RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 SRRM1Q8IYB3 904 aaKnown RBP2.36□□□□□ -2.03
SCN1A-215ENST00000637285 FAM98AQ8NCA5 519 aaKnown RBP2.36□□□□□ -2.03
SCN1A-215ENST00000637285 ZNF384Q8TF68 577 aa2.36□□□□□ -2.03
SCN1A-215ENST00000637285 WASF1Q92558 559 aa2.36□□□□□ -2.03
SCN1A-215ENST00000637285 OSBP2Q969R2 916 aa2.36□□□□□ -2.03
SCN1A-215ENST00000637285 KCNH6Q9H252 994 aa2.36□□□□□ -2.03
SCN1A-215ENST00000637285 SYBUQ9NX95 663 aa2.36□□□□□ -2.03
SCN1A-215ENST00000637285 COL3A1P02461 1466 aaPredicted RBP2.35□□□□□ -2.03
SCN1A-215ENST00000637285 COL11A2P13942 1736 aaPredicted RBP2.35□□□□□ -2.03
SCN1A-215ENST00000637285 SCAMP3O14828 347 aaKnown RBP2.35□□□□□ -2.03
SCN1A-215ENST00000637285 FOXP2O15409 715 aa2.35□□□□□ -2.03
SCN1A-215ENST00000637285 NDUFA10O95299 355 aa2.35□□□□□ -2.03
SCN1A-215ENST00000637285 HKR1P10072 659 aa2.35□□□□□ -2.03
SCN1A-215ENST00000637285 FGFR1P11362 822 aa2.35□□□□□ -2.03
SCN1A-215ENST00000637285 HOXB6P17509 224 aaKnown RBP2.35□□□□□ -2.03
SCN1A-215ENST00000637285 DNM2P50570 870 aa2.35□□□□□ -2.03
SCN1A-215ENST00000637285 NPEPPSP55786 919 aa2.35□□□□□ -2.03
SCN1A-215ENST00000637285 ANTXR2P58335 489 aa2.35□□□□□ -2.03
SCN1A-215ENST00000637285 GAGE13Q4V321 117 aa2.35□□□□□ -2.03
SCN1A-215ENST00000637285 DCAF17Q5H9S7 520 aaPredicted RBP2.35□□□□□ -2.03
SCN1A-215ENST00000637285 C16orf59Q7L2K0 433 aa2.35□□□□□ -2.03
SCN1A-215ENST00000637285 DPH6Q7L8W6 267 aa2.35□□□□□ -2.03
SCN1A-215ENST00000637285 METTL16Q86W50 562 aaKnown RBP2.35□□□□□ -2.03
SCN1A-215ENST00000637285 PLA2G15Q8NCC3 412 aa2.35□□□□□ -2.03
SCN1A-215ENST00000637285 PCDH19Q8TAB3 1148 aa2.35□□□□□ -2.03
SCN1A-215ENST00000637285 ZNF778Q96MU6 729 aa2.35□□□□□ -2.03
SCN1A-215ENST00000637285 CPPED1Q9BRF8 314 aaPredicted RBP2.35□□□□□ -2.03
SCN1A-215ENST00000637285 SLC46A2Q9BY10 475 aa2.35□□□□□ -2.03
SCN1A-215ENST00000637285 GZF1Q9H116 711 aaPredicted RBP2.35□□□□□ -2.03
SCN1A-215ENST00000637285 EPC1Q9H2F5 836 aa2.35□□□□□ -2.03
SCN1A-215ENST00000637285 SMURF1Q9HCE7 757 aa2.35□□□□□ -2.03
SCN1A-215ENST00000637285 KIAA1586Q9HCI6 787 aa2.35□□□□□ -2.03
SCN1A-215ENST00000637285 TRPM5Q9NZQ8 1165 aa2.35□□□□□ -2.03
SCN1A-215ENST00000637285 TLK1Q9UKI8 766 aa2.35□□□□□ -2.03
SCN1A-215ENST00000637285 PCDHA8Q9Y5H6 950 aa2.35□□□□□ -2.03
SCN1A-215ENST00000637285 RASSF10A6NK89 507 aa2.34□□□□□ -2.03
SCN1A-215ENST00000637285 TMEM200CA6NKL6 621 aa2.34□□□□□ -2.03
SCN1A-215ENST00000637285 ZNF561-AS1K7EIQ3 104 aa2.34□□□□□ -2.03
SCN1A-215ENST00000637285 RNASET2O00584 256 aaKnown RBP2.34□□□□□ -2.03
SCN1A-215ENST00000637285 RBMXL2O75526 392 aaKnown RBP2.34□□□□□ -2.03
SCN1A-215ENST00000637285 NCR1O76036 304 aa2.34□□□□□ -2.03
SCN1A-215ENST00000637285 IGLV2-14P01704 120 aa2.34□□□□□ -2.03
SCN1A-215ENST00000637285 JUNP05412 331 aaKnown RBP2.34□□□□□ -2.03
SCN1A-215ENST00000637285 SSBP05455 408 aaKnown RBP eCLIP2.34□□□□□ -2.03
SCN1A-215ENST00000637285 APOBEC3AP31941 199 aaPredicted RBP2.34□□□□□ -2.03
SCN1A-215ENST00000637285 GUCY1A3Q02108 690 aa2.34□□□□□ -2.03
SCN1A-215ENST00000637285 SPIDRQ14159 915 aa2.34□□□□□ -2.03
SCN1A-215ENST00000637285 TMEM132BQ14DG7 1078 aa2.34□□□□□ -2.03
SCN1A-215ENST00000637285 TM4SF20Q53R12 229 aa2.34□□□□□ -2.03
SCN1A-215ENST00000637285 YOD1Q5VVQ6 348 aaPredicted RBP2.34□□□□□ -2.03
SCN1A-215ENST00000637285 ARHGEF25Q86VW2 580 aa2.34□□□□□ -2.03
SCN1A-215ENST00000637285 NT5DC4Q86YG4 428 aa2.34□□□□□ -2.03
SCN1A-215ENST00000637285 ARHGEF19Q8IW93 802 aa2.34□□□□□ -2.03
SCN1A-215ENST00000637285 CISD2Q8N5K1 135 aaKnown RBP2.34□□□□□ -2.03
SCN1A-215ENST00000637285 Q8N9P0 234 aaPredicted RBP2.34□□□□□ -2.03
SCN1A-215ENST00000637285 CAGE1Q8TC20 777 aa2.34□□□□□ -2.03
SCN1A-215ENST00000637285 LINC00476Q8WZB0 136 aa2.34□□□□□ -2.03
SCN1A-215ENST00000637285 AKIP1Q9NQ31 210 aa2.34□□□□□ -2.03
SCN1A-215ENST00000637285 ARHGEF4Q9NR80 690 aa2.34□□□□□ -2.03
SCN1A-215ENST00000637285 INPP5FQ9Y2H2 1132 aa2.34□□□□□ -2.03
SCN1A-215ENST00000637285 ASB1Q9Y576 335 aa2.34□□□□□ -2.03
SCN1A-215ENST00000637285 CCDC66A2RUB6 948 aa2.33□□□□□ -2.04
SCN1A-215ENST00000637285 UNC119BA6NIH7 251 aa2.33□□□□□ -2.04
SCN1A-215ENST00000637285 GOLGA6L22H0YM25 854 aa2.33□□□□□ -2.04
SCN1A-215ENST00000637285 AQP7O14520 342 aa2.33□□□□□ -2.04
SCN1A-215ENST00000637285 WNT9AO14904 365 aa2.33□□□□□ -2.04
SCN1A-215ENST00000637285 GSTA4O15217 222 aa2.33□□□□□ -2.04
SCN1A-215ENST00000637285 ZFPL1O95159 310 aa2.33□□□□□ -2.04
SCN1A-215ENST00000637285 MATN4O95460 622 aa2.33□□□□□ -2.04
SCN1A-215ENST00000637285 SRSF4Q08170 494 aaKnown RBP2.33□□□□□ -2.04
SCN1A-215ENST00000637285 DGKDQ16760 1214 aa2.33□□□□□ -2.04
SCN1A-215ENST00000637285 FAM47CQ5HY64 1035 aa2.33□□□□□ -2.04
SCN1A-215ENST00000637285 APBB1IPQ7Z5R6 666 aaPredicted RBP2.33□□□□□ -2.04
SCN1A-215ENST00000637285 CLEC14AQ86T13 490 aa2.33□□□□□ -2.04
SCN1A-215ENST00000637285 CMTM4Q8IZR5 234 aa2.33□□□□□ -2.04
SCN1A-215ENST00000637285 LILRA3Q8N6C8 439 aaPredicted RBP2.33□□□□□ -2.04
SCN1A-215ENST00000637285 OR5AN1Q8NGI8 311 aa2.33□□□□□ -2.04
SCN1A-215ENST00000637285 SLC7A14Q8TBB6 771 aa2.33□□□□□ -2.04
SCN1A-215ENST00000637285 SGSM3Q96HU1 749 aa2.33□□□□□ -2.04
SCN1A-215ENST00000637285 COQ10AQ96MF6 247 aa2.33□□□□□ -2.04
SCN1A-215ENST00000637285 WDR92Q96MX6 357 aa2.33□□□□□ -2.04
SCN1A-215ENST00000637285 DUSP26Q9BV47 211 aa2.33□□□□□ -2.04
SCN1A-215ENST00000637285 ACBD3Q9H3P7 528 aa2.33□□□□□ -2.04
SCN1A-215ENST00000637285 ST7Q9NRC1 585 aa2.33□□□□□ -2.04
SCN1A-215ENST00000637285 KCNH7Q9NS40 1196 aa2.33□□□□□ -2.04
SCN1A-215ENST00000637285 PRKAG3Q9UGI9 489 aa2.33□□□□□ -2.04
SCN1A-215ENST00000637285 DNAI1Q9UI46 699 aa2.33□□□□□ -2.04
SCN1A-215ENST00000637285 TRAV20A0A0B4J274 112 aa2.32□□□□□ -2.04
SCN1A-215ENST00000637285 PIPSLA2A3N6 862 aa2.32□□□□□ -2.04
SCN1A-215ENST00000637285 WDR91A4D1P6 747 aa2.32□□□□□ -2.04
SCN1A-215ENST00000637285 IQCA1LA6NCM1 817 aa2.32□□□□□ -2.04
SCN1A-215ENST00000637285 DAPK3O43293 454 aa2.32□□□□□ -2.04
SCN1A-215ENST00000637285 MAFO75444 373 aaPredicted RBP2.32□□□□□ -2.04
SCN1A-215ENST00000637285 RASGRP1O95267 797 aa2.32□□□□□ -2.04
SCN1A-215ENST00000637285 HNRNPLP14866 589 aaKnown RBP eCLIP2.32□□□□□ -2.043e-6■■□□□ 12.6
SCN1A-215ENST00000637285 ATF4P18848 351 aaPredicted RBP2.32□□□□□ -2.04
SCN1A-215ENST00000637285 ETFBP38117 255 aa2.32□□□□□ -2.04
SCN1A-215ENST00000637285 GUCY1B3Q02153 619 aa2.32□□□□□ -2.04
SCN1A-215ENST00000637285 ALDH6A1Q02252 535 aaKnown RBP2.32□□□□□ -2.04
SCN1A-215ENST00000637285 IQSEC1Q6DN90 963 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms