RNA–Protein interactions for RNA: ENST00000636616.1

EFHC1-223, Transcript of EF-hand domain containing 1, human

TSL 5

Gene EFHC1, Length 1,636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFHC1-223	ENST00000636616	SAPCD2	Q86UD0	394 aa		5.91	□□□□□ -1.46
EFHC1-223	ENST00000636616	MTDH	Q86UE4	582 aa	Known RBP	5.91	□□□□□ -1.46
EFHC1-223	ENST00000636616	FIBCD1	Q8N539	461 aa		5.91	□□□□□ -1.46
EFHC1-223	ENST00000636616	CHST14	Q8NCH0	376 aa		5.91	□□□□□ -1.46
EFHC1-223	ENST00000636616	SERINC2	Q96SA4	455 aa		5.91	□□□□□ -1.46
EFHC1-223	ENST00000636616	GTPBP4	Q9BZE4	634 aa	Known RBP	5.91	□□□□□ -1.46
EFHC1-223	ENST00000636616	NOL6	Q9H6R4	1146 aa	Known RBP	5.91	□□□□□ -1.46
EFHC1-223	ENST00000636616	FAM204A	Q9H8W3	233 aa		5.91	□□□□□ -1.46
EFHC1-223	ENST00000636616	CABP5	Q9NP86	173 aa		5.91	□□□□□ -1.46
EFHC1-223	ENST00000636616	LMCD1	Q9NZU5	365 aa		5.91	□□□□□ -1.46
EFHC1-223	ENST00000636616	SLC45A1	Q9Y2W3	748 aa		5.91	□□□□□ -1.46
EFHC1-223	ENST00000636616	MYOM2	P54296	1465 aa		5.91	□□□□□ -1.46
EFHC1-223	ENST00000636616	NRXN1	Q9ULB1	1477 aa		5.91	□□□□□ -1.46
EFHC1-223	ENST00000636616	hCG_1642624	A0A1W2PR95	340 aa		5.9	□□□□□ -1.46
EFHC1-223	ENST00000636616	RASA4B	C9J798	803 aa		5.9	□□□□□ -1.46
EFHC1-223	ENST00000636616	RASA4	O43374	803 aa		5.9	□□□□□ -1.46
EFHC1-223	ENST00000636616	ANP32C	O43423	234 aa		5.9	□□□□□ -1.46
EFHC1-223	ENST00000636616	GSN	P06396	782 aa		5.9	□□□□□ -1.46
EFHC1-223	ENST00000636616	LTK	P29376	864 aa		5.9	□□□□□ -1.46
EFHC1-223	ENST00000636616	ECI1	P42126	302 aa		5.9	□□□□□ -1.46
EFHC1-223	ENST00000636616	RXRG	P48443	463 aa		5.9	□□□□□ -1.46
EFHC1-223	ENST00000636616	FXR1	P51114	621 aa	Known RBP eCLIP	5.9	□□□□□ -1.46
EFHC1-223	ENST00000636616	ACAP2	Q15057	778 aa		5.9	□□□□□ -1.46
EFHC1-223	ENST00000636616	CC2D1A	Q6P1N0	951 aa	Predicted RBP	5.9	□□□□□ -1.46
EFHC1-223	ENST00000636616	LILRA6	Q6PI73	481 aa		5.9	□□□□□ -1.46
EFHC1-223	ENST00000636616	C1orf122	Q6ZSJ8	110 aa		5.9	□□□□□ -1.46
EFHC1-223	ENST00000636616	SYDE1	Q6ZW31	735 aa	Predicted RBP	5.9	□□□□□ -1.46
EFHC1-223	ENST00000636616	RASSF3	Q86WH2	238 aa		5.9	□□□□□ -1.46
EFHC1-223	ENST00000636616	KREMEN2	Q8NCW0	462 aa		5.9	□□□□□ -1.46
EFHC1-223	ENST00000636616	PPP1R35	Q8TAP8	253 aa		5.9	□□□□□ -1.46
EFHC1-223	ENST00000636616	JADE3	Q92613	823 aa		5.9	□□□□□ -1.46
EFHC1-223	ENST00000636616	HPS3	Q969F9	1004 aa		5.9	□□□□□ -1.46
EFHC1-223	ENST00000636616	ISCA1	Q9BUE6	129 aa		5.9	□□□□□ -1.46
EFHC1-223	ENST00000636616	APOL5	Q9BWW9	433 aa		5.9	□□□□□ -1.46
EFHC1-223	ENST00000636616	CARS2	Q9HA77	564 aa	Known RBP	5.9	□□□□□ -1.46
EFHC1-223	ENST00000636616	TOPORS	Q9NS56	1045 aa	Predicted RBP	5.9	□□□□□ -1.46
EFHC1-223	ENST00000636616	PCDHA11	Q9Y5I1	949 aa		5.9	□□□□□ -1.46
EFHC1-223	ENST00000636616	NEXMIF	Q5QGS0	1516 aa		5.9	□□□□□ -1.47
EFHC1-223	ENST00000636616	RIMS2	Q9UQ26	1411 aa		5.9	□□□□□ -1.47
EFHC1-223	ENST00000636616	PLEKHG1	Q9ULL1	1385 aa		5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616		A0A1B0GVC2	190 aa		5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616		H0Y8X5	98 aa		5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	FIBP	O43427	364 aa		5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	HSD3B1	P14060	373 aa		5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	ZP2	Q05996	745 aa		5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	EGR3	Q06889	387 aa		5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	PPP2R5D	Q14738	602 aa		5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	CLUL1	Q15846	466 aa		5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	PDCD2	Q16342	344 aa	Predicted RBP	5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	TLDC1	Q6P9B6	456 aa		5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	CRTC3	Q6UUV7	619 aa		5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	RSRC2	Q7L4I2	434 aa	Known RBP	5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	PTRH1	Q86Y79	214 aa	Known RBP	5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	ZC3H7A	Q8IWR0	971 aa	Known RBP	5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	LINC00116	Q8NCU8	138 aa		5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	CXorf38	Q8TB03	319 aa		5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	LMBR1	Q8WVP7	490 aa		5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	GCC1	Q96CN9	775 aa		5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	FMNL2	Q96PY5	1086 aa		5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	CELF4	Q9BZC1	486 aa	Known RBP	5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	BHMT2	Q9H2M3	363 aa		5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	OXSM	Q9NWU1	459 aa		5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	RRN3	Q9NYV6	651 aa		5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	ZNF652	Q9Y2D9	606 aa		5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	SF3B6	Q9Y3B4	125 aa	Known RBP	5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	SCAF11	Q99590	1463 aa	Known RBP	5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	IFT172	Q9UG01	1749 aa		5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	PIK3R4	Q99570	1358 aa		5.89	□□□□□ -1.47
EFHC1-223	ENST00000636616	PTPDC1	A2A3K4	754 aa		5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616		A6NCN8	305 aa		5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	LRRC10B	A6NIK2	292 aa		5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616		M0R3H8	397 aa		5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	CP	P00450	1065 aa		5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	SYP	P08247	313 aa		5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	VDR	P11473	427 aa		5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	NAT1	P18440	290 aa		5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	FUT4	P22083	530 aa		5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	BMP8B	P34820	402 aa		5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	PCBP3	P57721	371 aa	Known RBP	5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	KIAA0753	Q2KHM9	967 aa		5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	C1QTNF12	Q5T7M4	302 aa		5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	RNF111	Q6ZNA4	994 aa		5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	TP53INP2	Q8IXH6	220 aa		5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	MYCT1	Q8N699	235 aa		5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	PCDH19	Q8TAB3	1148 aa		5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	CDK5RAP3	Q96JB5	506 aa		5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	PPM1M	Q96MI6	270 aa		5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	RIPOR3	Q96MK2	946 aa		5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	ZDHHC15	Q96MV8	337 aa		5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	FOXP3	Q9BZS1	431 aa		5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	OSBPL5	Q9H0X9	879 aa	Predicted RBP	5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	RSPH9	Q9H1X1	276 aa	Predicted RBP	5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	C14orf93	Q9H972	538 aa	Known RBP	5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	AGO4	Q9HCK5	861 aa	Known RBP	5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	CCM2L	Q9NUG4	571 aa	Predicted RBP	5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	TCFL5	Q9UL49	500 aa		5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	LRRFIP2	Q9Y608	721 aa	Known RBP	5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	PPL	O60437	1756 aa		5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	SSU72P8	A0A1W2PR75	194 aa		5.88	□□□□□ -1.47
EFHC1-223	ENST00000636616	HIP1R	O75146	1068 aa		5.88	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms