RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Nap1l4Q78ZA7 375 aaKnown RBP12.99□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Zswim5Q80TC6 1188 aa12.99□□□□□ -0.33
Ufd1-201ENSMUST00000005394 BoraQ8BS90 525 aa12.99□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Rbbp5Q8BX09 538 aaKnown RBP12.99□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Epn2Q8CHU3 595 aa12.99□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Fkbp6Q91XW8 327 aa12.99□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Snx24Q9CRB0 169 aa12.99□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Krtap5-3Q9D226 196 aa12.99□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Rab11fip1Q9D620 645 aa12.99□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Cse1lQ9ERK4 971 aaKnown RBP12.99□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Adarb2Q9JI20 745 aa12.99□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Adrm1Q9JKV1 407 aa12.99□□□□□ -0.33
Ufd1-201ENSMUST00000005394 PodxlQ9R0M4 503 aa12.99□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Ltn1Q6A009 1767 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Fbf1A2A870 1173 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Gm2030D3Z7C4 212 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Lrrc32G3XA59 663 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Unc5cO08747 931 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Casp1P29452 402 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Nr2f2P43135 414 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Cdc25aP48964 514 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Ppp4cP97470 307 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 SfswapQ3USH5 945 aaKnown RBP12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Madcam1Q61826 405 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Chtf18Q8BIW9 969 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Wdr35Q8BND3 1181 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Fsd1lQ8BYN5 507 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Ttc16Q8C1F5 767 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Hectd2Q8CDU6 774 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Mcur1Q9CXD6 340 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Ftsj3Q9DBE9 838 aaKnown RBP12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Nlrp5Q9R1M5 1163 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Epb41l3Q9WV92 929 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 6030498E09RikB1AX85 169 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Ccdc170D3YXL0 722 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Akr1b8P45377 316 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 NfixP70257 488 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Ces3aQ63880 571 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Herc4Q6PAV2 1057 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Wasf2Q8BH43 497 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Gcfc2Q8BKT3 769 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Stxbp5Q8K400 1152 aaKnown RBP12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Rpap2Q8VC34 614 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Ces3bQ8VCU1 571 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Cep19Q9CQA8 163 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Setd6Q9CWY3 473 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Dydc2Q9D3X8 139 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Scgb2b20Q9JI02 112 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Nap1l5Q9JJF0 156 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Pard6bQ9JK83 371 aa12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Orc1Q9Z1N2 840 aaKnown RBP12.98□□□□□ -0.33
Ufd1-201ENSMUST00000005394 RptorQ8K4Q0 1335 aa12.97□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Fam155bA2BDP1 471 aa12.97□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Gm10110D3Z5M2 615 aa12.97□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Rgsl1H3BL40 1073 aa12.97□□□□□ -0.33
Ufd1-201ENSMUST00000005394 UncxO08934 530 aa12.97□□□□□ -0.33
Ufd1-201ENSMUST00000005394 PgfP49764 158 aa12.97□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Slc1a1P51906 523 aa12.97□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Calb2Q08331 271 aa12.97□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Zc3h18Q0P678 948 aaKnown RBP12.97□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Fam8a1Q3URQ4 399 aa12.97□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Gm5592Q3V0A6 857 aa12.97□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Garnl3Q3V0G7 1038 aa12.97□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Syce2Q505B8 171 aa12.97□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Kif5bQ61768 963 aa12.97□□□□□ -0.33
Ufd1-201ENSMUST00000005394 MogsQ80UM7 834 aaKnown RBP12.97□□□□□ -0.33
Ufd1-201ENSMUST00000005394 RbakQ8BQC8 711 aa12.97□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Rab11fip4Q8BQP8 635 aa12.97□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Tmem120aQ8C1E7 343 aa12.97□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Erich5Q8K0S2 362 aa12.97□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Ctnnbl1Q9CWL8 563 aaKnown RBP12.97□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Gucy1a3Q9ERL9 691 aa12.97□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Gm6583E9Q8Z1 469 aa12.96□□□□□ -0.33
Ufd1-201ENSMUST00000005394 PrlP06879 226 aa12.96□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Rpl13P47963 211 aaKnown RBP12.96□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Rps8P62242 208 aaKnown RBP12.96□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Gdf10P97737 476 aa12.96□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Ect2Q07139 913 aa12.96□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Rpusd2Q149F1 553 aa12.96□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Trip13Q3UA06 432 aa12.96□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Ccdc160Q3UYG1 323 aa12.96□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Soat1Q61263 540 aa12.96□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Tmc8Q7TN58 722 aa12.96□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Trerf1Q8BXJ2 1205 aa12.96□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Cabs1Q8C633 391 aa12.96□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Cttnbp2nlQ99LJ0 638 aa12.96□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Dynll2Q9D0M5 89 aa12.96□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Popdc2Q9ES82 367 aa12.96□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Myoz2Q9JJW5 264 aa12.96□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Uchl3Q9JKB1 230 aa12.96□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Cyp39a1Q9JKJ9 470 aa12.96□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Sertad1Q9JL10 236 aa12.96□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Plagl1Q9JLQ4 704 aa12.96□□□□□ -0.33
Ufd1-201ENSMUST00000005394 AuhQ9JLZ3 314 aa12.96□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Itgb1bp2Q9R000 350 aa12.96□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Gabbr1Q9WV18 960 aa12.96□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Lgr5Q9Z1P4 907 aa12.96□□□□□ -0.33
Ufd1-201ENSMUST00000005394 Gpr161B2RPY5 545 aa12.96□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Nfxl1E9Q8I7 918 aaKnown RBP12.96□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Usp35M0QWN7 1009 aa12.96□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms