RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 TUBE1Q9UJT0 475 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 TLK1Q9UKI8 766 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 TCP11X1B4DZS4 312 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 ADCY3O60266 1144 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 DNAJC6O75061 913 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 MARK3P27448 753 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 OSTNP61366 133 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 RWDD4Q6NW29 188 aaKnown RBP10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 ANO5Q75V66 913 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 FAM186BQ8IYM0 893 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 SUCLG2Q96I99 432 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 TRIM45Q9H8W5 580 aaPredicted RBP10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 UBAP1Q9NZ09 502 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 EPS15L1Q9UBC2 864 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 PTPN22Q9Y2R2 807 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 SRPRBQ9Y5M8 271 aaKnown RBP10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 MAGI3Q5TCQ9 1506 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 GOLGA8SH3BPF8 625 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 HOXD10P28358 340 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 ADAM9Q13443 819 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 OR6B2Q6IFH4 312 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 ZNF654Q8IZM8 581 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 CMTR1Q8N1G2 835 aaKnown RBP10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 KCTD6Q8NC69 237 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 DDX17Q92841 729 aaKnown RBP10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 EXT2Q93063 718 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 SLC39A2Q9NP94 309 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 IQSEC2Q5JU85 1478 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 DENND3A2RUS2 1198 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 CHEK2O96017 543 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 FESP07332 822 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 NNMTP40261 264 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 CYP4A11Q02928 519 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 GRAMD1BQ3KR37 738 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 SPOPLQ6IQ16 392 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 DARS2Q6PI48 645 aaKnown RBP10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 ACCSQ96QU6 501 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 UNC45AQ9H3U1 944 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 CUEDC2Q9H467 287 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 ZNF212Q9UDV6 495 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 GGT7Q9UJ14 662 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 PACSIN2Q9UNF0 486 aaPredicted RBP10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 ATP10AO60312 1499 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 NUP153P49790 1475 aaKnown RBP10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 O00370 1275 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 IMPDH2P12268 514 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 TMEM259Q4ZIN3 620 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 AENQ8WTP8 325 aaKnown RBP10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 TRIM11Q96F44 468 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 YIPF2Q9BWQ6 316 aa10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 CPSF1Q10570 1443 aaKnown RBP10.49□□□□□ -0.73
SPTAN1-228ENST00000635853 DYTNA2CJ06 578 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 KLRF2D3W0D1 207 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 POC1B-GALNT4F8VUJ3 575 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 KRT1P04264 644 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 DSG1Q02413 1049 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 KRT27Q7Z3Y8 459 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 RBBP8NLQ8NC74 664 aaPredicted RBP10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 CFAP36Q96G28 342 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 CEP19Q96LK0 163 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 HEXIM2Q96MH2 286 aaKnown RBP10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 METTL14Q9HCE5 456 aaKnown RBP10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 NDUFB9Q9Y6M9 179 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 A0A1W2PQC6 194 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 NCK2O43639 380 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 EEF1DP29692 281 aaKnown RBP10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 ZCWPW2Q504Y3 356 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 C1orf146Q5VVC0 180 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 TRIM67Q6ZTA4 783 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 WDR48Q8TAF3 677 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 PPWD1Q96BP3 646 aaKnown RBP10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 TEX12Q9BXU0 123 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 USP44Q9H0E7 712 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 MAGEF1Q9HAY2 307 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 CAPN11Q9UMQ6 739 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 INPP5FQ9Y2H2 1132 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 H2AFZP0C0S5 128 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 PSMC1P62191 440 aaKnown RBP10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 NR1H3Q13133 447 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 PAPD7Q5XG87 772 aaKnown RBP10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 H2AFVQ71UI9 128 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 RASSF3Q86WH2 238 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 ARL10Q8N8L6 244 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 ZNF579Q8NAF0 562 aaKnown RBP10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 FOSP01100 380 aaPredicted RBP10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 MCF2P10911 925 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 BLVRAP53004 296 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 DYNLT1P63172 113 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 USPL1Q5W0Q7 1092 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 RGS9BPQ6ZS82 235 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 WDR75Q8IWA0 830 aaKnown RBP10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 PNMA1Q8ND90 353 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 ENGASEQ8NFI3 743 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 DEPDC1BQ8WUY9 529 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 WDR60Q8WVS4 1066 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 FARP1Q9Y4F1 1045 aaPredicted RBP10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 PODXLO00592 558 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 STRNO43815 780 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 MAN1A2O60476 641 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms