RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 DENND3A2RUS2 1198 aa22.27■■□□□ 1.16
R3HCC1-210ENST00000625275 SPTLC2O15270 562 aa22.27■■□□□ 1.16
R3HCC1-210ENST00000625275 IBSPP21815 317 aaPredicted RBP22.27■■□□□ 1.16
R3HCC1-210ENST00000625275 FXR2P51116 673 aaKnown RBP eCLIP22.27■■□□□ 1.16
R3HCC1-210ENST00000625275 EFCAB12Q6NXP0 572 aa22.27■■□□□ 1.16
R3HCC1-210ENST00000625275 DTHD1Q6ZMT9 781 aa22.27■■□□□ 1.16
R3HCC1-210ENST00000625275 MIER3Q7Z3K6 550 aa22.27■■□□□ 1.16
R3HCC1-210ENST00000625275 P2RX5Q93086 422 aa22.27■■□□□ 1.16
R3HCC1-210ENST00000625275 RGS18Q9NS28 235 aa22.27■■□□□ 1.16
R3HCC1-210ENST00000625275 RNF216Q9NWF9 866 aaPredicted RBP22.27■■□□□ 1.16
R3HCC1-210ENST00000625275 FBXO2Q9UK22 296 aaPredicted RBP22.27■■□□□ 1.16
R3HCC1-210ENST00000625275 AKT3Q9Y243 479 aa22.27■■□□□ 1.16
R3HCC1-210ENST00000625275 VWA3AA6NCI4 1184 aa22.26■■□□□ 1.15
R3HCC1-210ENST00000625275 POTEMA6NI47 508 aa22.26■■□□□ 1.15
R3HCC1-210ENST00000625275 TMOD1P28289 359 aa22.26■■□□□ 1.15
R3HCC1-210ENST00000625275 GATMP50440 423 aa22.26■■□□□ 1.15
R3HCC1-210ENST00000625275 COL19A1Q14993 1142 aa22.26■■□□□ 1.15
R3HCC1-210ENST00000625275 LRRC71Q8N4P6 559 aa22.26■■□□□ 1.15
R3HCC1-210ENST00000625275 LEO1Q8WVC0 666 aaPredicted RBP22.26■■□□□ 1.15
R3HCC1-210ENST00000625275 PABPC5Q96DU9 382 aaKnown RBP22.26■■□□□ 1.15
R3HCC1-210ENST00000625275 RCOR1Q9UKL0 485 aa22.26■■□□□ 1.15
R3HCC1-210ENST00000625275 PCDHB7Q9Y5E2 793 aa22.26■■□□□ 1.15
R3HCC1-210ENST00000625275 C9IYK1 514 aa22.25■■□□□ 1.15
R3HCC1-210ENST00000625275 EML1O00423 815 aa22.25■■□□□ 1.15
R3HCC1-210ENST00000625275 GRIN1Q05586 938 aa22.25■■□□□ 1.15
R3HCC1-210ENST00000625275 SLC24A5Q71RS6 500 aa22.25■■□□□ 1.15
R3HCC1-210ENST00000625275 ZNF710Q8N1W2 664 aa22.25■■□□□ 1.15
R3HCC1-210ENST00000625275 IGSF22Q8N9C0 903 aa22.25■■□□□ 1.15
R3HCC1-210ENST00000625275 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.25■■□□□ 1.15
R3HCC1-210ENST00000625275 NEK9Q8TD19 979 aa22.25■■□□□ 1.15
R3HCC1-210ENST00000625275 KCNG4Q8TDN1 519 aa22.25■■□□□ 1.15
R3HCC1-210ENST00000625275 SPATA32Q96LK8 384 aa22.25■■□□□ 1.15
R3HCC1-210ENST00000625275 SCAND2PQ9GZW5 306 aaPredicted RBP22.25■■□□□ 1.15
R3HCC1-210ENST00000625275 GDPD2Q9HCC8 539 aa22.25■■□□□ 1.15
R3HCC1-210ENST00000625275 PPP6R2O75170 966 aa22.24■■□□□ 1.15
R3HCC1-210ENST00000625275 NLRP11P59045 1033 aaKnown RBP22.24■■□□□ 1.15
R3HCC1-210ENST00000625275 TBC1D8BQ0IIM8 1120 aa22.24■■□□□ 1.15
R3HCC1-210ENST00000625275 NAALADL2Q58DX5 795 aa22.24■■□□□ 1.15
R3HCC1-210ENST00000625275 NCAPH2Q6IBW4 605 aa22.24■■□□□ 1.15
R3HCC1-210ENST00000625275 ALG13Q9NP73 1137 aaKnown RBP22.24■■□□□ 1.15
R3HCC1-210ENST00000625275 SEPT9Q9UHD8 586 aaPredicted RBP22.24■■□□□ 1.15
R3HCC1-210ENST00000625275 PLAGL2Q9UPG8 496 aa22.24■■□□□ 1.15
R3HCC1-210ENST00000625275 SRPRBQ9Y5M8 271 aaKnown RBP22.24■■□□□ 1.15
R3HCC1-210ENST00000625275 KRI1Q8N9T8 703 aaKnown RBP22.23■■□□□ 1.15
R3HCC1-210ENST00000625275 ADAMTS10Q9H324 1103 aa22.23■■□□□ 1.15
R3HCC1-210ENST00000625275 H3BQ06 376 aaPredicted RBP22.22■■□□□ 1.15
R3HCC1-210ENST00000625275 NCK2O43639 380 aa22.22■■□□□ 1.15
R3HCC1-210ENST00000625275 ITGB1P05556 798 aa22.22■■□□□ 1.15
R3HCC1-210ENST00000625275 PDIA5Q14554 519 aa22.22■■□□□ 1.15
R3HCC1-210ENST00000625275 DSC3Q14574 896 aa22.22■■□□□ 1.15
R3HCC1-210ENST00000625275 TARBP2Q15633 366 aaKnown RBP22.22■■□□□ 1.15
R3HCC1-210ENST00000625275 PUS10Q3MIT2 529 aaKnown RBP22.22■■□□□ 1.15
R3HCC1-210ENST00000625275 XKR3Q5GH77 459 aa22.22■■□□□ 1.15
R3HCC1-210ENST00000625275 PTCRAQ6ISU1 281 aaPredicted RBP22.22■■□□□ 1.15
R3HCC1-210ENST00000625275 EP400NLQ6ZTU2 488 aa22.22■■□□□ 1.15
R3HCC1-210ENST00000625275 CLIC6Q96NY7 704 aa22.22■■□□□ 1.15
R3HCC1-210ENST00000625275 RAB34Q9BZG1 259 aa22.22■■□□□ 1.15
R3HCC1-210ENST00000625275 CLDND1Q9NY35 253 aa22.22■■□□□ 1.15
R3HCC1-210ENST00000625275 PP2D1A8MPX8 630 aa22.22■■□□□ 1.15
R3HCC1-210ENST00000625275 CSPG5O95196 566 aa22.22■■□□□ 1.15
R3HCC1-210ENST00000625275 IL9P15248 144 aa22.22■■□□□ 1.15
R3HCC1-210ENST00000625275 ME1P48163 572 aa22.22■■□□□ 1.15
R3HCC1-210ENST00000625275 GPC3P51654 580 aa22.22■■□□□ 1.15
R3HCC1-210ENST00000625275 KLHL23Q8NBE8 558 aa22.22■■□□□ 1.15
R3HCC1-210ENST00000625275 SCLT1Q96NL6 688 aa22.22■■□□□ 1.15
R3HCC1-210ENST00000625275 NIFKQ9BYG3 293 aaKnown RBP22.22■■□□□ 1.15
R3HCC1-210ENST00000625275 TMEM161AQ9NX61 479 aa22.22■■□□□ 1.15
R3HCC1-210ENST00000625275 LRWD1Q9UFC0 647 aa22.22■■□□□ 1.15
R3HCC1-210ENST00000625275 TBKBP1A7MCY6 615 aa22.21■■□□□ 1.15
R3HCC1-210ENST00000625275 EIF4BP23588 611 aaKnown RBP22.21■■□□□ 1.15
R3HCC1-210ENST00000625275 HYAL1Q12794 435 aa22.21■■□□□ 1.15
R3HCC1-210ENST00000625275 CAMK1Q14012 370 aa22.21■■□□□ 1.15
R3HCC1-210ENST00000625275 MTERF2Q49AM1 385 aa22.21■■□□□ 1.15
R3HCC1-210ENST00000625275 CLEC17AQ6ZS10 378 aa22.21■■□□□ 1.15
R3HCC1-210ENST00000625275 CSRNP2Q9H175 543 aa22.21■■□□□ 1.15
R3HCC1-210ENST00000625275 ELAC1Q9H777 363 aaKnown RBP22.21■■□□□ 1.15
R3HCC1-210ENST00000625275 PCDHA7Q9UN72 937 aa22.21■■□□□ 1.15
R3HCC1-210ENST00000625275 GRXCR2A6NFK2 248 aa22.2■■□□□ 1.14
R3HCC1-210ENST00000625275 STBD1O95210 358 aa22.2■■□□□ 1.14
R3HCC1-210ENST00000625275 DNAJB1P25685 340 aa22.2■■□□□ 1.14
R3HCC1-210ENST00000625275 CDC25AP30304 524 aa22.2■■□□□ 1.14
R3HCC1-210ENST00000625275 LONP1P36776 959 aaKnown RBP22.2■■□□□ 1.14
R3HCC1-210ENST00000625275 FAM189BP81408 668 aa22.2■■□□□ 1.14
R3HCC1-210ENST00000625275 AXDND1Q5T1B0 1012 aaPredicted RBP22.2■■□□□ 1.14
R3HCC1-210ENST00000625275 FAM102BQ5T8I3 360 aa22.2■■□□□ 1.14
R3HCC1-210ENST00000625275 FAM178BQ8IXR5 827 aa22.2■■□□□ 1.14
R3HCC1-210ENST00000625275 SPPL3Q8TCT6 385 aa22.2■■□□□ 1.14
R3HCC1-210ENST00000625275 ZNF668Q96K58 619 aaPredicted RBP22.2■■□□□ 1.14
R3HCC1-210ENST00000625275 ATP6V0A4Q9HBG4 840 aa22.2■■□□□ 1.14
R3HCC1-210ENST00000625275 TMEM150BA6NC51 233 aa22.19■■□□□ 1.14
R3HCC1-210ENST00000625275 DARSP14868 501 aaKnown RBP22.19■■□□□ 1.14
R3HCC1-210ENST00000625275 EPHA7Q15375 998 aa22.19■■□□□ 1.14
R3HCC1-210ENST00000625275 CTC1Q2NKJ3 1217 aa22.19■■□□□ 1.14
R3HCC1-210ENST00000625275 SPECC1Q5M775 1068 aa22.19■■□□□ 1.14
R3HCC1-210ENST00000625275 SPOUT1Q5T280 376 aaKnown RBP22.19■■□□□ 1.14
R3HCC1-210ENST00000625275 NLRP7Q8WX94 980 aa22.19■■□□□ 1.14
R3HCC1-210ENST00000625275 PPP2R3CQ969Q6 453 aa22.19■■□□□ 1.14
R3HCC1-210ENST00000625275 AK8Q96MA6 479 aa22.19■■□□□ 1.14
R3HCC1-210ENST00000625275 CEP89Q96ST8 783 aa22.19■■□□□ 1.14
R3HCC1-210ENST00000625275 EIF2AK1Q9BQI3 630 aaKnown RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms