RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 PABPC4Q13310 644 aaKnown RBP eCLIP11.81□□□□□ -0.522e-14■■■■□ 19.8
SENP3-EIF4A1-201ENST00000614237 NBPF9Q3BBW0 867 aa11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 CLEC4DQ8WXI8 215 aa11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 OSBPL9Q96SU4 736 aa11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 BHMT2Q9H2M3 363 aa11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 PARVGQ9HBI0 331 aa11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 P4HA2O15460 535 aa11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 EPB41P11171 864 aaKnown RBP11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 LLGL1Q15334 1064 aa11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 TTMPQ5BVD1 217 aa11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 MEI1Q5TIA1 1274 aa11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 DDX42Q86XP3 938 aaKnown RBP eCLIP11.81□□□□□ -0.521e-6■■■□□ 15.1
SENP3-EIF4A1-201ENST00000614237 CYP2W1Q8TAV3 490 aa11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.81□□□□□ -0.524e-8■■■■■ 50.8
SENP3-EIF4A1-201ENST00000614237 ZIM3Q96PE6 472 aa11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 KRT12Q99456 494 aa11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 SENP7Q9BQF6 1050 aa11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 LTBP3Q9NS15 1303 aa11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 DHX15O43143 795 aaKnown RBP11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 TBCAO75347 108 aaKnown RBP11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 AKAP3O75969 853 aa11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 MYBP10242 640 aa11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 XRCC5P13010 732 aaKnown RBP11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 UCHL3P15374 230 aa11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 ZNF76P36508 570 aa11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 LDHDQ86WU2 507 aa11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 RDM1Q8NG50 284 aa11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 SYT11Q9BT88 431 aa11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 TEKT3Q9BXF9 490 aa11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 TLR10Q9BXR5 811 aa11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 HAUS2Q9NVX0 235 aa11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 SMCHD1A6NHR9 2005 aa11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 BUB1BO60566 1050 aaPredicted RBP11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 ZBTB48P10074 688 aaPredicted RBP11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 PSMC2P35998 433 aaKnown RBP11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 MKRN4PQ13434 485 aaPredicted RBP11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 RASA3Q14644 834 aa11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 ASIC2Q16515 512 aa11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 CCDC121Q6ZUS5 278 aa11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 SLFN11Q7Z7L1 901 aa11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 TEPSINQ96N21 525 aa11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 ZHX3Q9H4I2 956 aa11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 TMEM59LQ9UK28 342 aa11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 ZC3H4Q9UPT8 1303 aaKnown RBP11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 TCP10L2B9ZVM9 353 aa11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 HOXA13P31271 388 aaPredicted RBP11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 POLR2FP61218 127 aaKnown RBP11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 NAA35Q5VZE5 725 aa11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 SLC30A5Q8TAD4 765 aa11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 OLIG1Q8TAK6 271 aa11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 DYDC2Q96IM9 177 aa11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 UNC45AQ9H3U1 944 aa11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 RBM12Q9NTZ6 932 aaKnown RBP11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 SALL4Q9UJQ4 1053 aa11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 PCDHB13Q9Y5F0 798 aa11.8□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 PFASO15067 1338 aa11.79□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 OPA1O60313 960 aa11.79□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 GFPT1Q06210 699 aaPredicted RBP11.79□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 EXOC3L4Q17RC7 722 aa11.79□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 MAEAQ7L5Y9 396 aa11.79□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 NELFCDQ8IXH7 590 aa11.79□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 AENQ8WTP8 325 aaKnown RBP11.79□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 UBLCP1Q8WVY7 318 aaPredicted RBP11.79□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 SLC38A10Q9HBR0 1119 aa11.79□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 CTNND1O60716 968 aaKnown RBP11.79□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 GAS7O60861 476 aa11.79□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 HEXIM1O94992 359 aaKnown RBP11.79□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 SNAP25P60880 206 aa11.79□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 MAPK7Q13164 816 aa11.79□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 IFI16Q16666 785 aaKnown RBP11.79□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 TCP11Q8WWU5 503 aa11.79□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 LBHD1Q9BQE6 289 aaPredicted RBP11.79□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 YY1AP1Q9H869 796 aa11.79□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 ZNF112Q9UJU3 913 aa11.79□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 MYH11P35749 1972 aa11.79□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 GOLGA6L10A6NI86 522 aa11.78□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 P4HBP07237 508 aaKnown RBP11.78□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 IKQ13123 557 aaPredicted RBP11.78□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 LARGE2Q8N3Y3 721 aa11.78□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 SPATA4Q8NEY3 305 aa11.78□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 HVCN1Q96D96 273 aa11.78□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 THOC1Q96FV9 657 aaKnown RBP11.78□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 ZNF577Q9BSK1 485 aa11.78□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 TBC1D22BQ9NU19 505 aa11.78□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 TBC1D7Q9P0N9 293 aa11.78□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 ARID2Q68CP9 1835 aa11.78□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 CLTAP09496 248 aa11.78□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 FERP16591 822 aa11.78□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 OAZ1P54368 228 aa11.78□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 HADHBP55084 474 aaKnown RBP11.78□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 NIM1KQ8IY84 436 aa11.78□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 CAVIN3Q969G5 261 aa11.78□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 STK33Q9BYT3 514 aa11.78□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 AGO4Q9HCK5 861 aaKnown RBP11.78□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 RGL1Q9NZL6 768 aa11.78□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 PAPPA2Q9BXP8 1791 aa11.78□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 TMCO5BA8MYB1 307 aa11.78□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 IPO5O00410 1097 aaKnown RBP11.78□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 WNT10BO00744 389 aa11.78□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 KLHL30Q0D2K2 578 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms