RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 GIT1Q9Y2X7 761 aa3.53□□□□□ -1.84
SMARCB1-208ENST00000634926 NPFFR2Q9Y5X5 522 aa3.53□□□□□ -1.84
SMARCB1-208ENST00000634926 EFCAB6Q5THR3 1501 aa3.53□□□□□ -1.84
SMARCB1-208ENST00000634926 VPS8Q8N3P4 1428 aa3.53□□□□□ -1.85
SMARCB1-208ENST00000634926 TET3O43151 1660 aa3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 MTUS2Q5JR59 1369 aa3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 TNRQ92752 1358 aa3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 DISP3Q9P2K9 1392 aa3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 ZNF644Q9H582 1327 aaPredicted RBP3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 CAPN14A8MX76 684 aa3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 PPM1GO15355 546 aaPredicted RBP3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 PDPK1O15530 556 aa3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 ETV4P43268 484 aa3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 HGFACQ04756 655 aa3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 RASGRF1Q13972 1273 aa3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 GRM7Q14831 915 aa3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 SLC35F1Q5T1Q4 408 aa3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 OTOP3Q7RTS5 596 aa3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 TRIM48Q8IWZ4 208 aa3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 D2HGDHQ8N465 521 aa3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 CRACR2BQ8N4Y2 399 aaPredicted RBP3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 MLST8Q9BVC4 326 aa3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 ZDHHC5Q9C0B5 715 aa3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 SYNPO2LQ9H987 977 aa3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 AURKAIP1Q9NWT8 199 aaPredicted RBP3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 SH3BP1Q9Y3L3 701 aa3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 ADGRB3O60242 1522 aa3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 DUOX2Q9NRD8 1548 aa3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 SCAF11Q99590 1463 aaKnown RBP3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 NPHP4O75161 1426 aaPredicted RBP3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 MIA2Q96PC5 1412 aa3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 ERBINQ96RT1 1412 aa3.52□□□□□ -1.85
SMARCB1-208ENST00000634926 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 TMEM191CA6NGB0 347 aa3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 CCDC85CA6NKD9 419 aa3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 CUTAO60888 179 aa3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 ADCY8P40145 1251 aa3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 GRIA2P42262 883 aa3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 KCNQ1P51787 676 aa3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 HNRNPMP52272 730 aaKnown RBP eCLIP3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 IFRD2Q12894 506 aaPredicted RBP3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 TOB2Q14106 344 aaPredicted RBP3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 PLEKHG4Q58EX7 1191 aa3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 ZMAT1Q5H9K5 638 aa3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 HABP4Q5JVS0 413 aaKnown RBP3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 LILRB2Q8N423 598 aa3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 UHMK1Q8TAS1 419 aaKnown RBP3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 MICAL1Q8TDZ2 1067 aa3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 ZNF669Q96BR6 464 aaPredicted RBP3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 DNAJC7Q99615 494 aa3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 NRDE2Q9H7Z3 1164 aa3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 ST7Q9NRC1 585 aa3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 ADARB2Q9NS39 739 aaKnown RBP3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 PUF60Q9UHX1 559 aaKnown RBP3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 CDC42EP3Q9UKI2 254 aa3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 ADGRL2O95490 1459 aa3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 MYOM3Q5VTT5 1437 aa3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 PTPN23Q9H3S7 1636 aa3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 MYO5BQ9ULV0 1848 aa3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 UNC13BO14795 1591 aa3.51□□□□□ -1.85
SMARCB1-208ENST00000634926 NKTRP30414 1462 aaKnown RBP3.5□□□□□ -1.85
SMARCB1-208ENST00000634926 KRIT1O00522 736 aa3.5□□□□□ -1.85
SMARCB1-208ENST00000634926 GJB6O95452 261 aa3.5□□□□□ -1.85
SMARCB1-208ENST00000634926 PEX11BO96011 259 aa3.5□□□□□ -1.85
SMARCB1-208ENST00000634926 CDK11BP21127 795 aaKnown RBP3.5□□□□□ -1.85
SMARCB1-208ENST00000634926 KCNJ6P48051 423 aa3.5□□□□□ -1.85
SMARCB1-208ENST00000634926 CLK3P49761 638 aaKnown RBP3.5□□□□□ -1.85
SMARCB1-208ENST00000634926 IL13RA1P78552 427 aa3.5□□□□□ -1.85
SMARCB1-208ENST00000634926 SAFB2Q14151 953 aaKnown RBP eCLIP3.5□□□□□ -1.85
SMARCB1-208ENST00000634926 ACAP1Q15027 740 aa3.5□□□□□ -1.85
SMARCB1-208ENST00000634926 LARP1BQ659C4 914 aaKnown RBP3.5□□□□□ -1.85
SMARCB1-208ENST00000634926 RHOUQ7L0Q8 258 aa3.5□□□□□ -1.85
SMARCB1-208ENST00000634926 FAM178BQ8IXR5 827 aa3.5□□□□□ -1.85
SMARCB1-208ENST00000634926 JMYQ8N9B5 988 aa3.5□□□□□ -1.85
SMARCB1-208ENST00000634926 ST13P5Q8NFI4 369 aaPredicted RBP3.5□□□□□ -1.85
SMARCB1-208ENST00000634926 OR14K1Q8NGZ2 314 aa3.5□□□□□ -1.85
SMARCB1-208ENST00000634926 SH3TC2Q8TF17 1288 aa3.5□□□□□ -1.85
SMARCB1-208ENST00000634926 TMX1Q9H3N1 280 aa3.5□□□□□ -1.85
SMARCB1-208ENST00000634926 RIOX1Q9H6W3 641 aa3.5□□□□□ -1.85
SMARCB1-208ENST00000634926 CFDP1Q9UEE9 299 aaPredicted RBP3.5□□□□□ -1.85
SMARCB1-208ENST00000634926 COL16A1Q07092 1604 aaPredicted RBP3.5□□□□□ -1.85
SMARCB1-208ENST00000634926 NOS1P29475 1434 aa3.5□□□□□ -1.85
SMARCB1-208ENST00000634926 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.5□□□□□ -1.857e-16■■■■■ 28.1
SMARCB1-208ENST00000634926 GCC2Q8IWJ2 1684 aa3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 ROBO1Q9Y6N7 1651 aa3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 TMEM131LA2VDJ0 1609 aa3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 TCRBV5S4A2TA0A5A2 114 aa3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 GRID2IPA4D2P6 1211 aa3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 MAFKO60675 156 aa3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 FAM20BO75063 409 aa3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 DDAH1O94760 285 aa3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 NR4A1P22736 598 aa3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 STAT3P40763 770 aa3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 ZNF143P52747 638 aaPredicted RBP3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 EPHA5P54756 1037 aa3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 DBPQ10586 325 aaPredicted RBP3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 NCAPHQ15003 741 aa3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 RNF187Q5TA31 235 aaPredicted RBP3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 TRIM68Q6AZZ1 485 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms