RNA–Protein interactions for RNA: ENST00000636070.1

AMT-229, Transcript of aminomethyltransferase, human

TSL 2

Gene AMT, Length 1,827 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AMT-229	ENST00000636070	ADAM9	Q13443	819 aa		18.19	■□□□□ 0.5
AMT-229	ENST00000636070	FILIP1	Q7Z7B0	1213 aa		18.19	■□□□□ 0.5
AMT-229	ENST00000636070	TMEM161B	Q8NDZ6	487 aa		18.19	■□□□□ 0.5
AMT-229	ENST00000636070	DEPTOR	Q8TB45	409 aa		18.19	■□□□□ 0.5
AMT-229	ENST00000636070	PSPC1	Q8WXF1	523 aa	Known RBP	18.19	■□□□□ 0.5
AMT-229	ENST00000636070	SUGCT	Q9HAC7	445 aa		18.19	■□□□□ 0.5
AMT-229	ENST00000636070	ASAP2	O43150	1006 aa		18.18	■□□□□ 0.5
AMT-229	ENST00000636070	F2	P00734	622 aa		18.18	■□□□□ 0.5
AMT-229	ENST00000636070	PRKAR2A	P13861	404 aa	Known RBP	18.18	■□□□□ 0.5
AMT-229	ENST00000636070	TMOD1	P28289	359 aa		18.18	■□□□□ 0.5
AMT-229	ENST00000636070	HOXD13	P35453	343 aa		18.18	■□□□□ 0.5
AMT-229	ENST00000636070	SOX10	P56693	466 aa		18.18	■□□□□ 0.5
AMT-229	ENST00000636070	CAP1	Q01518	475 aa		18.18	■□□□□ 0.5
AMT-229	ENST00000636070	NFIL3	Q16649	462 aa		18.18	■□□□□ 0.5
AMT-229	ENST00000636070	MYL3	P08590	195 aa		18.17	■□□□□ 0.5
AMT-229	ENST00000636070	C6orf222	P0C671	652 aa	Predicted RBP	18.17	■□□□□ 0.5
AMT-229	ENST00000636070	ELN	P15502	786 aa		18.17	■□□□□ 0.5
AMT-229	ENST00000636070	PPFIA1	Q13136	1202 aa		18.17	■□□□□ 0.5
AMT-229	ENST00000636070	MYBPC2	Q14324	1141 aa		18.17	■□□□□ 0.5
AMT-229	ENST00000636070	KRT31	Q15323	416 aa		18.17	■□□□□ 0.5
AMT-229	ENST00000636070	EFCAB12	Q6NXP0	572 aa		18.17	■□□□□ 0.5
AMT-229	ENST00000636070	PHLPP2	Q6ZVD8	1323 aa		18.17	■□□□□ 0.5
AMT-229	ENST00000636070	IRF2BP1	Q8IU81	584 aa		18.17	■□□□□ 0.5
AMT-229	ENST00000636070	SLAIN1	Q8ND83	568 aa		18.17	■□□□□ 0.5
AMT-229	ENST00000636070	KCNN1	Q92952	543 aa		18.17	■□□□□ 0.5
AMT-229	ENST00000636070	TBX20	Q9UMR3	447 aa		18.17	■□□□□ 0.5
AMT-229	ENST00000636070	WDR81	Q562E7	1941 aa		18.17	■□□□□ 0.5
AMT-229	ENST00000636070	NRCAM	Q92823	1304 aa		18.16	■□□□□ 0.5
AMT-229	ENST00000636070	DENND3	A2RUS2	1198 aa		18.16	■□□□□ 0.5
AMT-229	ENST00000636070	PTMA	P06454	111 aa	Known RBP	18.16	■□□□□ 0.5
AMT-229	ENST00000636070	GLRA2	P23416	452 aa		18.16	■□□□□ 0.5
AMT-229	ENST00000636070	NR2F2	P24468	414 aa		18.16	■□□□□ 0.5
AMT-229	ENST00000636070	KLRC1	P26715	233 aa		18.16	■□□□□ 0.5
AMT-229	ENST00000636070	MTIF2	P46199	727 aa	Known RBP	18.16	■□□□□ 0.5
AMT-229	ENST00000636070	IGBP1	P78318	339 aa		18.16	■□□□□ 0.5
AMT-229	ENST00000636070	NKX3-2	P78367	333 aa		18.16	■□□□□ 0.5
AMT-229	ENST00000636070	KCNA1	Q09470	495 aa		18.16	■□□□□ 0.5
AMT-229	ENST00000636070	TFDP1	Q14186	410 aa		18.16	■□□□□ 0.5
AMT-229	ENST00000636070	GNAS	Q5JWF2	1037 aa		18.16	■□□□□ 0.5
AMT-229	ENST00000636070	LRRC55	Q6ZSA7	311 aa		18.16	■□□□□ 0.5
AMT-229	ENST00000636070	ZC3H3	Q8IXZ2	948 aa	Known RBP	18.16	■□□□□ 0.5
AMT-229	ENST00000636070	METTL13	Q8N6R0	699 aa		18.16	■□□□□ 0.5
AMT-229	ENST00000636070	PRPF31	Q8WWY3	499 aa	Known RBP	18.16	■□□□□ 0.5
AMT-229	ENST00000636070	BSND	Q8WZ55	320 aa		18.16	■□□□□ 0.5
AMT-229	ENST00000636070	LENG1	Q96BZ8	264 aa	Predicted RBP	18.16	■□□□□ 0.5
AMT-229	ENST00000636070	CNOT6L	Q96LI5	555 aa	Known RBP	18.16	■□□□□ 0.5
AMT-229	ENST00000636070	UPF3A	Q9H1J1	476 aa	Known RBP	18.16	■□□□□ 0.5
AMT-229	ENST00000636070	SUCLA2	Q9P2R7	463 aa	Predicted RBP	18.16	■□□□□ 0.5
AMT-229	ENST00000636070	CASP8AP2	Q9UKL3	1982 aa		18.16	■□□□□ 0.5
AMT-229	ENST00000636070		A0A1B0GTH6	734 aa		18.16	■□□□□ 0.5
AMT-229	ENST00000636070	LRRIQ4	A6NIV6	560 aa		18.16	■□□□□ 0.5
AMT-229	ENST00000636070	N4BP3	O15049	544 aa		18.16	■□□□□ 0.5
AMT-229	ENST00000636070	TGFB1I1	O43294	461 aa		18.16	■□□□□ 0.5
AMT-229	ENST00000636070	NR3C1	P04150	777 aa		18.16	■□□□□ 0.5
AMT-229	ENST00000636070	EFNA5	P52803	228 aa		18.16	■□□□□ 0.5
AMT-229	ENST00000636070	STRN3	Q13033	797 aa		18.16	■□□□□ 0.5
AMT-229	ENST00000636070	MFSD10	Q14728	455 aa		18.16	■□□□□ 0.5
AMT-229	ENST00000636070	GRIK4	Q16099	956 aa		18.16	■□□□□ 0.5
AMT-229	ENST00000636070	TRIM44	Q96DX7	344 aa	Predicted RBP	18.16	■□□□□ 0.5
AMT-229	ENST00000636070	NAP1L5	Q96NT1	182 aa	Predicted RBP	18.16	■□□□□ 0.5
AMT-229	ENST00000636070	TUBGCP2	Q9BSJ2	902 aa		18.16	■□□□□ 0.5
AMT-229	ENST00000636070	ARHGAP28	Q9P2N2	729 aa		18.16	■□□□□ 0.5
AMT-229	ENST00000636070	MSC	O60682	206 aa		18.15	■□□□□ 0.5
AMT-229	ENST00000636070	C22orf31	O95567	290 aa		18.15	■□□□□ 0.5
AMT-229	ENST00000636070	COPB1	P53618	953 aa	Known RBP	18.15	■□□□□ 0.5
AMT-229	ENST00000636070	C1QTNF8	P60827	252 aa		18.15	■□□□□ 0.5
AMT-229	ENST00000636070	TRIM32	Q13049	653 aa		18.15	■□□□□ 0.5
AMT-229	ENST00000636070	NR1I3	Q14994	352 aa		18.15	■□□□□ 0.5
AMT-229	ENST00000636070	KIAA0753	Q2KHM9	967 aa		18.15	■□□□□ 0.5
AMT-229	ENST00000636070	CCDC40	Q4G0X9	1142 aa		18.15	■□□□□ 0.5
AMT-229	ENST00000636070	MAP3K21	Q5TCX8	1036 aa		18.15	■□□□□ 0.5
AMT-229	ENST00000636070	ASAP3	Q8TDY4	903 aa		18.15	■□□□□ 0.5
AMT-229	ENST00000636070	TMEM174	Q8WUU8	243 aa		18.15	■□□□□ 0.5
AMT-229	ENST00000636070	TRAPPC12	Q8WVT3	735 aa		18.15	■□□□□ 0.5
AMT-229	ENST00000636070	AGPAT3	Q9NRZ7	376 aa		18.15	■□□□□ 0.5
AMT-229	ENST00000636070		K7ERI5	159 aa		18.14	■□□□□ 0.5
AMT-229	ENST00000636070	GNAT1	P11488	350 aa		18.14	■□□□□ 0.5
AMT-229	ENST00000636070	PSEN2	P49810	448 aa		18.14	■□□□□ 0.5
AMT-229	ENST00000636070	BEX3	Q00994	111 aa		18.14	■□□□□ 0.5
AMT-229	ENST00000636070	LAMTOR4	Q0VGL1	99 aa		18.14	■□□□□ 0.5
AMT-229	ENST00000636070	MTHFD1L	Q6UB35	978 aa		18.14	■□□□□ 0.5
AMT-229	ENST00000636070	SLC9A9	Q8IVB4	645 aa		18.14	■□□□□ 0.5
AMT-229	ENST00000636070	MAP4K3	Q8IVH8	894 aa		18.14	■□□□□ 0.5
AMT-229	ENST00000636070	KSR1	Q8IVT5	923 aa		18.14	■□□□□ 0.5
AMT-229	ENST00000636070	EEF2KMT	Q96G04	330 aa		18.14	■□□□□ 0.5
AMT-229	ENST00000636070	C2orf40	Q9H1Z8	148 aa		18.14	■□□□□ 0.5
AMT-229	ENST00000636070	TMEM134	Q9H6X4	195 aa		18.14	■□□□□ 0.5
AMT-229	ENST00000636070	METTL14	Q9HCE5	456 aa	Known RBP	18.14	■□□□□ 0.5
AMT-229	ENST00000636070	RTN4	Q9NQC3	1192 aa	Known RBP	18.14	■□□□□ 0.5
AMT-229	ENST00000636070	XPNPEP3	Q9NQH7	507 aa		18.14	■□□□□ 0.5
AMT-229	ENST00000636070	ARID2	Q68CP9	1835 aa		18.14	■□□□□ 0.49
AMT-229	ENST00000636070	HAS3	O00219	553 aa		18.14	■□□□□ 0.49
AMT-229	ENST00000636070	SLC16A3	O15427	465 aa	Known RBP	18.14	■□□□□ 0.49
AMT-229	ENST00000636070	EPB41	P11171	864 aa	Known RBP	18.14	■□□□□ 0.49
AMT-229	ENST00000636070	PRKCSH	P14314	528 aa	Predicted RBP	18.14	■□□□□ 0.49
AMT-229	ENST00000636070	CCND3	P30281	292 aa	Predicted RBP	18.14	■□□□□ 0.49
AMT-229	ENST00000636070	MARS	P56192	900 aa	Known RBP	18.14	■□□□□ 0.49
AMT-229	ENST00000636070	PURA	Q00577	322 aa	Known RBP	18.14	■□□□□ 0.49
AMT-229	ENST00000636070	CDC42EP1	Q00587	391 aa		18.14	■□□□□ 0.49
AMT-229	ENST00000636070	POU5F1B	Q06416	359 aa		18.14	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms