RNA–Protein interactions for RNA: ENST00000615513.4

CDKN1A-208, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKN1A, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-208ENST00000615513 HOMER2Q9NSB8 354 aa16.06■□□□□ 0.16
CDKN1A-208ENST00000615513 ANKEF1Q9NU02 776 aa16.06■□□□□ 0.16
CDKN1A-208ENST00000615513 SMARCAL1Q9NZC9 954 aa16.06■□□□□ 0.16
CDKN1A-208ENST00000615513 VPS18Q9P253 973 aa16.06■□□□□ 0.16
CDKN1A-208ENST00000615513 ASTN2O75129 1339 aaPredicted RBP16.05■□□□□ 0.16
CDKN1A-208ENST00000615513 ZC3H4Q9UPT8 1303 aaKnown RBP16.05■□□□□ 0.16
CDKN1A-208ENST00000615513 WDR64B1ANS9 1081 aa16.05■□□□□ 0.16
CDKN1A-208ENST00000615513 KIF4AO95239 1232 aa16.05■□□□□ 0.16
CDKN1A-208ENST00000615513 TRIM49P0CI25 452 aa16.05■□□□□ 0.16
CDKN1A-208ENST00000615513 TRIM49CP0CI26 452 aa16.05■□□□□ 0.16
CDKN1A-208ENST00000615513 EPHB4P54760 987 aa16.05■□□□□ 0.16
CDKN1A-208ENST00000615513 PSMC5P62195 406 aa16.05■□□□□ 0.16
CDKN1A-208ENST00000615513 EMBQ6PCB8 327 aa16.05■□□□□ 0.16
CDKN1A-208ENST00000615513 SLFN11Q7Z7L1 901 aa16.05■□□□□ 0.16
CDKN1A-208ENST00000615513 TPCN2Q8NHX9 752 aa16.05■□□□□ 0.16
CDKN1A-208ENST00000615513 CCDC43Q96MW1 224 aaKnown RBP16.05■□□□□ 0.16
CDKN1A-208ENST00000615513 SYT11Q9BT88 431 aa16.05■□□□□ 0.16
CDKN1A-208ENST00000615513 SCAF8Q9UPN6 1271 aaKnown RBP16.05■□□□□ 0.16
CDKN1A-208ENST00000615513 VWA5AO00534 786 aa16.04■□□□□ 0.16
CDKN1A-208ENST00000615513 NOP2P46087 812 aaKnown RBP16.04■□□□□ 0.16
CDKN1A-208ENST00000615513 CETN1Q12798 172 aa16.04■□□□□ 0.16
CDKN1A-208ENST00000615513 SPP2Q13103 211 aa16.04■□□□□ 0.16
CDKN1A-208ENST00000615513 SYCE1Q8N0S2 351 aa16.04■□□□□ 0.16
CDKN1A-208ENST00000615513 OLIG1Q8TAK6 271 aa16.04■□□□□ 0.16
CDKN1A-208ENST00000615513 GPR88Q9GZN0 384 aa16.04■□□□□ 0.16
CDKN1A-208ENST00000615513 TCEAL9Q9UHQ7 104 aa16.04■□□□□ 0.16
CDKN1A-208ENST00000615513 MYH11P35749 1972 aa16.04■□□□□ 0.16
CDKN1A-208ENST00000615513 MAFGO15525 162 aa16.04■□□□□ 0.16
CDKN1A-208ENST00000615513 BACE1P56817 501 aa16.04■□□□□ 0.16
CDKN1A-208ENST00000615513 MCCD1P59942 119 aaPredicted RBP16.04■□□□□ 0.16
CDKN1A-208ENST00000615513 DGKZQ13574 1117 aa16.04■□□□□ 0.16
CDKN1A-208ENST00000615513 ARHGEF16Q5VV41 709 aa16.04■□□□□ 0.16
CDKN1A-208ENST00000615513 MICALL2Q8IY33 904 aa16.04■□□□□ 0.16
CDKN1A-208ENST00000615513 LMO3Q8TAP4 145 aa16.04■□□□□ 0.16
CDKN1A-208ENST00000615513 AS3MTQ9HBK9 375 aa16.04■□□□□ 0.16
CDKN1A-208ENST00000615513 HACL1Q9UJ83 578 aa16.04■□□□□ 0.16
CDKN1A-208ENST00000615513 ZNF112Q9UJU3 913 aa16.04■□□□□ 0.16
CDKN1A-208ENST00000615513 FAN1Q9Y2M0 1017 aa16.04■□□□□ 0.16
CDKN1A-208ENST00000615513 PMM2O15305 246 aa16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 CLSTN1O94985 981 aa16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 MYCLP12524 364 aaPredicted RBP16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 VAMP7P51809 220 aa16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 OAZ1P54368 228 aa16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 NCKAP1LP55160 1127 aa16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 NNTQ13423 1086 aa16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 MAEAQ7L5Y9 396 aa16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 HAUS6Q7Z4H7 955 aa16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 IFT20Q8IY31 132 aa16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 GSPT2Q8IYD1 628 aaKnown RBP16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 SCYL3Q8IZE3 742 aa16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 USP38Q8NB14 1042 aa16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 XXYLT1Q8NBI6 393 aa16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 LNX1Q8TBB1 728 aaPredicted RBP16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 ACTRT1Q8TDG2 376 aa16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 U2AF1L4Q8WU68 220 aaKnown RBP16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 CAVIN3Q969G5 261 aa16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 SENP7Q9BQF6 1050 aa16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 TMEM59LQ9UK28 342 aa16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 PACSIN2Q9UNF0 486 aaPredicted RBP16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 LTBP3Q9NS15 1303 aa16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 SYF2O95926 243 aaKnown RBP16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 GMPSP49915 693 aaPredicted RBP16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 TNNC1P63316 161 aa16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 SLC7A5Q01650 507 aa16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 PLS1Q14651 629 aa16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 KIF22Q14807 665 aa16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 ZNF746Q6NUN9 644 aaPredicted RBP16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 GPRASP2Q96D09 838 aa16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 HVCN1Q96D96 273 aa16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 GDF3Q9NR23 364 aa16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 SUCLA2Q9P2R7 463 aaPredicted RBP16.03■□□□□ 0.16
CDKN1A-208ENST00000615513 NCANO14594 1321 aa16.02■□□□□ 0.16
CDKN1A-208ENST00000615513 KCNK3O14649 394 aa16.02■□□□□ 0.16
CDKN1A-208ENST00000615513 BACH1O14867 736 aa16.02■□□□□ 0.16
CDKN1A-208ENST00000615513 ATP9AO75110 1047 aa16.02■□□□□ 0.16
CDKN1A-208ENST00000615513 TMEM253P0C7T8 217 aa16.02■□□□□ 0.16
CDKN1A-208ENST00000615513 CCND2P30279 289 aa16.02■□□□□ 0.16
CDKN1A-208ENST00000615513 GALCP54803 685 aa16.02■□□□□ 0.16
CDKN1A-208ENST00000615513 UGCGQ16739 394 aa16.02■□□□□ 0.16
CDKN1A-208ENST00000615513 NBPF12Q5TAG4 269 aaPredicted RBP16.02■□□□□ 0.16
CDKN1A-208ENST00000615513 NSMFQ6X4W1 530 aa16.02■□□□□ 0.16
CDKN1A-208ENST00000615513 VSIG10LQ86VR7 867 aa16.02■□□□□ 0.16
CDKN1A-208ENST00000615513 RDH13Q8NBN7 331 aa16.02■□□□□ 0.16
CDKN1A-208ENST00000615513 ATG4CQ96DT6 458 aa16.02■□□□□ 0.16
CDKN1A-208ENST00000615513 CALR3Q96L12 384 aaKnown RBP16.02■□□□□ 0.16
CDKN1A-208ENST00000615513 C12orf42Q96LP6 360 aa16.02■□□□□ 0.16
CDKN1A-208ENST00000615513 MAF1Q9H063 256 aa16.02■□□□□ 0.16
CDKN1A-208ENST00000615513 RNF146Q9NTX7 359 aa16.02■□□□□ 0.16
CDKN1A-208ENST00000615513 HSPBP1Q9NZL4 362 aa16.02■□□□□ 0.16
CDKN1A-208ENST00000615513 CNOT7Q9UIV1 285 aaKnown RBP16.02■□□□□ 0.16
CDKN1A-208ENST00000615513 EXOC7Q9UPT5 735 aa16.02■□□□□ 0.16
CDKN1A-208ENST00000615513 USP20Q9Y2K6 914 aa16.02■□□□□ 0.16
CDKN1A-208ENST00000615513 EMSYQ7Z589 1322 aa16.02■□□□□ 0.15
CDKN1A-208ENST00000615513 CCNE2O96020 404 aa16.01■□□□□ 0.15
CDKN1A-208ENST00000615513 GYS2P54840 703 aa16.01■□□□□ 0.15
CDKN1A-208ENST00000615513 HNRNPH2P55795 449 aaKnown RBP16.01■□□□□ 0.15
CDKN1A-208ENST00000615513 PHLDB3Q6NSJ2 640 aa16.01■□□□□ 0.15
CDKN1A-208ENST00000615513 SND1Q7KZF4 910 aaKnown RBP eCLIP16.01■□□□□ 0.15
CDKN1A-208ENST00000615513 SAMD7Q7Z3H4 446 aa16.01■□□□□ 0.15
CDKN1A-208ENST00000615513 NLRX1Q86UT6 975 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms