RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 RABGAP1Q9Y3P9 1069 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 GAKO14976 1311 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 SLC16A3O15427 465 aaKnown RBP11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 RPSAP08865 295 aaKnown RBP11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 CLTAP09496 248 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 IL1R1P14778 569 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 SHMT1P34896 483 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 PEX19P40855 299 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 PPATQ06203 517 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 MKRN4PQ13434 485 aaPredicted RBP11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 LACTB2Q53H82 288 aaPredicted RBP11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 ARMC3Q5W041 872 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 FAM196AQ6ZSG2 479 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 CCDC50Q8IVM0 306 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 SLC30A5Q8TAD4 765 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 ETNPPLQ8TBG4 499 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 EPS8L3Q8TE67 593 aaKnown RBP11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 STK33Q9BYT3 514 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 CARD9Q9H257 536 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 KDM4CQ9H3R0 1056 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 SAMD15Q9P1V8 674 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 CD2APQ9Y5K6 639 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 FAM86B1E9PN63 330 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 FAM86B2P0C5J1 330 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 HOXA13P31271 388 aaPredicted RBP11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 FMO5P49326 533 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 CCNHP51946 323 aaPredicted RBP11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 KLRC3Q07444 240 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 XRCC4Q13426 336 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 CBWD6Q4V339 395 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 CBWD3Q5JTY5 395 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 CBWD5Q5RIA9 395 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 TBC1D1Q86TI0 1168 aaPredicted RBP11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 CCDC63Q8NA47 563 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 MGARPQ8TDB4 240 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 THOC1Q96FV9 657 aaKnown RBP11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 TXLNGYQ9BZA5 131 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 MTFR1LQ9H019 292 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 POLLQ9UGP5 575 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 COG5Q9UP83 839 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 PTPN22Q9Y2R2 807 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 ALG6Q9Y672 507 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 PLIN4Q96Q06 1357 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 MEIS2O14770 477 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 KIAA0391O15091 583 aaKnown RBP11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 AP1G2O75843 785 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 GCKP35557 465 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 MARCKSL1P49006 195 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 CLNS1AP54105 237 aaKnown RBP11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 MAPK7Q13164 816 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 TPH2Q8IWU9 490 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 KRT35Q92764 455 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 DBR1Q9UK59 544 aaKnown RBP11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 TTC7AQ9ULT0 858 aaPredicted RBP11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 MYO3BQ8WXR4 1341 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 FAM187AA6NFU0 413 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 ZBTB39O15060 712 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 ELF3P78545 371 aaPredicted RBP11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 SLFN13Q68D06 897 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 ZNF746Q6NUN9 644 aaPredicted RBP11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 ZDHHC24Q6UX98 284 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 DYDC1Q8WWB3 177 aa11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 ZNF317Q96PQ6 595 aaPredicted RBP11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 EIF2AK1Q9BQI3 630 aaKnown RBP11.35□□□□□ -0.59
CX3CL1-201ENST00000006053 CYP3A7-CYP3A51PA0A087WV96 503 aa11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 EML1O00423 815 aa11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 NCANO14594 1321 aa11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 C21orf2O43822 256 aa11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 CYP3A7P24462 503 aa11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 RPL21P46778 160 aaKnown RBP11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 MESDQ14696 234 aa11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 LRRC14Q15048 493 aa11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 WLSQ5T9L3 541 aa11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 RINT1Q6NUQ1 792 aa11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 OLIG1Q8TAK6 271 aa11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 SLC20A1Q8WUM9 679 aa11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 ATXN2LQ8WWM7 1075 aaKnown RBP11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 P3H4Q92791 437 aa11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 INTS2Q9H0H0 1204 aaKnown RBP11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 GLT8D2Q9H1C3 349 aa11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 MTRF1LQ9UGC7 380 aaKnown RBP11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 DIS3Q9Y2L1 958 aaKnown RBP11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 GTPBP10A4D1E9 387 aaKnown RBP11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 MSH4O15457 936 aa11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 PPIP5K2O43314 1243 aa11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 DNAJC8O75937 253 aaPredicted RBP11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 HLA-DOAP06340 250 aa11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 NUDT17P0C025 328 aa11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 GHRP10912 638 aa11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 MMP13P45452 471 aa11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 DHX34Q14147 1143 aaKnown RBP11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 PPP2R5EQ16537 467 aa11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 ZC3H12AQ5D1E8 599 aaKnown RBP11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 RC3H1Q5TC82 1133 aaKnown RBP11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 C15orf52Q6ZUT6 534 aaKnown RBP11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 OTUD6AQ7L8S5 288 aa11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 CENPTQ96BT3 561 aa11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 ADAM7Q9H2U9 754 aa11.34□□□□□ -0.59
CX3CL1-201ENST00000006053 NOD2Q9HC29 1040 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms