RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 TYW1Q9NV66 732 aaKnown RBP22.3■■□□□ 1.16
CPNE9-205ENST00000613455 ARHGAP28Q9P2N2 729 aa22.3■■□□□ 1.16
CPNE9-205ENST00000613455 TRAF3IP3Q9Y228 551 aa22.3■■□□□ 1.16
CPNE9-205ENST00000613455 FRMPD3Q5JV73 1810 aa22.3■■□□□ 1.16
CPNE9-205ENST00000613455 TGFB1I1O43294 461 aa22.29■■□□□ 1.16
CPNE9-205ENST00000613455 PSEN2P49810 448 aa22.29■■□□□ 1.16
CPNE9-205ENST00000613455 GNASQ5JWF2 1037 aa22.29■■□□□ 1.16
CPNE9-205ENST00000613455 MARCH8Q5T0T0 291 aa22.29■■□□□ 1.16
CPNE9-205ENST00000613455 PPP4R3CPQ6ZMV5 832 aa22.29■■□□□ 1.16
CPNE9-205ENST00000613455 ZC3H3Q8IXZ2 948 aaKnown RBP22.29■■□□□ 1.16
CPNE9-205ENST00000613455 NOC3LQ8WTT2 800 aaKnown RBP22.29■■□□□ 1.16
CPNE9-205ENST00000613455 TCP11Q8WWU5 503 aa22.29■■□□□ 1.16
CPNE9-205ENST00000613455 ANP32BQ92688 251 aaKnown RBP22.29■■□□□ 1.16
CPNE9-205ENST00000613455 SPC25Q9HBM1 224 aa22.29■■□□□ 1.16
CPNE9-205ENST00000613455 DDX20Q9UHI6 824 aaKnown RBP22.29■■□□□ 1.16
CPNE9-205ENST00000613455 PDXKO00764 312 aa22.28■■□□□ 1.16
CPNE9-205ENST00000613455 SMIM10L2AP0DMW4 78 aa22.28■■□□□ 1.16
CPNE9-205ENST00000613455 SMIM10L2BP0DMW5 78 aa22.28■■□□□ 1.16
CPNE9-205ENST00000613455 KLRC1P26715 233 aa22.28■■□□□ 1.16
CPNE9-205ENST00000613455 NAMPTP43490 491 aa22.28■■□□□ 1.16
CPNE9-205ENST00000613455 CLCN3P51790 818 aa22.28■■□□□ 1.16
CPNE9-205ENST00000613455 CAPSQ13938 189 aa22.28■■□□□ 1.16
CPNE9-205ENST00000613455 PPP2R5AQ15172 486 aa22.28■■□□□ 1.16
CPNE9-205ENST00000613455 EDRF1Q3B7T1 1238 aa22.28■■□□□ 1.16
CPNE9-205ENST00000613455 EFCAB12Q6NXP0 572 aa22.28■■□□□ 1.16
CPNE9-205ENST00000613455 APTXQ7Z2E3 356 aaKnown RBP22.28■■□□□ 1.16
CPNE9-205ENST00000613455 KLHDC9Q8NEP7 349 aa22.28■■□□□ 1.16
CPNE9-205ENST00000613455 PRPF31Q8WWY3 499 aaKnown RBP22.28■■□□□ 1.16
CPNE9-205ENST00000613455 TRIM5Q9C035 493 aa22.28■■□□□ 1.16
CPNE9-205ENST00000613455 MAGEB2O15479 319 aa22.28■■□□□ 1.16
CPNE9-205ENST00000613455 KPNA6O60684 536 aa22.28■■□□□ 1.16
CPNE9-205ENST00000613455 ZNF75DP51815 510 aa22.28■■□□□ 1.16
CPNE9-205ENST00000613455 MTHFD1LQ6UB35 978 aa22.28■■□□□ 1.16
CPNE9-205ENST00000613455 PPP1R13LQ8WUF5 828 aa22.28■■□□□ 1.16
CPNE9-205ENST00000613455 LMBR1Q8WVP7 490 aa22.28■■□□□ 1.16
CPNE9-205ENST00000613455 PSPC1Q8WXF1 523 aaKnown RBP22.28■■□□□ 1.16
CPNE9-205ENST00000613455 KCNN1Q92952 543 aa22.28■■□□□ 1.16
CPNE9-205ENST00000613455 PDLIM2Q96JY6 352 aa22.28■■□□□ 1.16
CPNE9-205ENST00000613455 KATNAL1Q9BW62 490 aa22.28■■□□□ 1.16
CPNE9-205ENST00000613455 DENND3A2RUS2 1198 aa22.27■■□□□ 1.16
CPNE9-205ENST00000613455 KCNJ18B7U540 433 aa22.27■■□□□ 1.16
CPNE9-205ENST00000613455 CDK11BP21127 795 aaKnown RBP22.27■■□□□ 1.16
CPNE9-205ENST00000613455 CST5P28325 142 aaPredicted RBP22.27■■□□□ 1.16
CPNE9-205ENST00000613455 FKBP3Q00688 224 aaKnown RBP22.27■■□□□ 1.16
CPNE9-205ENST00000613455 KCNJ12Q14500 433 aa22.27■■□□□ 1.16
CPNE9-205ENST00000613455 TCP11X2Q5H9J9 407 aa22.27■■□□□ 1.16
CPNE9-205ENST00000613455 TAS1R3Q7RTX0 852 aa22.27■■□□□ 1.16
CPNE9-205ENST00000613455 METTL13Q8N6R0 699 aa22.27■■□□□ 1.16
CPNE9-205ENST00000613455 RETREG2Q8NC44 543 aa22.27■■□□□ 1.16
CPNE9-205ENST00000613455 HVCN1Q96D96 273 aa22.27■■□□□ 1.16
CPNE9-205ENST00000613455 SETD4Q9NVD3 440 aa22.27■■□□□ 1.16
CPNE9-205ENST00000613455 IFNKQ9P0W0 207 aa22.27■■□□□ 1.16
CPNE9-205ENST00000613455 TBX20Q9UMR3 447 aa22.27■■□□□ 1.16
CPNE9-205ENST00000613455 CHMP4BP1P59074 171 aa22.26■■□□□ 1.15
CPNE9-205ENST00000613455 LAMTOR4Q0VGL1 99 aa22.26■■□□□ 1.15
CPNE9-205ENST00000613455 CCSAPQ6IQ19 270 aaPredicted RBP22.26■■□□□ 1.15
CPNE9-205ENST00000613455 MAP4K3Q8IVH8 894 aa22.26■■□□□ 1.15
CPNE9-205ENST00000613455 ACCSQ96QU6 501 aa22.26■■□□□ 1.15
CPNE9-205ENST00000613455 GBP3Q9H0R5 595 aa22.26■■□□□ 1.15
CPNE9-205ENST00000613455 SUCLA2Q9P2R7 463 aaPredicted RBP22.26■■□□□ 1.15
CPNE9-205ENST00000613455 KCNG1Q9UIX4 513 aa22.26■■□□□ 1.15
CPNE9-205ENST00000613455 PTPN22Q9Y2R2 807 aa22.26■■□□□ 1.15
CPNE9-205ENST00000613455 NRCAMQ92823 1304 aa22.26■■□□□ 1.15
CPNE9-205ENST00000613455 BRCA2P51587 3418 aa22.26■■□□□ 1.15
CPNE9-205ENST00000613455 RRN3P2A6NIE6 340 aa22.26■■□□□ 1.15
CPNE9-205ENST00000613455 LRRIQ4A6NIV6 560 aa22.26■■□□□ 1.15
CPNE9-205ENST00000613455 CALUO43852 315 aaPredicted RBP22.26■■□□□ 1.15
CPNE9-205ENST00000613455 SERPINC1P01008 464 aa22.26■■□□□ 1.15
CPNE9-205ENST00000613455 GJB1P08034 283 aa22.26■■□□□ 1.15
CPNE9-205ENST00000613455 HIC1Q14526 733 aa22.26■■□□□ 1.15
CPNE9-205ENST00000613455 MXD4Q14582 209 aaPredicted RBP22.26■■□□□ 1.15
CPNE9-205ENST00000613455 KRT31Q15323 416 aa22.26■■□□□ 1.15
CPNE9-205ENST00000613455 CXCL17Q6UXB2 119 aa22.26■■□□□ 1.15
CPNE9-205ENST00000613455 MTG1Q9BT17 334 aaPredicted RBP22.26■■□□□ 1.15
CPNE9-205ENST00000613455 XPO4Q9C0E2 1151 aaKnown RBP22.26■■□□□ 1.15
CPNE9-205ENST00000613455 TMEM206Q9H813 350 aa22.26■■□□□ 1.15
CPNE9-205ENST00000613455 LIMA1Q9UHB6 759 aaKnown RBP22.26■■□□□ 1.15
CPNE9-205ENST00000613455 TRIP12Q14669 1992 aaPredicted RBP22.25■■□□□ 1.15
CPNE9-205ENST00000613455 H0YCG3 227 aa22.25■■□□□ 1.15
CPNE9-205ENST00000613455 ADAM17P78536 824 aa22.25■■□□□ 1.15
CPNE9-205ENST00000613455 SPAG1Q07617 926 aa22.25■■□□□ 1.15
CPNE9-205ENST00000613455 NFIL3Q16649 462 aa22.25■■□□□ 1.15
CPNE9-205ENST00000613455 DEPTORQ8TB45 409 aa22.25■■□□□ 1.15
CPNE9-205ENST00000613455 SH3TC2Q8TF17 1288 aa22.25■■□□□ 1.15
CPNE9-205ENST00000613455 CNOT6LQ96LI5 555 aaKnown RBP22.25■■□□□ 1.15
CPNE9-205ENST00000613455 CEP63Q96MT8 703 aa22.25■■□□□ 1.15
CPNE9-205ENST00000613455 NAP1L5Q96NT1 182 aaPredicted RBP22.25■■□□□ 1.15
CPNE9-205ENST00000613455 HMX1Q9NP08 348 aaPredicted RBP22.25■■□□□ 1.15
CPNE9-205ENST00000613455 AGPAT3Q9NRZ7 376 aa22.25■■□□□ 1.15
CPNE9-205ENST00000613455 INTS13Q9NVM9 706 aa22.25■■□□□ 1.15
CPNE9-205ENST00000613455 MBLAC1A4D2B0 266 aaPredicted RBP22.24■■□□□ 1.15
CPNE9-205ENST00000613455 ZEB2O60315 1214 aa22.24■■□□□ 1.15
CPNE9-205ENST00000613455 FGFR1OPO95684 399 aaKnown RBP22.24■■□□□ 1.15
CPNE9-205ENST00000613455 NR3C1P04150 777 aa22.24■■□□□ 1.15
CPNE9-205ENST00000613455 NR2F2P24468 414 aa22.24■■□□□ 1.15
CPNE9-205ENST00000613455 EEF1GP26641 437 aaKnown RBP22.24■■□□□ 1.15
CPNE9-205ENST00000613455 HOXC8P31273 242 aa22.24■■□□□ 1.15
CPNE9-205ENST00000613455 DNM2P50570 870 aa22.24■■□□□ 1.15
CPNE9-205ENST00000613455 UBASH3AP57075 661 aa22.24■■□□□ 1.15
CPNE9-205ENST00000613455 CCDC173Q0VFZ6 552 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms