RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 PFKPQ01813 784 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 TTF1Q15361 905 aaPredicted RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 MAPKAPK3Q16644 382 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 SGSM1Q2NKQ1 1148 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 CWF19L2Q2TBE0 894 aaKnown RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 P3H1Q32P28 736 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 TTC23LQ6PF05 361 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 VSIG1Q86XK7 387 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 ATP13A3Q9H7F0 1226 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 FAM204AQ9H8W3 233 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 MCM9Q9NXL9 1143 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 SNX6Q9UNH7 406 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 NCOA3Q9Y6Q9 1424 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 TNIKQ9UKE5 1360 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 LRRIQ4A6NIV6 560 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 RNF113AO15541 343 aaKnown RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 SCGB1D2O95969 90 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 CD4P01730 458 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 MT-ND3P03897 115 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 NPR1P16066 1061 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 VCLP18206 1134 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 TMPRSS15P98073 1019 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 ANKRD39Q53RE8 183 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 MZT2AQ6P582 158 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 POMZP3Q6PJE2 187 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 ZSCAN29Q8IWY8 852 aaPredicted RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 OR8K3Q8NH51 312 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 GOT1L1Q8NHS2 421 aaPredicted RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 TTC8Q8TAM2 541 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 CHMP6Q96FZ7 201 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 NOX5Q96PH1 765 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 SRPK1Q96SB4 655 aaKnown RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 ZBED2Q9BTP6 218 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 ARHGEF38Q9NXL2 777 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 ZIM2Q9NZV7 527 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 SAMD15Q9P1V8 674 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 GSTTP1A0A1W2PQM5 241 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 FAM47E-STBD1D6RA91 191 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 HNRNPRO43390 633 aaKnown RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 CAPNS1P04632 268 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 CAP1Q01518 475 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 PPP1R15BQ5SWA1 713 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 SLC2A7Q6PXP3 512 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 MRPL1Q9BYD6 325 aaKnown RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 UBE2OQ9C0C9 1292 aaKnown RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 SLC38A10Q9HBR0 1119 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 HYPKQ9NX55 129 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 IPPQ9Y573 584 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 WDR7Q9Y4E6 1490 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 KIF21AQ7Z4S6 1674 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 POTEB3A0JP26 581 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 THAP12O43422 761 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 ADAMTS4O75173 837 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 ALAS1P13196 640 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 TARSP26639 723 aaKnown RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 OCA2Q04671 838 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 DCTN2Q13561 401 aaKnown RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 CYTH1Q15438 398 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 PRPF40BQ6NWY9 871 aaKnown RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 POTEBQ6S5H4 581 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 SLC51BQ86UW2 128 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 BCAS4Q8TDM0 211 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 IRGQQ8WZA9 623 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 HERVK_113Q902F9 699 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 KIFC2Q96AC6 838 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 CIDECQ96AQ7 238 aaPredicted RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 C15orf38-AP3S2A0A0A6YYH1 394 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 POM121CA8CG34 1229 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 B8ZZF3 427 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 ATP2A2P16615 1042 aaKnown RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 VARSP26640 1264 aaKnown RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 PBLDP30039 288 aaPredicted RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 ATP11AP98196 1134 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 SNW1Q13573 536 aaKnown RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 ADRM1Q16186 407 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 SHROOM1Q2M3G4 852 aaPredicted RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 WSCD2Q2TBF2 565 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 ARL13BQ3SXY8 428 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 PPP2R2DQ66LE6 453 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 C16orf54Q6UWD8 224 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 C3orf67Q6ZVT6 689 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 EEPD1Q7L9B9 569 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 NSUN7Q8NE18 718 aaKnown RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 USP40Q9NVE5 1235 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 THAP1Q9NVV9 213 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 STMN3Q9NZ72 180 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 ORC3Q9UBD5 711 aaPredicted RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 YLPM1P49750 1951 aaKnown RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 CRYZL1O95825 349 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 CDH3P22223 829 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 CRY1Q16526 586 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 FBXO48Q5FWF7 155 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 OR7G1Q8NGA0 311 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 SLC7A3Q8WY07 619 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 RILPL2Q969X0 211 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 PLVAPQ9BX97 442 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 DCTPP1Q9H773 170 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 POLMQ9NP87 494 aaPredicted RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 CTTNBP2NLQ9P2B4 639 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 ARHGAP28Q9P2N2 729 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms