RNA–Protein interactions for RNA: ENST00000637968.1

SCN1A-216, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,614 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-216ENST00000637968 GRAMD1BQ3KR37 738 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 PPP6R3Q5H9R7 873 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-216ENST00000637968 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-216ENST00000637968 UNC5CLQ8IV45 518 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 TERB1Q8NA31 727 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 PYROXD1Q8WU10 500 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 CAPSLQ8WWF8 208 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 LRRC59Q96AG4 307 aaKnown RBP6.13□□□□□ -1.43
SCN1A-216ENST00000637968 RMDN1Q96DB5 314 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 TGS1Q96RS0 853 aaKnown RBP6.13□□□□□ -1.43
SCN1A-216ENST00000637968 GPATCH1Q9BRR8 931 aaKnown RBP6.13□□□□□ -1.43
SCN1A-216ENST00000637968 ZMYND12Q9H0C1 365 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 DPH5Q9H2P9 285 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 MARCH7Q9H992 704 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 C8orf4Q9NR00 106 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 RBM12Q9NTZ6 932 aaKnown RBP6.13□□□□□ -1.43
SCN1A-216ENST00000637968 RRN3Q9NYV6 651 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 C9orf78Q9NZ63 289 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-216ENST00000637968 NKX1-2Q9UD57 310 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-216ENST00000637968 TRIM33Q9UPN9 1127 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 KIAA0556O60303 1618 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 TMEM114B3SHH9 223 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 FAM47E-STBD1D6RA91 191 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 RASGRF2O14827 1237 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 FARP2O94887 1054 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-216ENST00000637968 GNAZP19086 355 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 PTGS2P35354 604 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 CABP4P57796 275 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 ADAM17P78536 824 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 PTH1RQ03431 593 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 ZNF844Q08AG5 666 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 TBC1D9BQ66K14 1250 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 CCDC81Q6ZN84 652 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 UNC13DQ70J99 1090 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 RIC3Q7Z5B4 369 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 ADSSL1Q8N142 457 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 TSPYL6Q8N831 410 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 RHPN1Q8TCX5 695 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 SRPK1Q96SB4 655 aaKnown RBP6.13□□□□□ -1.43
SCN1A-216ENST00000637968 FMO2Q99518 471 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 KLHL4Q9C0H6 718 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 TLR7Q9NYK1 1049 aaKnown RBP6.13□□□□□ -1.43
SCN1A-216ENST00000637968 LRWD1Q9UFC0 647 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 SERPINA10Q9UK55 444 aa6.13□□□□□ -1.43
SCN1A-216ENST00000637968 MED14O60244 1454 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 FAM153BP0C7A2 387 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 PABPC4LP0CB38 370 aaKnown RBP6.12□□□□□ -1.43
SCN1A-216ENST00000637968 VARSP26640 1264 aaKnown RBP6.12□□□□□ -1.43
SCN1A-216ENST00000637968 FXR1P51114 621 aaKnown RBP eCLIP6.12□□□□□ -1.43
SCN1A-216ENST00000637968 GPC3P51654 580 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 FAM153CQ494X1 144 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 TAS2R42Q7RTR8 314 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 FAM13CQ8NE31 585 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 CASKIN2Q8WXE0 1202 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 LBHD1Q9BQE6 289 aaPredicted RBP6.12□□□□□ -1.43
SCN1A-216ENST00000637968 LRRC2Q9BYS8 371 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 IMPG2Q9BZV3 1241 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 NT5C3AQ9H0P0 336 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 ISCUQ9H1K1 167 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 MBIPQ9NS73 344 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 PARP2Q9UGN5 583 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 FAM153AQ9UHL3 310 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 SLC12A6Q9UHW9 1150 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 TBX22Q9Y458 520 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 SLC12A7Q9Y666 1083 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 KDM6BO15054 1643 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 TAF4O00268 1085 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 WASLO00401 505 aaPredicted RBP6.12□□□□□ -1.43
SCN1A-216ENST00000637968 ENTPD5O75356 428 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 TRMUO75648 421 aaKnown RBP6.12□□□□□ -1.43
SCN1A-216ENST00000637968 GAS8O95995 478 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 ATP6V1B1P15313 513 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 PLCG2P16885 1265 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 PRKACAP17612 351 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 PTPN4P29074 926 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 KRT20P35900 424 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 GSSP48637 474 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 PTK2BQ14289 1009 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 NEPROQ6NW34 567 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 KLHL35Q6PF15 583 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 PIGWQ7Z7B1 504 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 SAMD14Q8IZD0 417 aaPredicted RBP6.12□□□□□ -1.43
SCN1A-216ENST00000637968 TTC8Q8TAM2 541 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 PLEKHO2Q8TD55 490 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 RPGRQ92834 1020 aaKnown RBP6.12□□□□□ -1.43
SCN1A-216ENST00000637968 BORCS5Q969J3 196 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 MAELQ96JY0 434 aaKnown RBP6.12□□□□□ -1.43
SCN1A-216ENST00000637968 TRIM47Q96LD4 638 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 SNX25Q9H3E2 840 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 CLK4Q9HAZ1 481 aaKnown RBP6.12□□□□□ -1.43
SCN1A-216ENST00000637968 CD209Q9NNX6 404 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 GDF3Q9NR23 364 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 ZMYND8Q9ULU4 1186 aaPredicted RBP6.12□□□□□ -1.43
SCN1A-216ENST00000637968 NCKAP5LQ9HCH0 1330 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 A0A0U1RQJ8 604 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 GSTTP1A0A1W2PQM5 241 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 WDR91A4D1P6 747 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 BTBD19C9JJ37 291 aa6.12□□□□□ -1.43
SCN1A-216ENST00000637968 SEC24DO94855 1032 aaPredicted RBP6.12□□□□□ -1.43
SCN1A-216ENST00000637968 PSMG1O95456 288 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms