RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 USP40Q9NVE5 1235 aa14.2□□□□□ -0.14
MSH6-214ENST00000616033 ASIC3Q9UHC3 531 aa14.2□□□□□ -0.14
MSH6-214ENST00000616033 SPATA31A1Q5TZJ5 1347 aa14.2□□□□□ -0.14
MSH6-214ENST00000616033 KIF3CO14782 793 aa14.2□□□□□ -0.14
MSH6-214ENST00000616033 RTN2O75298 545 aa14.2□□□□□ -0.14
MSH6-214ENST00000616033 SUN1O94901 812 aa14.2□□□□□ -0.14
MSH6-214ENST00000616033 RARAP10276 462 aa14.2□□□□□ -0.14
MSH6-214ENST00000616033 POLE2P56282 527 aa14.2□□□□□ -0.14
MSH6-214ENST00000616033 ANKRD20A2Q5SQ80 823 aa14.2□□□□□ -0.14
MSH6-214ENST00000616033 ANKRD20A1Q5TYW2 823 aa14.2□□□□□ -0.14
MSH6-214ENST00000616033 ANKRD20A3Q5VUR7 823 aa14.2□□□□□ -0.14
MSH6-214ENST00000616033 C1orf54Q8WWF1 131 aa14.2□□□□□ -0.14
MSH6-214ENST00000616033 RMDN2Q96LZ7 410 aa14.2□□□□□ -0.14
MSH6-214ENST00000616033 ADAM7Q9H2U9 754 aa14.2□□□□□ -0.14
MSH6-214ENST00000616033 SLITRK6Q9H5Y7 841 aa14.2□□□□□ -0.14
MSH6-214ENST00000616033 USP15Q9Y4E8 981 aaPredicted RBP14.2□□□□□ -0.14
MSH6-214ENST00000616033 DUOX1Q9NRD9 1551 aa14.2□□□□□ -0.14
MSH6-214ENST00000616033 SPAG7O75391 227 aa14.19□□□□□ -0.14
MSH6-214ENST00000616033 RASA1P20936 1047 aa14.19□□□□□ -0.14
MSH6-214ENST00000616033 MSH2P43246 934 aa14.19□□□□□ -0.14
MSH6-214ENST00000616033 EMC10Q5UCC4 262 aa14.19□□□□□ -0.14
MSH6-214ENST00000616033 RFX8Q6ZV50 586 aa14.19□□□□□ -0.14
MSH6-214ENST00000616033 ZMYND8Q9ULU4 1186 aaPredicted RBP14.19□□□□□ -0.14
MSH6-214ENST00000616033 TAF1P21675 1872 aa14.19□□□□□ -0.14
MSH6-214ENST00000616033 ATP2A2P16615 1042 aaKnown RBP14.19□□□□□ -0.14
MSH6-214ENST00000616033 TARSP26639 723 aaKnown RBP14.19□□□□□ -0.14
MSH6-214ENST00000616033 CDK8P49336 464 aa14.19□□□□□ -0.14
MSH6-214ENST00000616033 SCNN1BP51168 640 aa14.19□□□□□ -0.14
MSH6-214ENST00000616033 IKQ13123 557 aaPredicted RBP14.19□□□□□ -0.14
MSH6-214ENST00000616033 INTS5Q6P9B9 1019 aaKnown RBP14.19□□□□□ -0.14
MSH6-214ENST00000616033 CCDC137Q6PK04 289 aaKnown RBP14.19□□□□□ -0.14
MSH6-214ENST00000616033 NBPF5PQ86XG9 351 aaPredicted RBP14.19□□□□□ -0.14
MSH6-214ENST00000616033 SYCE1Q8N0S2 351 aa14.19□□□□□ -0.14
MSH6-214ENST00000616033 FITM2Q8N6M3 262 aa14.19□□□□□ -0.14
MSH6-214ENST00000616033 ARL10Q8N8L6 244 aa14.19□□□□□ -0.14
MSH6-214ENST00000616033 PIGOQ8TEQ8 1089 aa14.19□□□□□ -0.14
MSH6-214ENST00000616033 RASAL2Q9UJF2 1139 aa14.19□□□□□ -0.14
MSH6-214ENST00000616033 NUP188Q5SRE5 1749 aa14.19□□□□□ -0.14
MSH6-214ENST00000616033 XIRP1Q702N8 1843 aaKnown RBP14.19□□□□□ -0.14
MSH6-214ENST00000616033 SNX3O60493 162 aa14.19□□□□□ -0.14
MSH6-214ENST00000616033 PDE6CP51160 858 aa14.19□□□□□ -0.14
MSH6-214ENST00000616033 EIF3BP55884 814 aaKnown RBP14.19□□□□□ -0.14
MSH6-214ENST00000616033 DRAP1Q14919 205 aaPredicted RBP14.19□□□□□ -0.14
MSH6-214ENST00000616033 PRR16Q569H4 304 aa14.19□□□□□ -0.14
MSH6-214ENST00000616033 GALNT17Q6IS24 598 aa14.19□□□□□ -0.14
MSH6-214ENST00000616033 TRIM74Q86UV6 250 aa14.19□□□□□ -0.14
MSH6-214ENST00000616033 TRIM73Q86UV7 250 aa14.19□□□□□ -0.14
MSH6-214ENST00000616033 LNX1Q8TBB1 728 aaPredicted RBP14.19□□□□□ -0.14
MSH6-214ENST00000616033 TLCD1Q96CP7 247 aa14.19□□□□□ -0.14
MSH6-214ENST00000616033 MTMR9Q96QG7 549 aa14.19□□□□□ -0.14
MSH6-214ENST00000616033 EDEM3Q9BZQ6 932 aa14.19□□□□□ -0.14
MSH6-214ENST00000616033 INTUQ9ULD6 942 aa14.19□□□□□ -0.14
MSH6-214ENST00000616033 HIP1RO75146 1068 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 PCP11498 1178 aaKnown RBP14.18□□□□□ -0.14
MSH6-214ENST00000616033 RAD23BP54727 409 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 RWDD2BP57060 319 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 MTM1Q13496 603 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 KYNUQ16719 465 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 ZC2HC1CQ53FD0 456 aaPredicted RBP14.18□□□□□ -0.14
MSH6-214ENST00000616033 ZFYVE27Q5T4F4 411 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 RBM26Q5T8P6 1007 aaKnown RBP14.18□□□□□ -0.14
MSH6-214ENST00000616033 PRUNE1Q86TP1 453 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 PROM2Q8N271 834 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 TGS1Q96RS0 853 aaKnown RBP14.18□□□□□ -0.14
MSH6-214ENST00000616033 SPOPO43791 374 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 NTSR2O95665 410 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 GHRP10912 638 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 BRAFP15056 766 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 COPS2P61201 443 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 MXRA7P84157 204 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 ZC3H12AQ5D1E8 599 aaKnown RBP14.18□□□□□ -0.14
MSH6-214ENST00000616033 CYP4F22Q6NT55 531 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 EXOC3L1Q86VI1 746 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 NKX1-2Q9UD57 310 aaPredicted RBP14.18□□□□□ -0.14
MSH6-214ENST00000616033 HAO1Q9UJM8 370 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 DNAJC12Q9UKB3 198 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 SLC12A4Q9UP95 1085 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 A0A1W2PRG0 241 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 ERVV-1B6SEH8 477 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 FGRP09769 529 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 DLATP10515 647 aaKnown RBP14.18□□□□□ -0.14
MSH6-214ENST00000616033 MMP13P45452 471 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 RPS8P62241 208 aaKnown RBP14.18□□□□□ -0.14
MSH6-214ENST00000616033 CALCOCO2Q13137 446 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 CTTNQ14247 550 aaKnown RBP14.18□□□□□ -0.14
MSH6-214ENST00000616033 COG2Q14746 738 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 ZCWPW2Q504Y3 356 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 INTS8Q75QN2 995 aaKnown RBP14.18□□□□□ -0.14
MSH6-214ENST00000616033 EPB41L4BQ9H329 900 aa14.18□□□□□ -0.14
MSH6-214ENST00000616033 PPFIA2O75334 1257 aa14.17□□□□□ -0.14
MSH6-214ENST00000616033 MED24O75448 989 aa14.17□□□□□ -0.14
MSH6-214ENST00000616033 CNGA2Q16280 664 aa14.17□□□□□ -0.14
MSH6-214ENST00000616033 C6orf118Q5T5N4 469 aa14.17□□□□□ -0.14
MSH6-214ENST00000616033 TAOK1Q7L7X3 1001 aa14.17□□□□□ -0.14
MSH6-214ENST00000616033 SPOCK2Q92563 424 aa14.17□□□□□ -0.14
MSH6-214ENST00000616033 SYN2Q92777 582 aaPredicted RBP14.17□□□□□ -0.14
MSH6-214ENST00000616033 HOMER3Q9NSC5 361 aa14.17□□□□□ -0.14
MSH6-214ENST00000616033 KLHL14Q9P2G3 628 aa14.17□□□□□ -0.14
MSH6-214ENST00000616033 ALG6Q9Y672 507 aa14.17□□□□□ -0.14
MSH6-214ENST00000616033 WDR91A4D1P6 747 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms