RNA–Protein interactions for RNA: ENST00000640154.1

CGREF1-209, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 5 BASIC

Gene CGREF1, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-209ENST00000640154 C11orf84Q9BUA3 381 aaPredicted RBP13.54□□□□□ -0.24
CGREF1-209ENST00000640154 TRAIPQ9BWF2 469 aa13.54□□□□□ -0.24
CGREF1-209ENST00000640154 ATP6V0A4Q9HBG4 840 aa13.54□□□□□ -0.24
CGREF1-209ENST00000640154 IFT122Q9HBG6 1241 aa13.54□□□□□ -0.24
CGREF1-209ENST00000640154 XPNPEP1Q9NQW7 623 aa13.54□□□□□ -0.24
CGREF1-209ENST00000640154 COG5Q9UP83 839 aa13.54□□□□□ -0.24
CGREF1-209ENST00000640154 TCF20Q9UGU0 1960 aaKnown RBP13.54□□□□□ -0.24
CGREF1-209ENST00000640154 A0A0U1RQF3 1178 aa13.53□□□□□ -0.24
CGREF1-209ENST00000640154 DLL1O00548 723 aa13.53□□□□□ -0.24
CGREF1-209ENST00000640154 DGAT1O75907 488 aa13.53□□□□□ -0.24
CGREF1-209ENST00000640154 TECP42680 631 aa13.53□□□□□ -0.24
CGREF1-209ENST00000640154 RARRES1P49788 294 aa13.53□□□□□ -0.24
CGREF1-209ENST00000640154 FXR2P51116 673 aaKnown RBP eCLIP13.53□□□□□ -0.24
CGREF1-209ENST00000640154 MRPS5P82675 430 aaKnown RBP13.53□□□□□ -0.24
CGREF1-209ENST00000640154 NBR1Q14596 966 aa13.53□□□□□ -0.24
CGREF1-209ENST00000640154 PAN2Q504Q3 1202 aaKnown RBP13.53□□□□□ -0.24
CGREF1-209ENST00000640154 TJAP1Q5JTD0 557 aa13.53□□□□□ -0.24
CGREF1-209ENST00000640154 FAM102BQ5T8I3 360 aa13.53□□□□□ -0.24
CGREF1-209ENST00000640154 SRGAP1Q7Z6B7 1085 aa13.53□□□□□ -0.24
CGREF1-209ENST00000640154 ZNF598Q86UK7 904 aaKnown RBP13.53□□□□□ -0.24
CGREF1-209ENST00000640154 FERMT3Q86UX7 667 aa13.53□□□□□ -0.24
CGREF1-209ENST00000640154 CATSPER3Q86XQ3 398 aa13.53□□□□□ -0.24
CGREF1-209ENST00000640154 ECHDC2Q86YB7 292 aa13.53□□□□□ -0.24
CGREF1-209ENST00000640154 NLRP4Q96MN2 994 aa13.53□□□□□ -0.24
CGREF1-209ENST00000640154 MTRQ99707 1265 aa13.53□□□□□ -0.24
CGREF1-209ENST00000640154 COL25A1Q9BXS0 654 aaPredicted RBP13.53□□□□□ -0.24
CGREF1-209ENST00000640154 LMAN2LQ9H0V9 348 aa13.53□□□□□ -0.24
CGREF1-209ENST00000640154 RNF19AQ9NV58 838 aa13.53□□□□□ -0.24
CGREF1-209ENST00000640154 DACT1Q9NYF0 836 aa13.53□□□□□ -0.24
CGREF1-209ENST00000640154 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.53□□□□□ -0.24
CGREF1-209ENST00000640154 PLXNA4Q9HCM2 1894 aa13.53□□□□□ -0.24
CGREF1-209ENST00000640154 TBKBP1A7MCY6 615 aa13.52□□□□□ -0.25
CGREF1-209ENST00000640154 GRM6O15303 877 aa13.52□□□□□ -0.25
CGREF1-209ENST00000640154 HOXA2O43364 376 aa13.52□□□□□ -0.25
CGREF1-209ENST00000640154 MED24O75448 989 aa13.52□□□□□ -0.25
CGREF1-209ENST00000640154 EOMESO95936 686 aa13.52□□□□□ -0.25
CGREF1-209ENST00000640154 MUTP22033 750 aa13.52□□□□□ -0.25
CGREF1-209ENST00000640154 RPA1P27694 616 aa13.52□□□□□ -0.25
CGREF1-209ENST00000640154 POU5F1BQ06416 359 aa13.52□□□□□ -0.25
CGREF1-209ENST00000640154 PTGDRQ13258 359 aa13.52□□□□□ -0.25
CGREF1-209ENST00000640154 CUL4AQ13619 759 aa13.52□□□□□ -0.25
CGREF1-209ENST00000640154 PDIA5Q14554 519 aa13.52□□□□□ -0.25
CGREF1-209ENST00000640154 MXD4Q14582 209 aaPredicted RBP13.52□□□□□ -0.25
CGREF1-209ENST00000640154 TIGD5Q53EQ6 642 aa13.52□□□□□ -0.25
CGREF1-209ENST00000640154 ERMNQ8TAM6 284 aa13.52□□□□□ -0.25
CGREF1-209ENST00000640154 PIGOQ8TEQ8 1089 aa13.52□□□□□ -0.25
CGREF1-209ENST00000640154 ASB2Q96Q27 587 aa13.52□□□□□ -0.25
CGREF1-209ENST00000640154 NACC1Q96RE7 527 aa13.52□□□□□ -0.25
CGREF1-209ENST00000640154 TMEM117Q9H0C3 514 aa13.52□□□□□ -0.25
CGREF1-209ENST00000640154 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.52□□□□□ -0.25
CGREF1-209ENST00000640154 BMP2KQ9NSY1 1161 aaPredicted RBP13.52□□□□□ -0.25
CGREF1-209ENST00000640154 DBR1Q9UK59 544 aaKnown RBP13.52□□□□□ -0.25
CGREF1-209ENST00000640154 SMC3Q9UQE7 1217 aa13.52□□□□□ -0.25
CGREF1-209ENST00000640154 PCDHB6Q9Y5E3 794 aa13.52□□□□□ -0.25
CGREF1-209ENST00000640154 LAD1O00515 517 aa13.51□□□□□ -0.25
CGREF1-209ENST00000640154 SRGAP2CP0DJJ0 459 aa13.51□□□□□ -0.25
CGREF1-209ENST00000640154 FGFR1P11362 822 aa13.51□□□□□ -0.25
CGREF1-209ENST00000640154 ATF7P17544 494 aaPredicted RBP13.51□□□□□ -0.25
CGREF1-209ENST00000640154 IBSPP21815 317 aaPredicted RBP13.51□□□□□ -0.25
CGREF1-209ENST00000640154 ARL2P36404 184 aa13.51□□□□□ -0.25
CGREF1-209ENST00000640154 PRPHP41219 470 aa13.51□□□□□ -0.25
CGREF1-209ENST00000640154 PHKA2P46019 1235 aa13.51□□□□□ -0.25
CGREF1-209ENST00000640154 SKIV2LQ15477 1246 aaKnown RBP13.51□□□□□ -0.25
CGREF1-209ENST00000640154 RILPL1Q5EBL4 403 aa13.51□□□□□ -0.25
CGREF1-209ENST00000640154 MCTP1Q6DN14 999 aa13.51□□□□□ -0.25
CGREF1-209ENST00000640154 CATSPER4Q7RTX7 472 aa13.51□□□□□ -0.25
CGREF1-209ENST00000640154 IFNLR1Q8IU57 520 aaPredicted RBP13.51□□□□□ -0.25
CGREF1-209ENST00000640154 IGSF22Q8N9C0 903 aa13.51□□□□□ -0.25
CGREF1-209ENST00000640154 SYMPKQ92797 1274 aaKnown RBP13.51□□□□□ -0.25
CGREF1-209ENST00000640154 HLA-CQ95604 372 aa13.51□□□□□ -0.25
CGREF1-209ENST00000640154 CCDC43Q96MW1 224 aaKnown RBP13.51□□□□□ -0.25
CGREF1-209ENST00000640154 MINDY3Q9H8M7 445 aa13.51□□□□□ -0.25
CGREF1-209ENST00000640154 AGPAT5Q9NUQ2 364 aa13.51□□□□□ -0.25
CGREF1-209ENST00000640154 PLAGL2Q9UPG8 496 aa13.51□□□□□ -0.25
CGREF1-209ENST00000640154 H3BQV1 296 aa13.5□□□□□ -0.25
CGREF1-209ENST00000640154 ZNF623O75123 536 aa13.5□□□□□ -0.25
CGREF1-209ENST00000640154 ITGB1P05556 798 aa13.5□□□□□ -0.25
CGREF1-209ENST00000640154 SKIP12755 728 aa13.5□□□□□ -0.25
CGREF1-209ENST00000640154 HOXA11P31270 313 aaPredicted RBP13.5□□□□□ -0.25
CGREF1-209ENST00000640154 PTENP60484 403 aa13.5□□□□□ -0.25
CGREF1-209ENST00000640154 COL19A1Q14993 1142 aa13.5□□□□□ -0.25
CGREF1-209ENST00000640154 PCBP1Q15365 356 aaKnown RBP eCLIP13.5□□□□□ -0.25
CGREF1-209ENST00000640154 AAK1Q2M2I8 961 aa13.5□□□□□ -0.25
CGREF1-209ENST00000640154 CLLU1OSQ5K130 101 aa13.5□□□□□ -0.25
CGREF1-209ENST00000640154 HAUS3Q68CZ6 603 aa13.5□□□□□ -0.25
CGREF1-209ENST00000640154 POTEGQ6S5H5 508 aa13.5□□□□□ -0.25
CGREF1-209ENST00000640154 KLHL23Q8NBE8 558 aa13.5□□□□□ -0.25
CGREF1-209ENST00000640154 RNF149Q8NC42 400 aa13.5□□□□□ -0.25
CGREF1-209ENST00000640154 SPPL3Q8TCT6 385 aa13.5□□□□□ -0.25
CGREF1-209ENST00000640154 RSPH1Q8WYR4 309 aa13.5□□□□□ -0.25
CGREF1-209ENST00000640154 CASD1Q96PB1 797 aa13.5□□□□□ -0.25
CGREF1-209ENST00000640154 NFKBIZQ9BYH8 718 aa13.5□□□□□ -0.25
CGREF1-209ENST00000640154 RAB34Q9BZG1 259 aa13.5□□□□□ -0.25
CGREF1-209ENST00000640154 NSUN3Q9H649 340 aaKnown RBP13.5□□□□□ -0.25
CGREF1-209ENST00000640154 CWH43Q9H720 699 aa13.5□□□□□ -0.25
CGREF1-209ENST00000640154 AAASQ9NRG9 546 aa13.5□□□□□ -0.25
CGREF1-209ENST00000640154 TYW1Q9NV66 732 aaKnown RBP13.5□□□□□ -0.25
CGREF1-209ENST00000640154 LRWD1Q9UFC0 647 aa13.5□□□□□ -0.25
CGREF1-209ENST00000640154 PIN4Q9Y237 131 aaKnown RBP13.5□□□□□ -0.25
CGREF1-209ENST00000640154 STK24Q9Y6E0 443 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms