RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 HEXIM1O94992 359 aaKnown RBP9.05□□□□□ -0.96
SND1-IT1-201ENST00000623342 EGFRP00533 1210 aa9.05□□□□□ -0.96
SND1-IT1-201ENST00000623342 GLI1P08151 1106 aa9.05□□□□□ -0.96
SND1-IT1-201ENST00000623342 PLS3P13797 630 aa9.05□□□□□ -0.96
SND1-IT1-201ENST00000623342 CAPN2P17655 700 aa9.05□□□□□ -0.96
SND1-IT1-201ENST00000623342 RFX1P22670 979 aa9.05□□□□□ -0.96
SND1-IT1-201ENST00000623342 HNRNPH2P55795 449 aaKnown RBP9.05□□□□□ -0.96
SND1-IT1-201ENST00000623342 TNFAIP1Q13829 316 aa9.05□□□□□ -0.96
SND1-IT1-201ENST00000623342 MUM1L1Q5H9M0 696 aa9.05□□□□□ -0.96
SND1-IT1-201ENST00000623342 INTS8Q75QN2 995 aaKnown RBP9.05□□□□□ -0.96
SND1-IT1-201ENST00000623342 SLFN11Q7Z7L1 901 aa9.05□□□□□ -0.96
SND1-IT1-201ENST00000623342 LNX1Q8TBB1 728 aaPredicted RBP9.05□□□□□ -0.96
SND1-IT1-201ENST00000623342 ACTRT1Q8TDG2 376 aa9.05□□□□□ -0.96
SND1-IT1-201ENST00000623342 AFAP1L1Q8TED9 768 aa9.05□□□□□ -0.96
SND1-IT1-201ENST00000623342 TEPSINQ96N21 525 aa9.05□□□□□ -0.96
SND1-IT1-201ENST00000623342 ACCSQ96QU6 501 aa9.05□□□□□ -0.96
SND1-IT1-201ENST00000623342 KRT12Q99456 494 aa9.05□□□□□ -0.96
SND1-IT1-201ENST00000623342 GPR88Q9GZN0 384 aa9.05□□□□□ -0.96
SND1-IT1-201ENST00000623342 HOMER2Q9NSB8 354 aa9.05□□□□□ -0.96
SND1-IT1-201ENST00000623342 TMEM59LQ9UK28 342 aa9.05□□□□□ -0.96
SND1-IT1-201ENST00000623342 YWHABP31946 246 aaKnown RBP9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 ACTN2P35609 894 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 GALCP54803 685 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 RNASE9P60153 205 aaKnown RBP9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 GUCY2DQ02846 1103 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 PAK2Q13177 524 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 ALS2CLQ60I27 953 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 PEX26Q7Z412 305 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 C12orf56Q8IXR9 622 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 RDH13Q8NBN7 331 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 OLIG1Q8TAK6 271 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 RIN2Q8WYP3 895 aaPredicted RBP9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 CCDC43Q96MW1 224 aaKnown RBP9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 TAAR1Q96RJ0 339 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 SYT11Q9BT88 431 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 TIPINQ9BVW5 301 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 GOLPH3Q9H4A6 298 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 EPB41L5Q9HCM4 733 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 SUCLA2Q9P2R7 463 aaPredicted RBP9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 PNMA2Q9UL42 364 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 PPP1R9AQ9ULJ8 1098 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 CTDP1Q9Y5B0 961 aaPredicted RBP9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 CEP350Q5VT06 3117 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 CEP104O60308 925 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 CTNND1O60716 968 aaKnown RBP9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 TMEM253P0C7T8 217 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 EIF2AK2P19525 551 aaKnown RBP9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 RPS6P62753 249 aaKnown RBP9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 CETN1Q12798 172 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 PGM5Q15124 567 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 ZSCAN26Q16670 478 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 LEKR1Q6ZMV7 388 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 GLYCTKQ8IVS8 523 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 LMO3Q8TAP4 145 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 JDP2Q8WYK2 163 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 PCIF1Q9H4Z3 704 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 PIM2Q9P1W9 311 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 STXBP5LQ9Y2K9 1186 aa9.04□□□□□ -0.96
SND1-IT1-201ENST00000623342 NCANO14594 1321 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 TMCO5BA8MYB1 307 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 P4HA2O15460 535 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 OPA1O60313 960 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 ZBED4O75132 1171 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 CLSTN1O94985 981 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 ZBTB48P10074 688 aaPredicted RBP9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 MYCLP12524 364 aaPredicted RBP9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 VCAM1P19320 739 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 BAG6P46379 1132 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 CARSP49589 748 aaKnown RBP9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 VAMP7P51809 220 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 JAK3P52333 1124 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 ZNF280AP59817 542 aaPredicted RBP9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 SNRPFP62306 86 aaKnown RBP9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 GTF2BQ00403 316 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 SPP2Q13103 211 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 DGKZQ13574 1117 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 KIF22Q14807 665 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 ARHGAP44Q17R89 818 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 PHLDB3Q6NSJ2 640 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 DAAM2Q86T65 1068 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 C4orf19Q8IY42 314 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 METTL13Q8N6R0 699 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 SLC16A10Q8TF71 515 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 SCFD2Q8WU76 684 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 CTNNBL1Q8WYA6 563 aaPredicted RBP9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 VTI1AQ96AJ9 217 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 CALR3Q96L12 384 aaKnown RBP9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 IWS1Q96ST2 819 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 ST6GALNAC4Q9H4F1 302 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 NFU1Q9UMS0 254 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 ASTN2O75129 1339 aaPredicted RBP9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 EMSYQ7Z589 1322 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 TISP43B9A030 160 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 GOLGA8KD6RF30 607 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 PGRMC1O00264 195 aaKnown RBP9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 MAPK13O15264 365 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 RAD51CO43502 376 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 HSF2BPO75031 334 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 RPS6KA5O75582 802 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 FDX1P10109 184 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms