RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 STK39Q9UEW8 545 aa17.44■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 DENND4AQ7Z401 1863 aa17.44■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 SSBP05455 408 aaKnown RBP eCLIP17.43■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 SRFP11831 508 aa17.43■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 FGFR4P22455 802 aa17.43■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 CLCN4P51793 760 aa17.43■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 PTH1RQ03431 593 aa17.43■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 DIEXFQ68CQ4 756 aaKnown RBP17.43■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 GLB1LQ6UWU2 654 aa17.43■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 PLA2G4DQ86XP0 818 aa17.43■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 SMC5Q8IY18 1101 aa17.43■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 MB21D2Q8IYB1 491 aaPredicted RBP17.43■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 LRRC71Q8N4P6 559 aa17.43■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 NLRP7Q8WX94 980 aa17.43■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 NXPE3Q969Y0 559 aa17.43■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 KLHL5Q96PQ7 755 aa17.43■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 GBP3Q9H0R5 595 aa17.43■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 RIC8AQ9NPQ8 531 aa17.43■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 NCDNQ9UBB6 729 aa17.43■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 MAFBQ9Y5Q3 323 aaPredicted RBP17.43■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 TAF6LQ9Y6J9 622 aa17.43■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 ZNF292O60281 2723 aa17.42■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 IPO5O00410 1097 aaKnown RBP17.42■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 PSAPP07602 524 aa17.42■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 GALTP07902 379 aa17.42■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 DARSP14868 501 aaKnown RBP17.42■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 NUCB1Q02818 461 aa17.42■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 PHLDB3Q6NSJ2 640 aa17.42■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 NIPA1Q7RTP0 329 aa17.42■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 TEX2Q8IWB9 1127 aa17.42■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 SLC44A3Q8N4M1 653 aa17.42■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 GPR152Q8TDT2 470 aa17.42■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 FAM167AQ96KS9 214 aa17.42■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 NRDE2Q9H7Z3 1164 aa17.42■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 ARHGEF3Q9NR81 526 aa17.42■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 TBC1D13Q9NVG8 400 aa17.42■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 DPP7Q9UHL4 492 aa17.42■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 INPP5FQ9Y2H2 1132 aa17.42■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 SAMM50Q9Y512 469 aa17.42■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 PRC1O43663 620 aa17.41■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 N4BP1O75113 896 aaKnown RBP17.41■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 SKIP12755 728 aa17.41■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 SREBF1P36956 1147 aa17.41■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 PHKA2P46019 1235 aa17.41■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 GPC3P51654 580 aa17.41■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 ADCY7P51828 1080 aa17.41■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 AP3B2Q13367 1082 aa17.41■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 LONRF3Q496Y0 759 aa17.41■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 NOMO2Q5JPE7 1267 aa17.41■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 TWF2Q6IBS0 349 aaKnown RBP17.41■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 SMAP1Q8IYB5 467 aaPredicted RBP17.41■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 GPR161Q8N6U8 529 aaKnown RBP17.41■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 LPPQ93052 612 aa17.41■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 SECISBP2LQ93073 1101 aaKnown RBP17.41■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 ZNF577Q9BSK1 485 aa17.41■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 MTA3Q9BTC8 594 aa17.41■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 WDR6Q9NNW5 1121 aaKnown RBP17.41■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 MAN1C1Q9NR34 630 aa17.41■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 CHST12Q9NRB3 414 aa17.41■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 MRPL17Q9NRX2 175 aaKnown RBP17.41■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 TBC1D22BQ9NU19 505 aa17.41■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 GABBR1Q9UBS5 961 aa17.41■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 PCDHA10Q9Y5I2 948 aa17.41■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 SLC12A7Q9Y666 1083 aa17.41■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 CCDC195A0A1B0GUA6 201 aa17.4■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 DHX15O43143 795 aaKnown RBP17.4■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 CNPP09543 421 aaKnown RBP17.4■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 VARS2Q5ST30 1063 aaKnown RBP17.4■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 KIAA0319Q5VV43 1072 aa17.4■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 WWC2Q6AWC2 1192 aa17.4■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 ZNF746Q6NUN9 644 aaPredicted RBP17.4■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 PPP1R18Q6NYC8 613 aa17.4■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 CYP26C1Q6V0L0 522 aa17.4■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 TMTC3Q6ZXV5 915 aa17.4■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 RAB11FIP4Q86YS3 637 aa17.4■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 SUMF1Q8NBK3 374 aa17.4■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 CMASQ8NFW8 434 aaPredicted RBP17.4■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 BCL7CQ8WUZ0 217 aaPredicted RBP17.4■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 BORCS6Q96GS4 357 aa17.4■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 TMEM87BQ96K49 555 aa17.4■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 NRBP2Q9NSY0 501 aa17.4■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 EPS15L1Q9UBC2 864 aa17.4■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 CLUHO75153 1309 aa17.4■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 EVPLQ92817 2033 aa17.4■□□□□ 0.38
NEDD8-MDP1-204ENST00000605847 SH2B2O14492 632 aaPredicted RBP17.39■□□□□ 0.37
NEDD8-MDP1-204ENST00000605847 CSDE1O75534 798 aaKnown RBP17.39■□□□□ 0.37
NEDD8-MDP1-204ENST00000605847 MCM5P33992 734 aa17.39■□□□□ 0.37
NEDD8-MDP1-204ENST00000605847 SLC11A1P49279 550 aa17.39■□□□□ 0.37
NEDD8-MDP1-204ENST00000605847 DCLRE1AQ6PJP8 1040 aa17.39■□□□□ 0.37
NEDD8-MDP1-204ENST00000605847 LINC01465Q8N7H1 131 aa17.39■□□□□ 0.37
NEDD8-MDP1-204ENST00000605847 FANCBQ8NB91 859 aa17.39■□□□□ 0.37
NEDD8-MDP1-204ENST00000605847 URGCPQ8TCY9 931 aa17.39■□□□□ 0.37
NEDD8-MDP1-204ENST00000605847 GCOM2Q9BZD3 368 aaPredicted RBP17.39■□□□□ 0.37
NEDD8-MDP1-204ENST00000605847 GLT8D2Q9H1C3 349 aa17.39■□□□□ 0.37
NEDD8-MDP1-204ENST00000605847 DLGAP2Q9P1A6 1054 aa17.39■□□□□ 0.37
NEDD8-MDP1-204ENST00000605847 DNAJB4Q9UDY4 337 aa17.39■□□□□ 0.37
NEDD8-MDP1-204ENST00000605847 FRYLO94915 3013 aa17.38■□□□□ 0.37
NEDD8-MDP1-204ENST00000605847 SMCO2A6NFE2 343 aa17.38■□□□□ 0.37
NEDD8-MDP1-204ENST00000605847 FAM86B1E9PN63 330 aa17.38■□□□□ 0.37
NEDD8-MDP1-204ENST00000605847 C2CD2LO14523 706 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms