RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 SMIM10L2AP0DMW4 78 aa11.73□□□□□ -0.53
CPNE3-212ENST00000621783 SMIM10L2BP0DMW5 78 aa11.73□□□□□ -0.53
CPNE3-212ENST00000621783 GRK4P32298 578 aa11.73□□□□□ -0.53
CPNE3-212ENST00000621783 NAMPTP43490 491 aa11.73□□□□□ -0.53
CPNE3-212ENST00000621783 CLCN3P51790 818 aa11.73□□□□□ -0.53
CPNE3-212ENST00000621783 ZNF75DP51815 510 aa11.73□□□□□ -0.53
CPNE3-212ENST00000621783 SMTNP53814 917 aa11.73□□□□□ -0.53
CPNE3-212ENST00000621783 GTF2BQ00403 316 aa11.73□□□□□ -0.53
CPNE3-212ENST00000621783 FANCCQ00597 558 aa11.73□□□□□ -0.53
CPNE3-212ENST00000621783 MKRN4PQ13434 485 aaPredicted RBP11.73□□□□□ -0.53
CPNE3-212ENST00000621783 CAPSQ13938 189 aa11.73□□□□□ -0.53
CPNE3-212ENST00000621783 PPP2R5AQ15172 486 aa11.73□□□□□ -0.53
CPNE3-212ENST00000621783 EDRF1Q3B7T1 1238 aa11.73□□□□□ -0.53
CPNE3-212ENST00000621783 IER5Q5VY09 327 aa11.73□□□□□ -0.53
CPNE3-212ENST00000621783 LRRC55Q6ZSA7 311 aa11.73□□□□□ -0.53
CPNE3-212ENST00000621783 HAUS6Q7Z4H7 955 aa11.73□□□□□ -0.53
CPNE3-212ENST00000621783 ZC3H3Q8IXZ2 948 aaKnown RBP11.73□□□□□ -0.53
CPNE3-212ENST00000621783 LINC01465Q8N7H1 131 aa11.73□□□□□ -0.53
CPNE3-212ENST00000621783 DNAJC5GQ8N7S2 189 aa11.73□□□□□ -0.53
CPNE3-212ENST00000621783 TMEM161BQ8NDZ6 487 aa11.73□□□□□ -0.53
CPNE3-212ENST00000621783 LMBR1Q8WVP7 490 aa11.73□□□□□ -0.53
CPNE3-212ENST00000621783 PSPC1Q8WXF1 523 aaKnown RBP11.73□□□□□ -0.53
CPNE3-212ENST00000621783 SRRTQ9BXP5 876 aaKnown RBP11.73□□□□□ -0.53
CPNE3-212ENST00000621783 TRIM5Q9C035 493 aa11.73□□□□□ -0.53
CPNE3-212ENST00000621783 ARHGAP28Q9P2N2 729 aa11.73□□□□□ -0.53
CPNE3-212ENST00000621783 TRAF3IP3Q9Y228 551 aa11.73□□□□□ -0.53
CPNE3-212ENST00000621783 PHLPP2Q6ZVD8 1323 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 DENND3A2RUS2 1198 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 LRRIQ4A6NIV6 560 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 KCNJ18B7U540 433 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 PDXKO00764 312 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 MAGEB2O15479 319 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 TGFB1I1O43294 461 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 CALUO43852 315 aaPredicted RBP11.72□□□□□ -0.53
CPNE3-212ENST00000621783 SERPINC1P01008 464 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 CDK11BP21127 795 aaKnown RBP11.72□□□□□ -0.53
CPNE3-212ENST00000621783 CST5P28325 142 aaPredicted RBP11.72□□□□□ -0.53
CPNE3-212ENST00000621783 CHMP4BP1P59074 171 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 SPAG1Q07617 926 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 CCDC173Q0VFZ6 552 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 KCNJ12Q14500 433 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 GNASQ5JWF2 1037 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 EFCAB12Q6NXP0 572 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 MTHFD1LQ6UB35 978 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 IRF2BP1Q8IU81 584 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 MAP4K3Q8IVH8 894 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 FAM114A1Q8IWE2 563 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 METTL13Q8N6R0 699 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 RETREG2Q8NC44 543 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 KLHDC9Q8NEP7 349 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 DEPTORQ8TB45 409 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 PPP1R13LQ8WUF5 828 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 PDLIM2Q96JY6 352 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 CNOT6LQ96LI5 555 aaKnown RBP11.72□□□□□ -0.53
CPNE3-212ENST00000621783 ACCSQ96QU6 501 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 NTPCRQ9BSD7 190 aaKnown RBP11.72□□□□□ -0.53
CPNE3-212ENST00000621783 MTG1Q9BT17 334 aaPredicted RBP11.72□□□□□ -0.53
CPNE3-212ENST00000621783 XPO4Q9C0E2 1151 aaKnown RBP11.72□□□□□ -0.53
CPNE3-212ENST00000621783 IKZF4Q9H2S9 585 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 TMEM206Q9H813 350 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 SUGCTQ9HAC7 445 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 IFNKQ9P0W0 207 aa11.72□□□□□ -0.53
CPNE3-212ENST00000621783 SUCLA2Q9P2R7 463 aaPredicted RBP11.72□□□□□ -0.53
CPNE3-212ENST00000621783 MAGEC2Q9UBF1 373 aaPredicted RBP11.72□□□□□ -0.53
CPNE3-212ENST00000621783 NRCAMQ92823 1304 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 RRN3P2A6NIE6 340 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 H0YCG3 227 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 ZEB2O60315 1214 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 FGFR1OPO95684 399 aaKnown RBP11.71□□□□□ -0.53
CPNE3-212ENST00000621783 NR3C1P04150 777 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 NR2F2P24468 414 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 EEF1GP26641 437 aaKnown RBP11.71□□□□□ -0.53
CPNE3-212ENST00000621783 KLRC1P26715 233 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 FKBP3Q00688 224 aaKnown RBP11.71□□□□□ -0.53
CPNE3-212ENST00000621783 LAMTOR4Q0VGL1 99 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 MXD4Q14582 209 aaPredicted RBP11.71□□□□□ -0.53
CPNE3-212ENST00000621783 KRT31Q15323 416 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 NFIL3Q16649 462 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 TCP11X2Q5H9J9 407 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 MARCH8Q5T0T0 291 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 CXCL17Q6UXB2 119 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 HS2ST1Q7LGA3 356 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 TAS1R3Q7RTX0 852 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 APTXQ7Z2E3 356 aaKnown RBP11.71□□□□□ -0.53
CPNE3-212ENST00000621783 SYCP3Q8IZU3 236 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 SH3TC2Q8TF17 1288 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 PRPF31Q8WWY3 499 aaKnown RBP11.71□□□□□ -0.53
CPNE3-212ENST00000621783 KCNN1Q92952 543 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 EEF2KMTQ96G04 330 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 MRFAP1L1Q96HT8 127 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 CEP63Q96MT8 703 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 GBP3Q9H0R5 595 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 HMX1Q9NP08 348 aaPredicted RBP11.71□□□□□ -0.53
CPNE3-212ENST00000621783 AGPAT3Q9NRZ7 376 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 SETD4Q9NVD3 440 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 TAB2Q9NYJ8 693 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 LIMA1Q9UHB6 759 aaKnown RBP11.71□□□□□ -0.53
CPNE3-212ENST00000621783 KCNG1Q9UIX4 513 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 TBX20Q9UMR3 447 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 EXOC7Q9UPT5 735 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms