RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 POU5F1Q01860 360 aaKnown RBP12.91□□□□□ -0.34
TP53-220ENST00000610623 GNPTABQ3T906 1256 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 LRRC55Q6ZSA7 311 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 APBB1IPQ7Z5R6 666 aaPredicted RBP12.91□□□□□ -0.34
TP53-220ENST00000610623 TSG101Q99816 390 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 PACSIN1Q9BY11 444 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 EPB41L4BQ9H329 900 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 RIC8AQ9NPQ8 531 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 IRAK4Q9NWZ3 460 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 SUCLA2Q9P2R7 463 aaPredicted RBP12.91□□□□□ -0.34
TP53-220ENST00000610623 CTNNAL1Q9UBT7 734 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 GGA1Q9UJY5 639 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 TTC7AQ9ULT0 858 aaPredicted RBP12.91□□□□□ -0.34
TP53-220ENST00000610623 SH3BP1Q9Y3L3 701 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 ASB3Q9Y575 518 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 ROBO3Q96MS0 1386 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 ADAMTS3O15072 1205 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 MAP3K7O43318 606 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 GJB6O95452 261 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 CCNB1P14635 433 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 GNAZP19086 355 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 POLR2FP61218 127 aaKnown RBP12.9□□□□□ -0.34
TP53-220ENST00000610623 GPSM2P81274 684 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 ANO7Q6IWH7 933 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 TBC1D16Q8TBP0 767 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 FBF1Q8TES7 1133 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 DPH5Q9H2P9 285 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 RGL1Q9NZL6 768 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 STK38LQ9Y2H1 464 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 ARL2BPQ9Y2Y0 163 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 LTBP1Q14766 1721 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 A8MUI8 341 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 M0R2N6 131 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 SHBGP04278 402 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 ITGA4P13612 1032 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 ATP6V1C1P21283 382 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 RFX1P22670 979 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 EN1Q05925 392 aaPredicted RBP12.9□□□□□ -0.34
TP53-220ENST00000610623 PLS1Q14651 629 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 DIXDC1Q155Q3 683 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 CNGA2Q16280 664 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 ZC3H12AQ5D1E8 599 aaKnown RBP12.9□□□□□ -0.34
TP53-220ENST00000610623 TNFAIP8L3Q5GJ75 292 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 GALNT17Q6IS24 598 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 UNC13DQ70J99 1090 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 SLFN11Q7Z7L1 901 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 METTL3Q86U44 580 aaKnown RBP12.9□□□□□ -0.34
TP53-220ENST00000610623 SYCE1Q8N0S2 351 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 ATP8B4Q8TF62 1192 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 TEKT4Q8WW24 435 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 MTFR1LQ9H019 292 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 ZDHHC18Q9NUE0 388 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 BZW2Q9Y6E2 419 aaKnown RBP12.9□□□□□ -0.34
TP53-220ENST00000610623 MYH4Q9Y623 1939 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 NRXN2Q9P2S2 1712 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 FAM205AQ6ZU69 1335 aa12.9□□□□□ -0.34
TP53-220ENST00000610623 CDK5RAP2Q96SN8 1893 aa12.9□□□□□ -0.35
TP53-220ENST00000610623 KLRG2A4D1S0 409 aaPredicted RBP12.89□□□□□ -0.35
TP53-220ENST00000610623 UFL1O94874 794 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 IL1R1P14778 569 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 DRG2P55039 364 aaKnown RBP12.89□□□□□ -0.35
TP53-220ENST00000610623 ASIC2Q16515 512 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 DUPD1Q68J44 220 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 PEX26Q7Z412 305 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 RPUSD2Q8IZ73 545 aaKnown RBP12.89□□□□□ -0.35
TP53-220ENST00000610623 KIF2BQ8N4N8 673 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 AZI2Q9H6S1 392 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 IGSF5Q9NSI5 407 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 LIMD1Q9UGP4 676 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 TLDC2A0PJX2 215 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 FAM187AA6NFU0 413 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 CALB2P22676 271 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 ALDH3A1P30838 453 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 IFI35P80217 286 aaPredicted RBP12.89□□□□□ -0.35
TP53-220ENST00000610623 PSMD2Q13200 908 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 LAMB3Q13751 1172 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 RAPGEF1Q13905 1077 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 TXNRD1Q16881 649 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 PARP6Q2NL67 630 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 C12orf60Q5U649 245 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 SV2BQ7L1I2 683 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 TPCN2Q8NHX9 752 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 ERP44Q9BS26 406 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 LSM14BQ9BX40 385 aaKnown RBP12.89□□□□□ -0.35
TP53-220ENST00000610623 CELF4Q9BZC1 486 aaKnown RBP12.89□□□□□ -0.35
TP53-220ENST00000610623 RNPEPL1Q9HAU8 725 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 ARHGEF10LQ9HCE6 1279 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 MCM9Q9NXL9 1143 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 STXBP5LQ9Y2K9 1186 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 DIS3Q9Y2L1 958 aaKnown RBP12.89□□□□□ -0.35
TP53-220ENST00000610623 CD2APQ9Y5K6 639 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 COL4A3BPQ9Y5P4 624 aa12.89□□□□□ -0.35
TP53-220ENST00000610623 A0A0A6YYK5 440 aaPredicted RBP12.88□□□□□ -0.35
TP53-220ENST00000610623 POLRMTO00411 1230 aaKnown RBP12.88□□□□□ -0.35
TP53-220ENST00000610623 ANXA13P27216 316 aa12.88□□□□□ -0.35
TP53-220ENST00000610623 PCK1P35558 622 aa12.88□□□□□ -0.35
TP53-220ENST00000610623 NPEPPSP55786 919 aa12.88□□□□□ -0.35
TP53-220ENST00000610623 PTENP60484 403 aa12.88□□□□□ -0.35
TP53-220ENST00000610623 FKBP3Q00688 224 aaKnown RBP12.88□□□□□ -0.35
TP53-220ENST00000610623 CCDC15Q0P6D6 951 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms