RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 CLIC6Q96NY7 704 aa24.22■■□□□ 1.47
SCN1B-206ENST00000638536 CERS4Q9HA82 394 aa24.22■■□□□ 1.47
SCN1B-206ENST00000638536 FBXO2Q9UK22 296 aaPredicted RBP24.22■■□□□ 1.47
SCN1B-206ENST00000638536 ZDHHC9Q9Y397 364 aa24.22■■□□□ 1.47
SCN1B-206ENST00000638536 ARHGEF35A5YM69 484 aa24.21■■□□□ 1.47
SCN1B-206ENST00000638536 F13A1P00488 732 aa24.21■■□□□ 1.47
SCN1B-206ENST00000638536 GLRA2P23416 452 aa24.21■■□□□ 1.47
SCN1B-206ENST00000638536 TAP1Q03518 808 aa24.21■■□□□ 1.47
SCN1B-206ENST00000638536 HYIQ5T013 277 aa24.21■■□□□ 1.47
SCN1B-206ENST00000638536 PPP2R2DQ66LE6 453 aa24.21■■□□□ 1.47
SCN1B-206ENST00000638536 RNF149Q8NC42 400 aa24.21■■□□□ 1.47
SCN1B-206ENST00000638536 POLR3FQ9H1D9 316 aaPredicted RBP24.21■■□□□ 1.47
SCN1B-206ENST00000638536 RGS18Q9NS28 235 aa24.21■■□□□ 1.47
SCN1B-206ENST00000638536 STK24Q9Y6E0 443 aa24.21■■□□□ 1.47
SCN1B-206ENST00000638536 TMEM265A0A087WTH1 108 aa24.21■■□□□ 1.47
SCN1B-206ENST00000638536 CDC42EP1Q00587 391 aa24.21■■□□□ 1.47
SCN1B-206ENST00000638536 CAPSQ13938 189 aa24.21■■□□□ 1.47
SCN1B-206ENST00000638536 CABP7Q86V35 215 aa24.21■■□□□ 1.47
SCN1B-206ENST00000638536 CDX2Q99626 313 aaPredicted RBP24.21■■□□□ 1.47
SCN1B-206ENST00000638536 CSRNP2Q9H175 543 aa24.21■■□□□ 1.47
SCN1B-206ENST00000638536 CYP11B2P19099 503 aa24.2■■□□□ 1.46
SCN1B-206ENST00000638536 BSNDQ8WZ55 320 aa24.2■■□□□ 1.46
SCN1B-206ENST00000638536 DNM3Q9UQ16 869 aa24.2■■□□□ 1.46
SCN1B-206ENST00000638536 TCHHQ07283 1943 aa24.2■■□□□ 1.46
SCN1B-206ENST00000638536 FNDC1Q4ZHG4 1894 aaPredicted RBP24.2■■□□□ 1.46
SCN1B-206ENST00000638536 DENND3A2RUS2 1198 aa24.19■■□□□ 1.46
SCN1B-206ENST00000638536 C9IYK1 514 aa24.19■■□□□ 1.46
SCN1B-206ENST00000638536 ASAP2O43150 1006 aa24.19■■□□□ 1.46
SCN1B-206ENST00000638536 EYA4O95677 639 aa24.19■■□□□ 1.46
SCN1B-206ENST00000638536 LONP1P36776 959 aaKnown RBP24.19■■□□□ 1.46
SCN1B-206ENST00000638536 GATMP50440 423 aa24.19■■□□□ 1.46
SCN1B-206ENST00000638536 SLC39A14Q15043 492 aa24.19■■□□□ 1.46
SCN1B-206ENST00000638536 TMEM119Q4V9L6 283 aa24.19■■□□□ 1.46
SCN1B-206ENST00000638536 FAM102BQ5T8I3 360 aa24.19■■□□□ 1.46
SCN1B-206ENST00000638536 EPSTI1Q96J88 318 aa24.19■■□□□ 1.46
SCN1B-206ENST00000638536 CHAMP1Q96JM3 812 aa24.19■■□□□ 1.46
SCN1B-206ENST00000638536 AK8Q96MA6 479 aa24.19■■□□□ 1.46
SCN1B-206ENST00000638536 PRDM12Q9H4Q4 367 aa24.19■■□□□ 1.46
SCN1B-206ENST00000638536 RC3H2Q9HBD1 1191 aaKnown RBP24.19■■□□□ 1.46
SCN1B-206ENST00000638536 DAXXQ9UER7 740 aaPredicted RBP24.19■■□□□ 1.46
SCN1B-206ENST00000638536 INSL6Q9Y581 213 aa24.19■■□□□ 1.46
SCN1B-206ENST00000638536 SRPRBQ9Y5M8 271 aaKnown RBP24.19■■□□□ 1.46
SCN1B-206ENST00000638536 MYH11P35749 1972 aa24.19■■□□□ 1.46
SCN1B-206ENST00000638536 NLRC5Q86WI3 1866 aa24.19■■□□□ 1.46
SCN1B-206ENST00000638536 LINC01553A4QN01 128 aa24.18■■□□□ 1.46
SCN1B-206ENST00000638536 EPOPA6NHQ4 379 aa24.18■■□□□ 1.46
SCN1B-206ENST00000638536 NASPP49321 788 aaPredicted RBP24.18■■□□□ 1.46
SCN1B-206ENST00000638536 MXD4Q14582 209 aaPredicted RBP24.18■■□□□ 1.46
SCN1B-206ENST00000638536 ODR4Q5SWX8 454 aa24.18■■□□□ 1.46
SCN1B-206ENST00000638536 LINC00301Q8NCQ3 95 aa24.18■■□□□ 1.46
SCN1B-206ENST00000638536 MYLIPQ8WY64 445 aa24.18■■□□□ 1.46
SCN1B-206ENST00000638536 YME1L1Q96TA2 773 aa24.18■■□□□ 1.46
SCN1B-206ENST00000638536 RUSC1Q9BVN2 902 aa24.18■■□□□ 1.46
SCN1B-206ENST00000638536 RFXAPO00287 272 aa24.17■■□□□ 1.46
SCN1B-206ENST00000638536 SLC34A2O95436 690 aa24.17■■□□□ 1.46
SCN1B-206ENST00000638536 SARSP49591 514 aaKnown RBP24.17■■□□□ 1.46
SCN1B-206ENST00000638536 PTENP60484 403 aa24.17■■□□□ 1.46
SCN1B-206ENST00000638536 KARSQ15046 597 aaKnown RBP24.17■■□□□ 1.46
SCN1B-206ENST00000638536 MCPH1Q8NEM0 835 aa24.17■■□□□ 1.46
SCN1B-206ENST00000638536 SP7Q8TDD2 431 aaPredicted RBP24.17■■□□□ 1.46
SCN1B-206ENST00000638536 PRRC2BQ5JSZ5 2229 aaKnown RBP24.17■■□□□ 1.46
SCN1B-206ENST00000638536 DGKIO75912 1065 aa24.17■■□□□ 1.46
SCN1B-206ENST00000638536 UBA7P41226 1012 aa24.17■■□□□ 1.46
SCN1B-206ENST00000638536 RINT1Q6NUQ1 792 aa24.17■■□□□ 1.46
SCN1B-206ENST00000638536 SLC24A5Q71RS6 500 aa24.17■■□□□ 1.46
SCN1B-206ENST00000638536 ZNF689Q96CS4 500 aaPredicted RBP24.17■■□□□ 1.46
SCN1B-206ENST00000638536 MYO7AQ13402 2215 aa24.16■■□□□ 1.46
SCN1B-206ENST00000638536 SFPQP23246 707 aaKnown RBP eCLIP24.16■■□□□ 1.46
SCN1B-206ENST00000638536 FAM189BP81408 668 aa24.16■■□□□ 1.46
SCN1B-206ENST00000638536 CATSPER4Q7RTX7 472 aa24.16■■□□□ 1.46
SCN1B-206ENST00000638536 SRGAP1Q7Z6B7 1085 aa24.16■■□□□ 1.46
SCN1B-206ENST00000638536 NPAS4Q8IUM7 802 aa24.16■■□□□ 1.46
SCN1B-206ENST00000638536 DAW1Q8N136 415 aa24.16■■□□□ 1.46
SCN1B-206ENST00000638536 INO80BQ9C086 356 aaPredicted RBP24.16■■□□□ 1.46
SCN1B-206ENST00000638536 MTUS1Q9ULD2 1270 aa24.16■■□□□ 1.46
SCN1B-206ENST00000638536 KIAA1671Q9BY89 1806 aa24.15■■□□□ 1.46
SCN1B-206ENST00000638536 BRD1O95696 1058 aa24.15■■□□□ 1.46
SCN1B-206ENST00000638536 PDIA4P13667 645 aaKnown RBP24.15■■□□□ 1.46
SCN1B-206ENST00000638536 ZSCAN20P17040 1043 aaPredicted RBP24.15■■□□□ 1.46
SCN1B-206ENST00000638536 HOXA11P31270 313 aaPredicted RBP24.15■■□□□ 1.46
SCN1B-206ENST00000638536 SLC12A3P55017 1021 aa24.15■■□□□ 1.46
SCN1B-206ENST00000638536 C1orf186Q6ZWK4 172 aa24.15■■□□□ 1.46
SCN1B-206ENST00000638536 ARNTL2Q8WYA1 636 aa24.15■■□□□ 1.46
SCN1B-206ENST00000638536 NT5C3AQ9H0P0 336 aa24.15■■□□□ 1.46
SCN1B-206ENST00000638536 C1orf112Q9NSG2 853 aa24.15■■□□□ 1.46
SCN1B-206ENST00000638536 BLOC1S4Q9NUP1 217 aa24.15■■□□□ 1.46
SCN1B-206ENST00000638536 PIN4Q9Y237 131 aaKnown RBP24.15■■□□□ 1.46
SCN1B-206ENST00000638536 PLCG1P19174 1290 aa24.14■■□□□ 1.46
SCN1B-206ENST00000638536 DNM1Q05193 864 aaKnown RBP24.14■■□□□ 1.46
SCN1B-206ENST00000638536 MBTD1Q05BQ5 628 aa24.14■■□□□ 1.46
SCN1B-206ENST00000638536 ADGRE1Q14246 886 aa24.14■■□□□ 1.46
SCN1B-206ENST00000638536 STK38Q15208 465 aa24.14■■□□□ 1.46
SCN1B-206ENST00000638536 IFNLR1Q8IU57 520 aaPredicted RBP24.14■■□□□ 1.46
SCN1B-206ENST00000638536 SYMPKQ92797 1274 aaKnown RBP24.14■■□□□ 1.46
SCN1B-206ENST00000638536 CDK5RAP3Q96JB5 506 aa24.14■■□□□ 1.46
SCN1B-206ENST00000638536 ZNF396Q96N95 335 aaPredicted RBP24.14■■□□□ 1.46
SCN1B-206ENST00000638536 C17orf80Q9BSJ5 609 aa24.14■■□□□ 1.46
SCN1B-206ENST00000638536 MORC2Q9Y6X9 1032 aaPredicted RBP24.14■■□□□ 1.46
SCN1B-206ENST00000638536 UNC80Q8N2C7 3258 aa24.14■■□□□ 1.45
SCN1B-206ENST00000638536 SSBP05455 408 aaKnown RBP eCLIP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms