RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 SLC9A2Q9UBY0 812 aa9.38□□□□□ -0.91
PDE6A-204ENST00000613228 PCDHB4Q9Y5E5 795 aa9.38□□□□□ -0.91
PDE6A-204ENST00000613228 USH1CQ9Y6N9 552 aa9.38□□□□□ -0.91
PDE6A-204ENST00000613228 ATP8B3O60423 1300 aa9.38□□□□□ -0.91
PDE6A-204ENST00000613228 DLATP10515 647 aaKnown RBP9.38□□□□□ -0.91
PDE6A-204ENST00000613228 DDR1Q08345 913 aa9.38□□□□□ -0.91
PDE6A-204ENST00000613228 MTERF2Q49AM1 385 aa9.38□□□□□ -0.91
PDE6A-204ENST00000613228 NIPA1Q7RTP0 329 aa9.38□□□□□ -0.91
PDE6A-204ENST00000613228 ITFG2Q969R8 447 aa9.38□□□□□ -0.91
PDE6A-204ENST00000613228 C17orf75Q9HAS0 396 aa9.38□□□□□ -0.91
PDE6A-204ENST00000613228 RNF181Q9P0P0 153 aa9.38□□□□□ -0.91
PDE6A-204ENST00000613228 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.38□□□□□ -0.91
PDE6A-204ENST00000613228 CIB2O75838 187 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 CLTAP09496 248 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 OAZ1P54368 228 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 ST3GAL1Q11201 340 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 SPP2Q13103 211 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 MTMR2Q13614 643 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 NT5DC1Q5TFE4 455 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 TEX9Q8N6V9 391 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 ST7Q9NRC1 585 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 ANKFY1Q9P2R3 1169 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 MIF4GDA9UHW6 222 aaKnown RBP9.37□□□□□ -0.91
PDE6A-204ENST00000613228 FCER1AP12319 257 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 ALDH3A1P30838 453 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 MYO1EQ12965 1108 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 PDXDC1Q6P996 788 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 DPH6Q7L8W6 267 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 MKL1Q969V6 931 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 MSTO1Q9BUK6 570 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 CPVLQ9H3G5 476 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 SUGCTQ9HAC7 445 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 PASKQ96RG2 1323 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 CLIC2O15247 247 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 GMPSP49915 693 aaPredicted RBP9.37□□□□□ -0.91
PDE6A-204ENST00000613228 CACNB1Q02641 598 aaPredicted RBP9.37□□□□□ -0.91
PDE6A-204ENST00000613228 TRIM72Q6ZMU5 477 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 SND1Q7KZF4 910 aaKnown RBP eCLIP9.37□□□□□ -0.91
PDE6A-204ENST00000613228 CCDC105Q8IYK2 499 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 RPF1Q9H9Y2 349 aaKnown RBP9.37□□□□□ -0.91
PDE6A-204ENST00000613228 FAM196BA6NMK8 535 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 K7ERI5 159 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 PGRMC1O00264 195 aaKnown RBP9.37□□□□□ -0.91
PDE6A-204ENST00000613228 FAM133AQ8N9E0 248 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 FUCA2Q9BTY2 467 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 KIF9Q9HAQ2 790 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 UBE2TQ9NPD8 197 aaPredicted RBP9.37□□□□□ -0.91
PDE6A-204ENST00000613228 AKT3Q9Y243 479 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 POTEFA5A3E0 1075 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 ENO4A6NNW6 628 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 TBC1D12O60347 775 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 DGAT1O75907 488 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 POTEIP0CG38 1075 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 PLS3P13797 630 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 SHMT1P34896 483 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 TMED1Q13445 227 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 XKR3Q5GH77 459 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 DACT2Q5SW24 774 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 PHLDB3Q6NSJ2 640 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 POTEGQ6S5H5 508 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 POTEEQ6S8J3 1075 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 CENPKQ9BS16 269 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 JPH1Q9HDC5 661 aaPredicted RBP9.37□□□□□ -0.91
PDE6A-204ENST00000613228 NKIRAS1Q9NYS0 192 aa9.37□□□□□ -0.91
PDE6A-204ENST00000613228 VIMP08670 466 aaKnown RBP9.36□□□□□ -0.91
PDE6A-204ENST00000613228 RASSF2P50749 326 aa9.36□□□□□ -0.91
PDE6A-204ENST00000613228 KCNH2Q12809 1159 aa9.36□□□□□ -0.91
PDE6A-204ENST00000613228 LGSNQ5TDP6 509 aa9.36□□□□□ -0.91
PDE6A-204ENST00000613228 CCDC127Q96BQ5 260 aa9.36□□□□□ -0.91
PDE6A-204ENST00000613228 GAS2O43903 313 aaKnown RBP9.36□□□□□ -0.91
PDE6A-204ENST00000613228 YWHABP31946 246 aaKnown RBP9.36□□□□□ -0.91
PDE6A-204ENST00000613228 EPHB4P54760 987 aa9.36□□□□□ -0.91
PDE6A-204ENST00000613228 SNAPC2Q13487 334 aa9.36□□□□□ -0.91
PDE6A-204ENST00000613228 ZNF746Q6NUN9 644 aaPredicted RBP9.36□□□□□ -0.91
PDE6A-204ENST00000613228 MAP7D3Q8IWC1 876 aa9.36□□□□□ -0.91
PDE6A-204ENST00000613228 GPD1LQ8N335 351 aa9.36□□□□□ -0.91
PDE6A-204ENST00000613228 SMC1BQ8NDV3 1235 aa9.36□□□□□ -0.91
PDE6A-204ENST00000613228 SSU72P8A0A1W2PR75 194 aa9.36□□□□□ -0.91
PDE6A-204ENST00000613228 TRIM49BA6NDI0 452 aa9.36□□□□□ -0.91
PDE6A-204ENST00000613228 PPP1R3GB7ZBB8 358 aa9.36□□□□□ -0.91
PDE6A-204ENST00000613228 CCDC188H7C350 402 aa9.36□□□□□ -0.91
PDE6A-204ENST00000613228 BUB1O43683 1085 aa9.36□□□□□ -0.91
PDE6A-204ENST00000613228 MAPTP10636 758 aaKnown RBP9.36□□□□□ -0.91
PDE6A-204ENST00000613228 VAMP7P51809 220 aa9.36□□□□□ -0.91
PDE6A-204ENST00000613228 PEX3P56589 373 aa9.36□□□□□ -0.91
PDE6A-204ENST00000613228 ADCY2Q08462 1091 aa9.36□□□□□ -0.91
PDE6A-204ENST00000613228 CASP8Q14790 479 aa9.36□□□□□ -0.91
PDE6A-204ENST00000613228 TXNRD3Q86VQ6 643 aa9.36□□□□□ -0.91
PDE6A-204ENST00000613228 KLHL7Q8IXQ5 586 aa9.36□□□□□ -0.91
PDE6A-204ENST00000613228 INTS2Q9H0H0 1204 aaKnown RBP9.36□□□□□ -0.91
PDE6A-204ENST00000613228 RMI1Q9H9A7 625 aa9.36□□□□□ -0.91
PDE6A-204ENST00000613228 ASIC3Q9UHC3 531 aa9.36□□□□□ -0.91
PDE6A-204ENST00000613228 TPP2P29144 1249 aaPredicted RBP9.36□□□□□ -0.91
PDE6A-204ENST00000613228 PHBP35232 272 aa9.36□□□□□ -0.91
PDE6A-204ENST00000613228 TOB1P50616 345 aaPredicted RBP9.36□□□□□ -0.91
PDE6A-204ENST00000613228 ACTN3Q08043 901 aaPredicted RBP9.36□□□□□ -0.91
PDE6A-204ENST00000613228 ANKRD40Q6AI12 368 aa9.36□□□□□ -0.91
PDE6A-204ENST00000613228 ARHGAP24Q8N264 748 aa9.36□□□□□ -0.91
PDE6A-204ENST00000613228 GFM2Q969S9 779 aaKnown RBP9.36□□□□□ -0.91
PDE6A-204ENST00000613228 MRPL4Q9BYD3 311 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms