RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 IFIH1Q9BYX4 1025 aaKnown RBP22.27■■□□□ 1.16
RHBDD3-201ENST00000216085 EXOC1Q9NV70 894 aa22.27■■□□□ 1.16
RHBDD3-201ENST00000216085 K7ENM7 598 aa22.26■■□□□ 1.15
RHBDD3-201ENST00000216085 ERLIN2O94905 339 aa22.26■■□□□ 1.15
RHBDD3-201ENST00000216085 CSF2RAP15509 400 aa22.26■■□□□ 1.15
RHBDD3-201ENST00000216085 LPIN1Q14693 890 aa22.26■■□□□ 1.15
RHBDD3-201ENST00000216085 STXBP4Q6ZWJ1 553 aa22.26■■□□□ 1.15
RHBDD3-201ENST00000216085 SFR1Q86XK3 245 aa22.26■■□□□ 1.15
RHBDD3-201ENST00000216085 SEPT8Q92599 483 aa22.26■■□□□ 1.15
RHBDD3-201ENST00000216085 NTPCRQ9BSD7 190 aaKnown RBP22.26■■□□□ 1.15
RHBDD3-201ENST00000216085 MRPL44Q9H9J2 332 aaKnown RBP22.26■■□□□ 1.15
RHBDD3-201ENST00000216085 CDHR5Q9HBB8 845 aa22.26■■□□□ 1.15
RHBDD3-201ENST00000216085 OLFML3Q9NRN5 406 aa22.26■■□□□ 1.15
RHBDD3-201ENST00000216085 MAPTP10636 758 aaKnown RBP22.25■■□□□ 1.15
RHBDD3-201ENST00000216085 COASYQ13057 564 aa22.25■■□□□ 1.15
RHBDD3-201ENST00000216085 MBTPS1Q14703 1052 aa22.25■■□□□ 1.15
RHBDD3-201ENST00000216085 MAPK6Q16659 721 aa22.25■■□□□ 1.15
RHBDD3-201ENST00000216085 CATSPER4Q7RTX7 472 aa22.25■■□□□ 1.15
RHBDD3-201ENST00000216085 DEFB128Q7Z7B8 93 aa22.25■■□□□ 1.15
RHBDD3-201ENST00000216085 TMEM40Q8WWA1 233 aa22.25■■□□□ 1.15
RHBDD3-201ENST00000216085 PRMT7Q9NVM4 692 aaPredicted RBP22.25■■□□□ 1.15
RHBDD3-201ENST00000216085 RMND1Q9NWS8 449 aa22.25■■□□□ 1.15
RHBDD3-201ENST00000216085 NBNO60934 754 aa22.25■■□□□ 1.15
RHBDD3-201ENST00000216085 CXCL10P02778 98 aa22.25■■□□□ 1.15
RHBDD3-201ENST00000216085 ACTN1P12814 892 aa22.25■■□□□ 1.15
RHBDD3-201ENST00000216085 STRN3Q13033 797 aa22.25■■□□□ 1.15
RHBDD3-201ENST00000216085 ALCAMQ13740 583 aa22.25■■□□□ 1.15
RHBDD3-201ENST00000216085 IL23AQ9NPF7 189 aa22.25■■□□□ 1.15
RHBDD3-201ENST00000216085 NOC2LQ9Y3T9 749 aaKnown RBP22.25■■□□□ 1.15
RHBDD3-201ENST00000216085 CEP290O15078 2479 aa22.24■■□□□ 1.15
RHBDD3-201ENST00000216085 LTBP2Q14767 1821 aa22.24■■□□□ 1.15
RHBDD3-201ENST00000216085 K7ERI5 159 aa22.24■■□□□ 1.15
RHBDD3-201ENST00000216085 SLC16A4O15374 487 aa22.24■■□□□ 1.15
RHBDD3-201ENST00000216085 RPN1P04843 607 aaKnown RBP22.24■■□□□ 1.15
RHBDD3-201ENST00000216085 CASP1P29466 404 aa22.24■■□□□ 1.15
RHBDD3-201ENST00000216085 NCKAP1LP55160 1127 aa22.24■■□□□ 1.15
RHBDD3-201ENST00000216085 MDM2Q00987 491 aaPredicted RBP22.24■■□□□ 1.15
RHBDD3-201ENST00000216085 DPYDQ12882 1025 aa22.24■■□□□ 1.15
RHBDD3-201ENST00000216085 NFX1Q12986 1120 aaKnown RBP22.24■■□□□ 1.15
RHBDD3-201ENST00000216085 PSRC1Q6PGN9 363 aaPredicted RBP22.24■■□□□ 1.15
RHBDD3-201ENST00000216085 PRIMPOLQ96LW4 560 aa22.24■■□□□ 1.15
RHBDD3-201ENST00000216085 KIFC3Q9BVG8 833 aa22.24■■□□□ 1.15
RHBDD3-201ENST00000216085 FTHL17Q9BXU8 183 aa22.24■■□□□ 1.15
RHBDD3-201ENST00000216085 TMEM134Q9H6X4 195 aa22.24■■□□□ 1.15
RHBDD3-201ENST00000216085 ARHGAP28Q9P2N2 729 aa22.24■■□□□ 1.15
RHBDD3-201ENST00000216085 CD52P31358 61 aa22.23■■□□□ 1.15
RHBDD3-201ENST00000216085 MBTD1Q05BQ5 628 aa22.23■■□□□ 1.15
RHBDD3-201ENST00000216085 PNOCQ13519 176 aa22.23■■□□□ 1.15
RHBDD3-201ENST00000216085 TMEM132AQ24JP5 1023 aa22.23■■□□□ 1.15
RHBDD3-201ENST00000216085 PLEKHG4Q58EX7 1191 aa22.23■■□□□ 1.15
RHBDD3-201ENST00000216085 FAM26FQ5R3K3 315 aa22.23■■□□□ 1.15
RHBDD3-201ENST00000216085 FAM228AQ86W67 206 aa22.23■■□□□ 1.15
RHBDD3-201ENST00000216085 SMARCE1Q969G3 411 aa22.23■■□□□ 1.15
RHBDD3-201ENST00000216085 NUP62CLQ9H1M0 184 aa22.23■■□□□ 1.15
RHBDD3-201ENST00000216085 PADI3Q9ULW8 664 aa22.23■■□□□ 1.15
RHBDD3-201ENST00000216085 ST3GAL5Q9UNP4 418 aa22.23■■□□□ 1.15
RHBDD3-201ENST00000216085 DENND3A2RUS2 1198 aa22.22■■□□□ 1.15
RHBDD3-201ENST00000216085 PRR29P0C7W0 189 aa22.22■■□□□ 1.15
RHBDD3-201ENST00000216085 PSMD2Q13200 908 aa22.22■■□□□ 1.15
RHBDD3-201ENST00000216085 PDE4DIPQ5VU43 2346 aa22.22■■□□□ 1.15
RHBDD3-201ENST00000216085 CNKSR3Q6P9H4 555 aa22.22■■□□□ 1.15
RHBDD3-201ENST00000216085 HAUS6Q7Z4H7 955 aa22.22■■□□□ 1.15
RHBDD3-201ENST00000216085 TMEM161BQ8NDZ6 487 aa22.22■■□□□ 1.15
RHBDD3-201ENST00000216085 GTPBP4Q9BZE4 634 aaKnown RBP22.22■■□□□ 1.15
RHBDD3-201ENST00000216085 SIP14410 1827 aa22.22■■□□□ 1.15
RHBDD3-201ENST00000216085 EFCAB14O75071 495 aa22.22■■□□□ 1.15
RHBDD3-201ENST00000216085 GCNT3O95395 438 aa22.22■■□□□ 1.15
RHBDD3-201ENST00000216085 PRKCBP05771 671 aa22.22■■□□□ 1.15
RHBDD3-201ENST00000216085 ZSCAN20P17040 1043 aaPredicted RBP22.22■■□□□ 1.15
RHBDD3-201ENST00000216085 GPT2Q8TD30 523 aa22.22■■□□□ 1.15
RHBDD3-201ENST00000216085 HVCN1Q96D96 273 aa22.22■■□□□ 1.15
RHBDD3-201ENST00000216085 GSDMAQ96QA5 445 aa22.22■■□□□ 1.15
RHBDD3-201ENST00000216085 CLSTN2Q9H4D0 955 aa22.22■■□□□ 1.15
RHBDD3-201ENST00000216085 ST6GALNAC4Q9H4F1 302 aa22.22■■□□□ 1.15
RHBDD3-201ENST00000216085 AGO3Q9H9G7 860 aaKnown RBP22.22■■□□□ 1.15
RHBDD3-201ENST00000216085 PCDHB13Q9Y5F0 798 aa22.22■■□□□ 1.15
RHBDD3-201ENST00000216085 ADGRA3Q8IWK6 1321 aa22.22■■□□□ 1.15
RHBDD3-201ENST00000216085 AXLP30530 894 aa22.21■■□□□ 1.15
RHBDD3-201ENST00000216085 KCNB1Q14721 858 aa22.21■■□□□ 1.15
RHBDD3-201ENST00000216085 FAM187BQ17R55 369 aa22.21■■□□□ 1.15
RHBDD3-201ENST00000216085 KMT5BQ4FZB7 885 aa22.21■■□□□ 1.15
RHBDD3-201ENST00000216085 PPP4R3CPQ6ZMV5 832 aa22.21■■□□□ 1.15
RHBDD3-201ENST00000216085 DBF4BQ8NFT6 615 aa22.21■■□□□ 1.15
RHBDD3-201ENST00000216085 SYAP1Q96A49 352 aaPredicted RBP22.21■■□□□ 1.15
RHBDD3-201ENST00000216085 MTIF3Q9H2K0 278 aaKnown RBP22.21■■□□□ 1.15
RHBDD3-201ENST00000216085 MINDY3Q9H8M7 445 aa22.21■■□□□ 1.15
RHBDD3-201ENST00000216085 ERVK-5Q9HDB9 667 aa22.21■■□□□ 1.15
RHBDD3-201ENST00000216085 TBC1D7Q9P0N9 293 aa22.21■■□□□ 1.15
RHBDD3-201ENST00000216085 H0YGN5 161 aa22.2■■□□□ 1.14
RHBDD3-201ENST00000216085 CSDE1O75534 798 aaKnown RBP22.2■■□□□ 1.14
RHBDD3-201ENST00000216085 MAGEA10P43363 369 aaPredicted RBP22.2■■□□□ 1.14
RHBDD3-201ENST00000216085 PRPF4BQ13523 1007 aaKnown RBP22.2■■□□□ 1.14
RHBDD3-201ENST00000216085 IKBKEQ14164 716 aa22.2■■□□□ 1.14
RHBDD3-201ENST00000216085 CAMK4Q16566 473 aa22.2■■□□□ 1.14
RHBDD3-201ENST00000216085 ZNF720Q7Z2F6 126 aa22.2■■□□□ 1.14
RHBDD3-201ENST00000216085 KCNN1Q92952 543 aa22.2■■□□□ 1.14
RHBDD3-201ENST00000216085 CCDC113Q9H0I3 377 aa22.2■■□□□ 1.14
RHBDD3-201ENST00000216085 FZD8Q9H461 694 aa22.2■■□□□ 1.14
RHBDD3-201ENST00000216085 CHST12Q9NRB3 414 aa22.2■■□□□ 1.14
RHBDD3-201ENST00000216085 AGPAT5Q9NUQ2 364 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms