RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 BRAPQ7Z569 592 aa26.45■■□□□ 1.82
SSX2IP-209ENST00000603677 IGSF22Q8N9C0 903 aa26.45■■□□□ 1.82
SSX2IP-209ENST00000603677 PRPF31Q8WWY3 499 aaKnown RBP26.45■■□□□ 1.82
SSX2IP-209ENST00000603677 IFT122Q9HBG6 1241 aa26.45■■□□□ 1.82
SSX2IP-209ENST00000603677 PRRC2BQ5JSZ5 2229 aaKnown RBP26.45■■□□□ 1.82
SSX2IP-209ENST00000603677 CARNS1A5YM72 827 aa26.44■■□□□ 1.82
SSX2IP-209ENST00000603677 LAMTOR4Q0VGL1 99 aa26.44■■□□□ 1.82
SSX2IP-209ENST00000603677 TFDP1Q14186 410 aa26.44■■□□□ 1.82
SSX2IP-209ENST00000603677 ARL6IP4Q66PJ3 421 aaKnown RBP26.44■■□□□ 1.82
SSX2IP-209ENST00000603677 FERMT3Q86UX7 667 aa26.44■■□□□ 1.82
SSX2IP-209ENST00000603677 IFNLR1Q8IU57 520 aaPredicted RBP26.44■■□□□ 1.82
SSX2IP-209ENST00000603677 ZNF579Q8NAF0 562 aaKnown RBP26.44■■□□□ 1.82
SSX2IP-209ENST00000603677 MCPH1Q8NEM0 835 aa26.44■■□□□ 1.82
SSX2IP-209ENST00000603677 ATXN2LQ8WWM7 1075 aaKnown RBP26.44■■□□□ 1.82
SSX2IP-209ENST00000603677 MRPL38Q96DV4 380 aaKnown RBP26.44■■□□□ 1.82
SSX2IP-209ENST00000603677 NFKBIZQ9BYH8 718 aa26.44■■□□□ 1.82
SSX2IP-209ENST00000603677 LRWD1Q9UFC0 647 aa26.44■■□□□ 1.82
SSX2IP-209ENST00000603677 PCDHB6Q9Y5E3 794 aa26.44■■□□□ 1.82
SSX2IP-209ENST00000603677 EYSQ5T1H1 3165 aa26.44■■□□□ 1.82
SSX2IP-209ENST00000603677 RFXAPO00287 272 aa26.43■■□□□ 1.82
SSX2IP-209ENST00000603677 BMP15O95972 392 aa26.43■■□□□ 1.82
SSX2IP-209ENST00000603677 LINC00271P0C7V0 271 aa26.43■■□□□ 1.82
SSX2IP-209ENST00000603677 RAB27AP51159 221 aa26.43■■□□□ 1.82
SSX2IP-209ENST00000603677 CSPP1Q1MSJ5 1256 aa26.43■■□□□ 1.82
SSX2IP-209ENST00000603677 AAASQ9NRG9 546 aa26.43■■□□□ 1.82
SSX2IP-209ENST00000603677 PHKA2P46019 1235 aa26.42■■□□□ 1.82
SSX2IP-209ENST00000603677 GPM6BQ13491 265 aa26.42■■□□□ 1.82
SSX2IP-209ENST00000603677 DTHD1Q6ZMT9 781 aa26.42■■□□□ 1.82
SSX2IP-209ENST00000603677 NLRP4Q96MN2 994 aa26.42■■□□□ 1.82
SSX2IP-209ENST00000603677 MTUS1Q9ULD2 1270 aa26.42■■□□□ 1.82
SSX2IP-209ENST00000603677 COG5Q9UP83 839 aa26.42■■□□□ 1.82
SSX2IP-209ENST00000603677 COL4A4P53420 1690 aaPredicted RBP26.41■■□□□ 1.82
SSX2IP-209ENST00000603677 ZBTB39O15060 712 aa26.41■■□□□ 1.82
SSX2IP-209ENST00000603677 ZNF623O75123 536 aa26.41■■□□□ 1.82
SSX2IP-209ENST00000603677 MED24O75448 989 aa26.41■■□□□ 1.82
SSX2IP-209ENST00000603677 PDIA4P13667 645 aaKnown RBP26.41■■□□□ 1.82
SSX2IP-209ENST00000603677 ATP2C1P98194 919 aaPredicted RBP26.41■■□□□ 1.82
SSX2IP-209ENST00000603677 CATSPER4Q7RTX7 472 aa26.41■■□□□ 1.82
SSX2IP-209ENST00000603677 SPRED2Q7Z698 418 aa26.41■■□□□ 1.82
SSX2IP-209ENST00000603677 ECHDC2Q86YB7 292 aa26.41■■□□□ 1.82
SSX2IP-209ENST00000603677 GDPD5Q8WTR4 605 aa26.41■■□□□ 1.82
SSX2IP-209ENST00000603677 TMEM143Q96AN5 459 aa26.41■■□□□ 1.82
SSX2IP-209ENST00000603677 TMEM117Q9H0C3 514 aa26.41■■□□□ 1.82
SSX2IP-209ENST00000603677 XPNPEP1Q9NQW7 623 aa26.41■■□□□ 1.82
SSX2IP-209ENST00000603677 PRUNE2Q8WUY3 3088 aa26.4■■□□□ 1.82
SSX2IP-209ENST00000603677 SLC26A4O43511 780 aa26.4■■□□□ 1.82
SSX2IP-209ENST00000603677 AXLP30530 894 aa26.4■■□□□ 1.82
SSX2IP-209ENST00000603677 CTNNB1P35222 781 aa26.4■■□□□ 1.82
SSX2IP-209ENST00000603677 ARL2P36404 184 aa26.4■■□□□ 1.82
SSX2IP-209ENST00000603677 NCBP1Q09161 790 aaKnown RBP26.4■■□□□ 1.82
SSX2IP-209ENST00000603677 AAK1Q2M2I8 961 aa26.4■■□□□ 1.82
SSX2IP-209ENST00000603677 TIGD5Q53EQ6 642 aa26.4■■□□□ 1.82
SSX2IP-209ENST00000603677 PIGOQ8TEQ8 1089 aa26.4■■□□□ 1.82
SSX2IP-209ENST00000603677 SNX21Q969T3 373 aa26.4■■□□□ 1.82
SSX2IP-209ENST00000603677 AGPAT5Q9NUQ2 364 aa26.4■■□□□ 1.82
SSX2IP-209ENST00000603677 THEGQ9P2T0 379 aa26.4■■□□□ 1.82
SSX2IP-209ENST00000603677 FNDC1Q4ZHG4 1894 aaPredicted RBP26.4■■□□□ 1.82
SSX2IP-209ENST00000603677 PTENP60484 403 aa26.39■■□□□ 1.82
SSX2IP-209ENST00000603677 KRT79Q5XKE5 535 aa26.39■■□□□ 1.82
SSX2IP-209ENST00000603677 KSR1Q8IVT5 923 aa26.39■■□□□ 1.82
SSX2IP-209ENST00000603677 RNF149Q8NC42 400 aa26.39■■□□□ 1.82
SSX2IP-209ENST00000603677 CCDC51Q96ER9 411 aa26.39■■□□□ 1.82
SSX2IP-209ENST00000603677 UNC80Q8N2C7 3258 aa26.39■■□□□ 1.81
SSX2IP-209ENST00000603677 K7ELQ4 463 aaPredicted RBP26.38■■□□□ 1.81
SSX2IP-209ENST00000603677 SRGAP2CP0DJJ0 459 aa26.38■■□□□ 1.81
SSX2IP-209ENST00000603677 CCT6AP40227 531 aaKnown RBP26.38■■□□□ 1.81
SSX2IP-209ENST00000603677 ZNF598Q86UK7 904 aaKnown RBP26.38■■□□□ 1.81
SSX2IP-209ENST00000603677 ABI1Q8IZP0 508 aa26.38■■□□□ 1.81
SSX2IP-209ENST00000603677 CNNM3Q8NE01 707 aa26.38■■□□□ 1.81
SSX2IP-209ENST00000603677 SYMPKQ92797 1274 aaKnown RBP26.38■■□□□ 1.81
SSX2IP-209ENST00000603677 PCDHB12Q9Y5F1 795 aa26.38■■□□□ 1.81
SSX2IP-209ENST00000603677 MRPL42Q9Y6G3 142 aaKnown RBP26.38■■□□□ 1.81
SSX2IP-209ENST00000603677 NCK2O43639 380 aa26.37■■□□□ 1.81
SSX2IP-209ENST00000603677 UBE3AQ05086 875 aa26.37■■□□□ 1.81
SSX2IP-209ENST00000603677 NBR1Q14596 966 aa26.37■■□□□ 1.81
SSX2IP-209ENST00000603677 CCDC85BQ15834 202 aaPredicted RBP26.37■■□□□ 1.81
SSX2IP-209ENST00000603677 TWF2Q6IBS0 349 aaKnown RBP26.37■■□□□ 1.81
SSX2IP-209ENST00000603677 PPM1EQ8WY54 764 aa26.37■■□□□ 1.81
SSX2IP-209ENST00000603677 PGBD4Q96DM1 585 aa26.37■■□□□ 1.81
SSX2IP-209ENST00000603677 ZNF668Q96K58 619 aaPredicted RBP26.37■■□□□ 1.81
SSX2IP-209ENST00000603677 MRPL9Q9BYD2 267 aaKnown RBP26.37■■□□□ 1.81
SSX2IP-209ENST00000603677 PIN4Q9Y237 131 aaKnown RBP26.37■■□□□ 1.81
SSX2IP-209ENST00000603677 A0A0C4DFX4 3053 aa26.37■■□□□ 1.81
SSX2IP-209ENST00000603677 ARHGEF35A5YM69 484 aa26.36■■□□□ 1.81
SSX2IP-209ENST00000603677 CYP11B2P19099 503 aa26.36■■□□□ 1.81
SSX2IP-209ENST00000603677 AK8Q96MA6 479 aa26.36■■□□□ 1.81
SSX2IP-209ENST00000603677 NT5C3AQ9H0P0 336 aa26.36■■□□□ 1.81
SSX2IP-209ENST00000603677 DNM3Q9UQ16 869 aa26.36■■□□□ 1.81
SSX2IP-209ENST00000603677 TBKBP1A7MCY6 615 aa26.35■■□□□ 1.81
SSX2IP-209ENST00000603677 ERLIN2O94905 339 aa26.35■■□□□ 1.81
SSX2IP-209ENST00000603677 LAG3P18627 525 aa26.35■■□□□ 1.81
SSX2IP-209ENST00000603677 MRPS5P82675 430 aaKnown RBP26.35■■□□□ 1.81
SSX2IP-209ENST00000603677 FAM102BQ5T8I3 360 aa26.35■■□□□ 1.81
SSX2IP-209ENST00000603677 POTEGQ6S5H5 508 aa26.35■■□□□ 1.81
SSX2IP-209ENST00000603677 LRRC43Q8N309 656 aa26.35■■□□□ 1.81
SSX2IP-209ENST00000603677 MICALL1Q8N3F8 863 aa26.35■■□□□ 1.81
SSX2IP-209ENST00000603677 SNX29Q8TEQ0 813 aa26.35■■□□□ 1.81
SSX2IP-209ENST00000603677 PRIMPOLQ96LW4 560 aa26.35■■□□□ 1.81
SSX2IP-209ENST00000603677 FAM105AQ9NUU6 356 aa26.35■■□□□ 1.81
SSX2IP-209ENST00000603677 USO1O60763 962 aaKnown RBP26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms