RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 MSH2P43246 934 aa16.82■□□□□ 0.28
CACNA1A-235ENST00000637004 JAM2P57087 298 aa16.82■□□□□ 0.28
CACNA1A-235ENST00000637004 BLMHQ13867 455 aa16.82■□□□□ 0.28
CACNA1A-235ENST00000637004 TRAPPC3LQ5T215 181 aa16.82■□□□□ 0.28
CACNA1A-235ENST00000637004 MFSD5Q6N075 450 aa16.82■□□□□ 0.28
CACNA1A-235ENST00000637004 USP17L2Q6R6M4 530 aa16.82■□□□□ 0.28
CACNA1A-235ENST00000637004 SLC35G2Q8TBE7 412 aa16.82■□□□□ 0.28
CACNA1A-235ENST00000637004 CTNNBL1Q8WYA6 563 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-235ENST00000637004 RUNDC3BQ96NL0 473 aa16.82■□□□□ 0.28
CACNA1A-235ENST00000637004 SEMA4AQ9H3S1 761 aa16.82■□□□□ 0.28
CACNA1A-235ENST00000637004 PPP1R9AQ9ULJ8 1098 aa16.82■□□□□ 0.28
CACNA1A-235ENST00000637004 ARL2BPQ9Y2Y0 163 aa16.82■□□□□ 0.28
CACNA1A-235ENST00000637004 CAMTA2O94983 1202 aa16.81■□□□□ 0.28
CACNA1A-235ENST00000637004 PLA2G4BP0C869 781 aa16.81■□□□□ 0.28
CACNA1A-235ENST00000637004 RFC4P35249 363 aa16.81■□□□□ 0.28
CACNA1A-235ENST00000637004 PLS1Q14651 629 aa16.81■□□□□ 0.28
CACNA1A-235ENST00000637004 GPBP1Q86WP2 473 aa16.81■□□□□ 0.28
CACNA1A-235ENST00000637004 TBC1D16Q8TBP0 767 aa16.81■□□□□ 0.28
CACNA1A-235ENST00000637004 ROPN1BQ9BZX4 212 aaPredicted RBP16.81■□□□□ 0.28
CACNA1A-235ENST00000637004 TAOK3Q9H2K8 898 aa16.81■□□□□ 0.28
CACNA1A-235ENST00000637004 ROPN1Q9HAT0 212 aaPredicted RBP16.81■□□□□ 0.28
CACNA1A-235ENST00000637004 METTL14Q9HCE5 456 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-235ENST00000637004 TRAF3IP3Q9Y228 551 aa16.81■□□□□ 0.28
CACNA1A-235ENST00000637004 KRT18P05783 430 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-235ENST00000637004 KRT13P13646 458 aa16.81■□□□□ 0.28
CACNA1A-235ENST00000637004 CHRNA3P32297 505 aa16.81■□□□□ 0.28
CACNA1A-235ENST00000637004 EPHA7Q15375 998 aa16.81■□□□□ 0.28
CACNA1A-235ENST00000637004 ANKRD20A2Q5SQ80 823 aa16.81■□□□□ 0.28
CACNA1A-235ENST00000637004 ANKRD20A1Q5TYW2 823 aa16.81■□□□□ 0.28
CACNA1A-235ENST00000637004 DCAF12L1Q5VU92 463 aa16.81■□□□□ 0.28
CACNA1A-235ENST00000637004 ANKRD20A3Q5VUR7 823 aa16.81■□□□□ 0.28
CACNA1A-235ENST00000637004 ADAT2Q7Z6V5 191 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-235ENST00000637004 EPS8L3Q8TE67 593 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-235ENST00000637004 MXD3Q9BW11 206 aa16.81■□□□□ 0.28
CACNA1A-235ENST00000637004 TRIM7Q9C029 511 aa16.81■□□□□ 0.28
CACNA1A-235ENST00000637004 OSGEPQ9NPF4 335 aa16.81■□□□□ 0.28
CACNA1A-235ENST00000637004 PCDHA12Q9UN75 941 aa16.81■□□□□ 0.28
CACNA1A-235ENST00000637004 SCN7AQ01118 1682 aa16.81■□□□□ 0.28
CACNA1A-235ENST00000637004 KRT16P08779 473 aa16.8■□□□□ 0.28
CACNA1A-235ENST00000637004 RASA1P20936 1047 aa16.8■□□□□ 0.28
CACNA1A-235ENST00000637004 PEX19P40855 299 aa16.8■□□□□ 0.28
CACNA1A-235ENST00000637004 STAT1P42224 750 aa16.8■□□□□ 0.28
CACNA1A-235ENST00000637004 PPATQ06203 517 aa16.8■□□□□ 0.28
CACNA1A-235ENST00000637004 MKRN4PQ13434 485 aaPredicted RBP16.8■□□□□ 0.28
CACNA1A-235ENST00000637004 AUHQ13825 339 aaKnown RBP16.8■□□□□ 0.28
CACNA1A-235ENST00000637004 RXFP1Q9HBX9 757 aa16.8■□□□□ 0.28
CACNA1A-235ENST00000637004 GRHL1Q9NZI5 618 aa16.8■□□□□ 0.28
CACNA1A-235ENST00000637004 DDX25Q9UHL0 483 aaKnown RBP16.8■□□□□ 0.28
CACNA1A-235ENST00000637004 PITPNM2Q9BZ72 1349 aa16.8■□□□□ 0.28
CACNA1A-235ENST00000637004 RIPK2O43353 540 aa16.8■□□□□ 0.28
CACNA1A-235ENST00000637004 RARGP13631 454 aa16.8■□□□□ 0.28
CACNA1A-235ENST00000637004 SLCO1A2P46721 670 aa16.8■□□□□ 0.28
CACNA1A-235ENST00000637004 DCAF17Q5H9S7 520 aaPredicted RBP16.8■□□□□ 0.28
CACNA1A-235ENST00000637004 ERICH1Q86X53 443 aa16.8■□□□□ 0.28
CACNA1A-235ENST00000637004 SLC44A5Q8NCS7 719 aa16.8■□□□□ 0.28
CACNA1A-235ENST00000637004 PRCCQ92733 491 aaPredicted RBP16.8■□□□□ 0.28
CACNA1A-235ENST00000637004 ERVK-5Q9HDB9 667 aa16.8■□□□□ 0.28
CACNA1A-235ENST00000637004 FGFR1OP2Q9NVK5 253 aa16.8■□□□□ 0.28
CACNA1A-235ENST00000637004 STK38LQ9Y2H1 464 aa16.8■□□□□ 0.28
CACNA1A-235ENST00000637004 TCP11X1B4DZS4 312 aa16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 SLC26A4O43511 780 aa16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 EDIL3O43854 480 aa16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 PHF2O75151 1096 aa16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 RPS6KA4O75676 772 aa16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 WFS1O76024 890 aa16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 GJB6O95452 261 aa16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 SKIV2L2P42285 1042 aaKnown RBP16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 TNNI2P48788 182 aa16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 SF3B3Q15393 1217 aaKnown RBP16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 SPATA21Q7Z572 469 aa16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 TEX9Q8N6V9 391 aa16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 ZHX3Q9H4I2 956 aa16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 KIAA1024Q9UPX6 916 aa16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 SYNGAP1Q96PV0 1343 aa16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 E9PMD0 336 aa16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 CALUO43852 315 aaPredicted RBP16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 CYP11B2P19099 503 aa16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 ATP5DP30049 168 aa16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 COPB2P35606 906 aa16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 KNOP1Q1ED39 458 aaKnown RBP16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 TCERG1LQ5VWI1 586 aa16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 AP1ARQ63HQ0 302 aa16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 ASRGL1Q7L266 308 aa16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 SPICE1Q8N0Z3 855 aa16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 KIF2BQ8N4N8 673 aa16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 SLC30A5Q8TAD4 765 aa16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 RAB3IPQ96QF0 476 aaPredicted RBP16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 RIOX1Q9H6W3 641 aa16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 GCNT4Q9P109 453 aa16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 GGT7Q9UJ14 662 aa16.79■□□□□ 0.28
CACNA1A-235ENST00000637004 GTPBP10A4D1E9 387 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-235ENST00000637004 RPL13P26373 211 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-235ENST00000637004 NUGGCQ68CJ6 796 aa16.78■□□□□ 0.28
CACNA1A-235ENST00000637004 HAS1Q92839 578 aa16.78■□□□□ 0.28
CACNA1A-235ENST00000637004 EYA3Q99504 573 aa16.78■□□□□ 0.28
CACNA1A-235ENST00000637004 SIX2Q9NPC8 291 aa16.78■□□□□ 0.28
CACNA1A-235ENST00000637004 ADAM22Q9P0K1 906 aa16.78■□□□□ 0.28
CACNA1A-235ENST00000637004 PCYOX1Q9UHG3 505 aa16.78■□□□□ 0.28
CACNA1A-235ENST00000637004 BAG3O95817 575 aa16.78■□□□□ 0.28
CACNA1A-235ENST00000637004 PTGIRP43119 386 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms