RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 C1orf210Q8IVY1 113 aa7.28□□□□□ -1.24
VPS29-212ENST00000621131 NXPE1Q8N323 547 aa7.28□□□□□ -1.24
VPS29-212ENST00000621131 D2HGDHQ8N465 521 aa7.28□□□□□ -1.24
VPS29-212ENST00000621131 NINJ1Q92982 152 aa7.28□□□□□ -1.24
VPS29-212ENST00000621131 FANCLQ9NW38 375 aa7.28□□□□□ -1.24
VPS29-212ENST00000621131 IFT57Q9NWB7 429 aa7.28□□□□□ -1.24
VPS29-212ENST00000621131 ZKSCAN5Q9Y2L8 839 aa7.28□□□□□ -1.24
VPS29-212ENST00000621131 RBM8AQ9Y5S9 174 aaKnown RBP7.28□□□□□ -1.24
VPS29-212ENST00000621131 HS3ST3A1Q9Y663 406 aa7.28□□□□□ -1.24
VPS29-212ENST00000621131 PRPF6O94906 941 aaKnown RBP7.27□□□□□ -1.25
VPS29-212ENST00000621131 DSG1Q02413 1049 aa7.27□□□□□ -1.25
VPS29-212ENST00000621131 CLEC14AQ86T13 490 aa7.27□□□□□ -1.25
VPS29-212ENST00000621131 LRRTM3Q86VH5 581 aa7.27□□□□□ -1.25
VPS29-212ENST00000621131 SGMS1Q86VZ5 419 aa7.27□□□□□ -1.25
VPS29-212ENST00000621131 PHYKPLQ8IUZ5 450 aa7.27□□□□□ -1.25
VPS29-212ENST00000621131 ZFPM1Q8IX07 1006 aa7.27□□□□□ -1.25
VPS29-212ENST00000621131 APPBP2Q92624 585 aa7.27□□□□□ -1.25
VPS29-212ENST00000621131 DYDC2Q96IM9 177 aa7.27□□□□□ -1.25
VPS29-212ENST00000621131 RPL10LQ96L21 214 aaKnown RBP7.27□□□□□ -1.25
VPS29-212ENST00000621131 MPHOSPH9Q99550 1183 aa7.27□□□□□ -1.25
VPS29-212ENST00000621131 ZNF341Q9BYN7 854 aa7.27□□□□□ -1.25
VPS29-212ENST00000621131 PITHD1Q9GZP4 211 aaPredicted RBP7.27□□□□□ -1.25
VPS29-212ENST00000621131 ZMAT4Q9H898 229 aa7.27□□□□□ -1.25
VPS29-212ENST00000621131 TOMM22Q9NS69 142 aa7.27□□□□□ -1.25
VPS29-212ENST00000621131 A0A0A6YYJ9 748 aa7.26□□□□□ -1.25
VPS29-212ENST00000621131 NPIPB8E9PQR5 432 aa7.26□□□□□ -1.25
VPS29-212ENST00000621131 KPNA6O60684 536 aa7.26□□□□□ -1.25
VPS29-212ENST00000621131 NEK4P51957 841 aa7.26□□□□□ -1.25
VPS29-212ENST00000621131 BPIFB4P59827 614 aa7.26□□□□□ -1.25
VPS29-212ENST00000621131 DGCR2P98153 550 aa7.26□□□□□ -1.25
VPS29-212ENST00000621131 ADCY2Q08462 1091 aa7.26□□□□□ -1.25
VPS29-212ENST00000621131 CYB5RLQ6IPT4 315 aa7.26□□□□□ -1.25
VPS29-212ENST00000621131 UNQ6494/PRO21346Q6UXR6 183 aa7.26□□□□□ -1.25
VPS29-212ENST00000621131 ZZZ3Q8IYH5 903 aa7.26□□□□□ -1.25
VPS29-212ENST00000621131 ANKRD53Q8N9V6 530 aa7.26□□□□□ -1.25
VPS29-212ENST00000621131 PLA2G15Q8NCC3 412 aa7.26□□□□□ -1.25
VPS29-212ENST00000621131 RTF1Q92541 710 aaKnown RBP7.26□□□□□ -1.25
VPS29-212ENST00000621131 RPGRQ92834 1020 aaKnown RBP7.26□□□□□ -1.25
VPS29-212ENST00000621131 GCDHQ92947 438 aaPredicted RBP7.26□□□□□ -1.25
VPS29-212ENST00000621131 WDR92Q96MX6 357 aa7.26□□□□□ -1.25
VPS29-212ENST00000621131 PCED1AQ9H1Q7 454 aa7.26□□□□□ -1.25
VPS29-212ENST00000621131 POLR3BQ9NW08 1133 aaPredicted RBP7.26□□□□□ -1.25
VPS29-212ENST00000621131 SH3BP1Q9Y3L3 701 aa7.26□□□□□ -1.25
VPS29-212ENST00000621131 A0A1W2PRX2 142 aa7.25□□□□□ -1.25
VPS29-212ENST00000621131 ZNF891A8MT65 544 aaPredicted RBP7.25□□□□□ -1.25
VPS29-212ENST00000621131 HHEXQ03014 270 aa7.25□□□□□ -1.25
VPS29-212ENST00000621131 TCIRG1Q13488 830 aa7.25□□□□□ -1.25
VPS29-212ENST00000621131 PCBP1Q15365 356 aaKnown RBP eCLIP7.25□□□□□ -1.25
VPS29-212ENST00000621131 IGFL4Q6B9Z1 124 aa7.25□□□□□ -1.25
VPS29-212ENST00000621131 TIGD7Q6NT04 549 aaPredicted RBP7.25□□□□□ -1.25
VPS29-212ENST00000621131 USP51Q70EK9 711 aa7.25□□□□□ -1.25
VPS29-212ENST00000621131 CHTF18Q8WVB6 975 aa7.25□□□□□ -1.25
VPS29-212ENST00000621131 MYL10Q9BUA6 226 aa7.25□□□□□ -1.25
VPS29-212ENST00000621131 ZNF703Q9H7S9 590 aaPredicted RBP7.25□□□□□ -1.25
VPS29-212ENST00000621131 DNAI1Q9UI46 699 aa7.25□□□□□ -1.25
VPS29-212ENST00000621131 A0A0A6YYK5 440 aaPredicted RBP7.24□□□□□ -1.25
VPS29-212ENST00000621131 KRTAP23-1A1A580 65 aa7.24□□□□□ -1.25
VPS29-212ENST00000621131 TGM5O43548 720 aa7.24□□□□□ -1.25
VPS29-212ENST00000621131 GAS7O60861 476 aa7.24□□□□□ -1.25
VPS29-212ENST00000621131 C1SP09871 688 aa7.24□□□□□ -1.25
VPS29-212ENST00000621131 SMAD3P84022 425 aaKnown RBP7.24□□□□□ -1.25
VPS29-212ENST00000621131 LRRC32Q14392 662 aa7.24□□□□□ -1.25
VPS29-212ENST00000621131 GAGE13Q4V321 117 aa7.24□□□□□ -1.25
VPS29-212ENST00000621131 KIAA1841Q6NSI8 718 aa7.24□□□□□ -1.25
VPS29-212ENST00000621131 CNNM4Q6P4Q7 775 aa7.24□□□□□ -1.25
VPS29-212ENST00000621131 GAREM2Q75VX8 874 aa7.24□□□□□ -1.25
VPS29-212ENST00000621131 THEMISQ8N1K5 641 aaPredicted RBP7.24□□□□□ -1.25
VPS29-212ENST00000621131 EFHBQ8N7U6 833 aa7.24□□□□□ -1.25
VPS29-212ENST00000621131 C7orf31Q8N865 590 aa7.24□□□□□ -1.25
VPS29-212ENST00000621131 CACTINQ8WUQ7 758 aaKnown RBP7.24□□□□□ -1.25
VPS29-212ENST00000621131 SOX7Q9BT81 388 aa7.24□□□□□ -1.25
VPS29-212ENST00000621131 POFUT1Q9H488 388 aa7.24□□□□□ -1.25
VPS29-212ENST00000621131 ABCC8Q09428 1581 aa7.24□□□□□ -1.25
VPS29-212ENST00000621131 CAPN14A8MX76 684 aa7.23□□□□□ -1.25
VPS29-212ENST00000621131 ELL2O00472 640 aaPredicted RBP7.23□□□□□ -1.25
VPS29-212ENST00000621131 NARSO43776 548 aaKnown RBP7.23□□□□□ -1.25
VPS29-212ENST00000621131 VSIG10L2P0DP72 767 aa7.23□□□□□ -1.25
VPS29-212ENST00000621131 HNRNPLP14866 589 aaKnown RBP eCLIP7.23□□□□□ -1.25
VPS29-212ENST00000621131 PTH1RQ03431 593 aa7.23□□□□□ -1.25
VPS29-212ENST00000621131 FAM111BQ6SJ93 734 aa7.23□□□□□ -1.25
VPS29-212ENST00000621131 DHX37Q8IY37 1157 aaKnown RBP7.23□□□□□ -1.25
VPS29-212ENST00000621131 NIM1KQ8IY84 436 aa7.23□□□□□ -1.25
VPS29-212ENST00000621131 MRIQ9BWK5 157 aa7.23□□□□□ -1.25
VPS29-212ENST00000621131 OSBPL6Q9BZF3 934 aa7.23□□□□□ -1.25
VPS29-212ENST00000621131 AURKAIP1Q9NWT8 199 aaPredicted RBP7.23□□□□□ -1.25
VPS29-212ENST00000621131 THG1LQ9NWX6 298 aaKnown RBP7.23□□□□□ -1.25
VPS29-212ENST00000621131 SYNPO2Q9UMS6 1093 aa7.23□□□□□ -1.25
VPS29-212ENST00000621131 GIT1Q9Y2X7 761 aa7.23□□□□□ -1.25
VPS29-212ENST00000621131 WRNQ14191 1432 aaPredicted RBP eCLIP7.23□□□□□ -1.25
VPS29-212ENST00000621131 UBE2QL1A1L167 161 aa7.22□□□□□ -1.25
VPS29-212ENST00000621131 GOLGA8BA8MQT2 603 aa7.22□□□□□ -1.25
VPS29-212ENST00000621131 DAPK3O43293 454 aa7.22□□□□□ -1.25
VPS29-212ENST00000621131 OPHN1O60890 802 aa7.22□□□□□ -1.25
VPS29-212ENST00000621131 APOL3O95236 402 aa7.22□□□□□ -1.25
VPS29-212ENST00000621131 KLF10Q13118 480 aa7.22□□□□□ -1.25
VPS29-212ENST00000621131 LSM12Q3MHD2 195 aaKnown RBP7.22□□□□□ -1.25
VPS29-212ENST00000621131 DALRD3Q5D0E6 543 aaKnown RBP7.22□□□□□ -1.25
VPS29-212ENST00000621131 JAZF1Q86VZ6 243 aa7.22□□□□□ -1.25
VPS29-212ENST00000621131 TMPRSS6Q8IU80 811 aa7.22□□□□□ -1.25
VPS29-212ENST00000621131 PLEKHG4BQ96PX9 1271 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms