14.47□□□□□ -0.09
TIMP1-201ENST00000218388 MYBP10242 640 aa14.47□□□□□ -0.09
TIMP1-201ENST00000218388 NFX1Q12986 1120 aaKnown RBP14.47□□□□□ -0.09
TIMP1-201ENST00000218388 STK4Q13043 487 aa14.47□□□□□ -0.09
TIMP1-201ENST00000218388 PPIGQ13427 754 aaKnown RBP eCLIP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms