RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 TXKP42681 527 aa20.24■□□□□ 0.83
CCDC12-208ENST00000603885 XKR9Q5GH70 373 aa20.24■□□□□ 0.83
CCDC12-208ENST00000603885 EP400NLQ6ZTU2 488 aa20.24■□□□□ 0.83
CCDC12-208ENST00000603885 KSR1Q8IVT5 923 aa20.24■□□□□ 0.83
CCDC12-208ENST00000603885 FAM184AQ8NB25 1140 aa20.24■□□□□ 0.83
CCDC12-208ENST00000603885 RNF169Q8NCN4 708 aa20.24■□□□□ 0.83
CCDC12-208ENST00000603885 SPPL3Q8TCT6 385 aa20.24■□□□□ 0.83
CCDC12-208ENST00000603885 PSPC1Q8WXF1 523 aaKnown RBP20.24■□□□□ 0.83
CCDC12-208ENST00000603885 MTMR9Q96QG7 549 aa20.24■□□□□ 0.83
CCDC12-208ENST00000603885 TYW1Q9NV66 732 aaKnown RBP20.24■□□□□ 0.83
CCDC12-208ENST00000603885 COL4A3BPQ9Y5P4 624 aa20.24■□□□□ 0.83
CCDC12-208ENST00000603885 A0A0U1RQF3 1178 aa20.23■□□□□ 0.83
CCDC12-208ENST00000603885 SLITRK3O94933 977 aa20.23■□□□□ 0.83
CCDC12-208ENST00000603885 ATP2B1P20020 1258 aa20.23■□□□□ 0.83
CCDC12-208ENST00000603885 CAMK1Q14012 370 aa20.23■□□□□ 0.83
CCDC12-208ENST00000603885 COL19A1Q14993 1142 aa20.23■□□□□ 0.83
CCDC12-208ENST00000603885 EMC2Q15006 297 aa20.23■□□□□ 0.83
CCDC12-208ENST00000603885 RABEP1Q15276 862 aa20.23■□□□□ 0.83
CCDC12-208ENST00000603885 CSPP1Q1MSJ5 1256 aa20.23■□□□□ 0.83
CCDC12-208ENST00000603885 FBXO18Q8NFZ0 1043 aa20.23■□□□□ 0.83
CCDC12-208ENST00000603885 POF1BQ8WVV4 589 aa20.23■□□□□ 0.83
CCDC12-208ENST00000603885 TCP11Q8WWU5 503 aa20.23■□□□□ 0.83
CCDC12-208ENST00000603885 PRPF31Q8WWY3 499 aaKnown RBP20.23■□□□□ 0.83
CCDC12-208ENST00000603885 PPP2R3CQ969Q6 453 aa20.23■□□□□ 0.83
CCDC12-208ENST00000603885 TMEM143Q96AN5 459 aa20.23■□□□□ 0.83
CCDC12-208ENST00000603885 HSD17B14Q9BPX1 270 aa20.23■□□□□ 0.83
CCDC12-208ENST00000603885 FOXP1Q9H334 677 aaPredicted RBP20.23■□□□□ 0.83
CCDC12-208ENST00000603885 LYPLA2O95372 231 aa20.22■□□□□ 0.83
CCDC12-208ENST00000603885 EOMESO95936 686 aa20.22■□□□□ 0.83
CCDC12-208ENST00000603885 LAG3P18627 525 aa20.22■□□□□ 0.83
CCDC12-208ENST00000603885 DNAJB1P25685 340 aa20.22■□□□□ 0.83
CCDC12-208ENST00000603885 MCM7P33993 719 aa20.22■□□□□ 0.83
CCDC12-208ENST00000603885 GNL2Q13823 731 aaKnown RBP20.22■□□□□ 0.83
CCDC12-208ENST00000603885 CATSPER4Q7RTX7 472 aa20.22■□□□□ 0.83
CCDC12-208ENST00000603885 LRRC43Q8N309 656 aa20.22■□□□□ 0.83
CCDC12-208ENST00000603885 COLGALT1Q8NBJ5 622 aa20.22■□□□□ 0.83
CCDC12-208ENST00000603885 CCDC43Q96MW1 224 aaKnown RBP20.22■□□□□ 0.83
CCDC12-208ENST00000603885 CASD1Q96PB1 797 aa20.22■□□□□ 0.83
CCDC12-208ENST00000603885 BMP2KQ9NSY1 1161 aaPredicted RBP20.22■□□□□ 0.83
CCDC12-208ENST00000603885 RNF19AQ9NV58 838 aa20.22■□□□□ 0.83
CCDC12-208ENST00000603885 CLDND1Q9NY35 253 aa20.22■□□□□ 0.83
CCDC12-208ENST00000603885 HCSTQ9UBK5 93 aa20.22■□□□□ 0.83
CCDC12-208ENST00000603885 PIN4Q9Y237 131 aaKnown RBP20.22■□□□□ 0.83
CCDC12-208ENST00000603885 ARID2Q68CP9 1835 aa20.21■□□□□ 0.83
CCDC12-208ENST00000603885 H3BQ06 376 aaPredicted RBP20.21■□□□□ 0.83
CCDC12-208ENST00000603885 ZBTB39O15060 712 aa20.21■□□□□ 0.83
CCDC12-208ENST00000603885 UBE3AQ05086 875 aa20.21■□□□□ 0.83
CCDC12-208ENST00000603885 HYAL1Q12794 435 aa20.21■□□□□ 0.83
CCDC12-208ENST00000603885 ORC2Q13416 577 aaPredicted RBP20.21■□□□□ 0.83
CCDC12-208ENST00000603885 PUS10Q3MIT2 529 aaKnown RBP20.21■□□□□ 0.83
CCDC12-208ENST00000603885 TWF2Q6IBS0 349 aaKnown RBP20.21■□□□□ 0.83
CCDC12-208ENST00000603885 ZNF598Q86UK7 904 aaKnown RBP20.21■□□□□ 0.83
CCDC12-208ENST00000603885 THNSL1Q8IYQ7 743 aa20.21■□□□□ 0.83
CCDC12-208ENST00000603885 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.21■□□□□ 0.83
CCDC12-208ENST00000603885 MTRQ99707 1265 aa20.21■□□□□ 0.83
CCDC12-208ENST00000603885 TRAIPQ9BWF2 469 aa20.21■□□□□ 0.83
CCDC12-208ENST00000603885 TMEM60Q9H2L4 133 aa20.21■□□□□ 0.83
CCDC12-208ENST00000603885 CWH43Q9H720 699 aa20.21■□□□□ 0.83
CCDC12-208ENST00000603885 UPF2Q9HAU5 1272 aaKnown RBP20.21■□□□□ 0.83
CCDC12-208ENST00000603885 IFT122Q9HBG6 1241 aa20.21■□□□□ 0.83
CCDC12-208ENST00000603885 POTEMA6NI47 508 aa20.2■□□□□ 0.82
CCDC12-208ENST00000603885 ASAP2O43150 1006 aa20.2■□□□□ 0.82
CCDC12-208ENST00000603885 ST18O60284 1047 aa20.2■□□□□ 0.82
CCDC12-208ENST00000603885 FGF18O76093 207 aa20.2■□□□□ 0.82
CCDC12-208ENST00000603885 SRGAP2CP0DJJ0 459 aa20.2■□□□□ 0.82
CCDC12-208ENST00000603885 SKIP12755 728 aa20.2■□□□□ 0.82
CCDC12-208ENST00000603885 PHKA2P46019 1235 aa20.2■□□□□ 0.82
CCDC12-208ENST00000603885 LAMTOR4Q0VGL1 99 aa20.2■□□□□ 0.82
CCDC12-208ENST00000603885 CLLU1OSQ5K130 101 aa20.2■□□□□ 0.82
CCDC12-208ENST00000603885 PTCRAQ6ISU1 281 aaPredicted RBP20.2■□□□□ 0.82
CCDC12-208ENST00000603885 SRGAP1Q7Z6B7 1085 aa20.2■□□□□ 0.82
CCDC12-208ENST00000603885 ANKEF1Q9NU02 776 aa20.2■□□□□ 0.82
CCDC12-208ENST00000603885 PLXNA4Q9HCM2 1894 aa20.2■□□□□ 0.82
CCDC12-208ENST00000603885 ATF7P17544 494 aaPredicted RBP20.19■□□□□ 0.82
CCDC12-208ENST00000603885 IRS1P35568 1242 aa20.19■□□□□ 0.82
CCDC12-208ENST00000603885 CTC1Q2NKJ3 1217 aa20.19■□□□□ 0.82
CCDC12-208ENST00000603885 LRRC55Q6ZSA7 311 aa20.19■□□□□ 0.82
CCDC12-208ENST00000603885 FERMT3Q86UX7 667 aa20.19■□□□□ 0.82
CCDC12-208ENST00000603885 NOSTRINQ8IVI9 506 aa20.19■□□□□ 0.82
CCDC12-208ENST00000603885 HELQQ8TDG4 1101 aa20.19■□□□□ 0.82
CCDC12-208ENST00000603885 RSPH1Q8WYR4 309 aa20.19■□□□□ 0.82
CCDC12-208ENST00000603885 MRPL9Q9BYD2 267 aaKnown RBP20.19■□□□□ 0.82
CCDC12-208ENST00000603885 IGFLR1Q9H665 355 aa20.19■□□□□ 0.82
CCDC12-208ENST00000603885 TLR9Q9NR96 1032 aa20.19■□□□□ 0.82
CCDC12-208ENST00000603885 DGAT1O75907 488 aa20.18■□□□□ 0.82
CCDC12-208ENST00000603885 OR52Z1P0C646 297 aa20.18■□□□□ 0.82
CCDC12-208ENST00000603885 PPM1AP35813 382 aa20.18■□□□□ 0.82
CCDC12-208ENST00000603885 RAB27AP51159 221 aa20.18■□□□□ 0.82
CCDC12-208ENST00000603885 MXD4Q14582 209 aaPredicted RBP20.18■□□□□ 0.82
CCDC12-208ENST00000603885 ZNF174Q15697 407 aa20.18■□□□□ 0.82
CCDC12-208ENST00000603885 TTC38Q5R3I4 469 aa20.18■□□□□ 0.82
CCDC12-208ENST00000603885 RNF149Q8NC42 400 aa20.18■□□□□ 0.82
CCDC12-208ENST00000603885 MICAL1Q8TDZ2 1067 aa20.18■□□□□ 0.82
CCDC12-208ENST00000603885 ZNF558Q96NG5 402 aa20.18■□□□□ 0.82
CCDC12-208ENST00000603885 XPNPEP1Q9NQW7 623 aa20.18■□□□□ 0.82
CCDC12-208ENST00000603885 AGPAT5Q9NUQ2 364 aa20.18■□□□□ 0.82
CCDC12-208ENST00000603885 FAM105AQ9NUU6 356 aa20.18■□□□□ 0.82
CCDC12-208ENST00000603885 NOL7Q9UMY1 257 aaKnown RBP20.18■□□□□ 0.82
CCDC12-208ENST00000603885 FAM50BQ9Y247 325 aa20.18■□□□□ 0.82
CCDC12-208ENST00000603885 GRXCR2A6NFK2 248 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms