RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 SLC18A3Q16572 532 aa8.95□□□□□ -0.98
ALMS1-208ENST00000620466 MTERF2Q49AM1 385 aa8.95□□□□□ -0.98
ALMS1-208ENST00000620466 GLYCTKQ8IVS8 523 aa8.95□□□□□ -0.98
ALMS1-208ENST00000620466 HDAC11Q96DB2 347 aa8.95□□□□□ -0.98
ALMS1-208ENST00000620466 CHMP6Q96FZ7 201 aa8.95□□□□□ -0.98
ALMS1-208ENST00000620466 DDX27Q96GQ7 796 aaKnown RBP8.95□□□□□ -0.98
ALMS1-208ENST00000620466 SLITRK6Q9H5Y7 841 aa8.95□□□□□ -0.98
ALMS1-208ENST00000620466 SRGAP2BP0DMP2 458 aa8.95□□□□□ -0.98
ALMS1-208ENST00000620466 USP11P51784 963 aa8.95□□□□□ -0.98
ALMS1-208ENST00000620466 RNASELQ05823 741 aaKnown RBP8.95□□□□□ -0.98
ALMS1-208ENST00000620466 ICE2Q659A1 982 aa8.95□□□□□ -0.98
ALMS1-208ENST00000620466 PADI6Q6TGC4 694 aa8.95□□□□□ -0.98
ALMS1-208ENST00000620466 FBXL16Q8N461 479 aa8.95□□□□□ -0.98
ALMS1-208ENST00000620466 ZNF564Q8TBZ8 553 aaPredicted RBP8.95□□□□□ -0.98
ALMS1-208ENST00000620466 FUT8Q9BYC5 575 aa8.95□□□□□ -0.98
ALMS1-208ENST00000620466 CNOT8Q9UFF9 292 aaKnown RBP8.95□□□□□ -0.98
ALMS1-208ENST00000620466 MAD1L1Q9Y6D9 718 aa8.95□□□□□ -0.98
ALMS1-208ENST00000620466 VAMP7P51809 220 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 CCNA1P78396 465 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 SF3B3Q15393 1217 aaKnown RBP8.94□□□□□ -0.98
ALMS1-208ENST00000620466 NUGGCQ68CJ6 796 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 DNAJC7Q99615 494 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 AMACRQ9UHK6 382 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 ANAPC7Q9UJX3 599 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 TCRBV5S4A2TA0A5A2 114 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 TRIM66O15016 1216 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 EIF3HO15372 352 aaKnown RBP eCLIP8.94□□□□□ -0.981e-6■■■■□ 20.5
ALMS1-208ENST00000620466 SLC4A1P02730 911 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 EIF2AK2P19525 551 aaKnown RBP8.94□□□□□ -0.98
ALMS1-208ENST00000620466 RAPH1Q70E73 1250 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 TRAPPC11Q7Z392 1133 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 GBP5Q96PP8 586 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 PPP1R16BQ96T49 567 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 SLC16A3O15427 465 aaKnown RBP8.94□□□□□ -0.98
ALMS1-208ENST00000620466 PSAPP07602 524 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 JADE1Q6IE81 842 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 PHLDB3Q6NSJ2 640 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 ZNF746Q6NUN9 644 aaPredicted RBP8.94□□□□□ -0.98
ALMS1-208ENST00000620466 PDXDC2PQ6P474 469 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 GBP7Q8N8V2 638 aaPredicted RBP8.94□□□□□ -0.98
ALMS1-208ENST00000620466 N4BP2L2Q92802 583 aaPredicted RBP8.94□□□□□ -0.98
ALMS1-208ENST00000620466 EPN3Q9H201 632 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 BCAP29Q9UHQ4 241 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 PPME1Q9Y570 386 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 SSU72P8A0A1W2PR75 194 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 FTLP02792 175 aaPredicted RBP8.94□□□□□ -0.98
ALMS1-208ENST00000620466 TRIM49P0CI25 452 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 TRIM49CP0CI26 452 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 CD58P19256 250 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 HERVK_113P62684 666 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 PPP1R2P3Q6NXS1 205 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 ZNF473Q8WTR7 871 aaKnown RBP8.94□□□□□ -0.98
ALMS1-208ENST00000620466 CFAP36Q96G28 342 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 WDR91A4D1P6 747 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 SLC16A4O15374 487 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 C16orf86Q6ZW13 317 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 MMGT1Q8N4V1 131 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 KCTD6Q8NC69 237 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 CFAP61Q8NHU2 1237 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 HEMGNQ9BXL5 484 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 ANGPTL3Q9Y5C1 460 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 FAM187AA6NFU0 413 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 XPOTO43592 962 aaKnown RBP8.94□□□□□ -0.98
ALMS1-208ENST00000620466 PLEKP08567 350 aaPredicted RBP8.94□□□□□ -0.98
ALMS1-208ENST00000620466 RASA1P20936 1047 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 CHRNA3P32297 505 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 MDH1P40925 334 aaKnown RBP8.94□□□□□ -0.98
ALMS1-208ENST00000620466 NKX1-1Q15270 411 aaPredicted RBP8.94□□□□□ -0.98
ALMS1-208ENST00000620466 RAB44Q7Z6P3 723 aaPredicted RBP8.94□□□□□ -0.98
ALMS1-208ENST00000620466 XXYLT1Q8NBI6 393 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 THOC1Q96FV9 657 aaKnown RBP8.94□□□□□ -0.98
ALMS1-208ENST00000620466 SAYSD1Q9NPB0 183 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 SMYD2Q9NRG4 433 aa8.94□□□□□ -0.98
ALMS1-208ENST00000620466 MAGED2Q9UNF1 606 aaPredicted RBP8.94□□□□□ -0.98
ALMS1-208ENST00000620466 BASP1P80723 227 aaKnown RBP8.93□□□□□ -0.98
ALMS1-208ENST00000620466 RBBP5Q15291 538 aaKnown RBP8.93□□□□□ -0.98
ALMS1-208ENST00000620466 FBXO33Q7Z6M2 555 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 RFFLQ8WZ73 363 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 UBN1Q9NPG3 1134 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 MTMR4Q9NYA4 1195 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 PDXKO00764 312 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 MCF2LO15068 1137 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 EVI5O60447 810 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 MYL3P08590 195 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 MYBP10242 640 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 NMT1P30419 496 aaKnown RBP8.93□□□□□ -0.98
ALMS1-208ENST00000620466 RCN2Q14257 317 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 DARS2Q6PI48 645 aaKnown RBP8.93□□□□□ -0.98
ALMS1-208ENST00000620466 LRIG3Q6UXM1 1119 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 DAGLBQ8NCG7 672 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 HAUS8Q9BT25 410 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 SLC38A10Q9HBR0 1119 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 LRRD1A4D1F6 860 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 KLRK1P26718 216 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 NAB2Q15742 525 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 SCARA5Q6ZMJ2 495 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 RSRC2Q7L4I2 434 aaKnown RBP8.93□□□□□ -0.98
ALMS1-208ENST00000620466 PASD1Q8IV76 773 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 LINC00116Q8NCU8 138 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 SLC7A3Q8WY07 619 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms