RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 N4BP2Q86UW6 1770 aaPredicted RBP9.51□□□□□ -0.89
COMMD3-215ENST00000602574 WDR17Q8IZU2 1322 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 ABCC6O95255 1503 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 MYH13Q9UKX3 1938 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 SNTNA6NMZ2 147 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 TTLL13PA6NNM8 815 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 F8W031 263 aaPredicted RBP9.51□□□□□ -0.89
COMMD3-215ENST00000602574 PFDN6O15212 129 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 ATP9AO75110 1047 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 GUCY1B2O75343 617 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 KRT16P08779 473 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 PABPC1P11940 636 aaKnown RBP9.51□□□□□ -0.89
COMMD3-215ENST00000602574 GJB2P29033 226 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 COPS2P61201 443 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 RUNX1T1Q06455 604 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 MAPRE1Q15691 268 aaKnown RBP9.51□□□□□ -0.89
COMMD3-215ENST00000602574 PAPD7Q5XG87 772 aaKnown RBP9.51□□□□□ -0.89
COMMD3-215ENST00000602574 DHRS4L2Q6PKH6 230 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 CORO6Q6QEF8 472 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 CYP2U1Q7Z449 544 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 FMR1NBQ8N0W7 255 aaPredicted RBP9.51□□□□□ -0.89
COMMD3-215ENST00000602574 ZNF496Q96IT1 587 aaPredicted RBP9.51□□□□□ -0.89
COMMD3-215ENST00000602574 USP28Q96RU2 1077 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 RIOK1Q9BRS2 568 aaKnown RBP9.51□□□□□ -0.89
COMMD3-215ENST00000602574 SNX25Q9H3E2 840 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 ZHX3Q9H4I2 956 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 TMBIM4Q9HC24 238 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 TMA7Q9Y2S6 64 aaKnown RBP9.51□□□□□ -0.89
COMMD3-215ENST00000602574 NEXMIFQ5QGS0 1516 aa9.5□□□□□ -0.89
COMMD3-215ENST00000602574 PVALEFA0A1B0GWK0 134 aa9.5□□□□□ -0.89
COMMD3-215ENST00000602574 MACROD2A1Z1Q3 448 aa9.5□□□□□ -0.89
COMMD3-215ENST00000602574 A6NJR5 290 aa9.5□□□□□ -0.89
COMMD3-215ENST00000602574 EIF4E1BA6NMX2 242 aaKnown RBP9.5□□□□□ -0.89
COMMD3-215ENST00000602574 SPDYE16A6NNV3 312 aaPredicted RBP9.5□□□□□ -0.89
COMMD3-215ENST00000602574 ALOX15BO15296 676 aa9.5□□□□□ -0.89
COMMD3-215ENST00000602574 SEC24DO94855 1032 aaPredicted RBP9.5□□□□□ -0.89
COMMD3-215ENST00000602574 KLHL2O95198 593 aa9.5□□□□□ -0.89
COMMD3-215ENST00000602574 LYNP07948 512 aa9.5□□□□□ -0.89
COMMD3-215ENST00000602574 CCNB1P14635 433 aa9.5□□□□□ -0.89
COMMD3-215ENST00000602574 ZNF12P17014 697 aa9.5□□□□□ -0.89
COMMD3-215ENST00000602574 HSD17B2P37059 387 aa9.5□□□□□ -0.89
COMMD3-215ENST00000602574 HAAOP46952 286 aa9.5□□□□□ -0.89
COMMD3-215ENST00000602574 BCAP31P51572 246 aa9.5□□□□□ -0.89
COMMD3-215ENST00000602574 RTP1P59025 263 aa9.5□□□□□ -0.89
COMMD3-215ENST00000602574 EZH2Q15910 746 aaKnown RBP9.5□□□□□ -0.89
COMMD3-215ENST00000602574 MAP3K21Q5TCX8 1036 aa9.5□□□□□ -0.89
COMMD3-215ENST00000602574 SFR1Q86XK3 245 aa9.5□□□□□ -0.89
COMMD3-215ENST00000602574 CPSF7Q8N684 471 aaKnown RBP9.5□□□□□ -0.89
COMMD3-215ENST00000602574 LILRB4Q8NHJ6 448 aa9.5□□□□□ -0.89
COMMD3-215ENST00000602574 PIGOQ8TEQ8 1089 aa9.5□□□□□ -0.89
COMMD3-215ENST00000602574 AGXT2Q9BYV1 514 aa9.5□□□□□ -0.89
COMMD3-215ENST00000602574 PPP1R12CQ9BZL4 782 aa9.5□□□□□ -0.89
COMMD3-215ENST00000602574 ECT2Q9H8V3 914 aa9.5□□□□□ -0.89
COMMD3-215ENST00000602574 C14orf93Q9H972 538 aaKnown RBP9.5□□□□□ -0.89
COMMD3-215ENST00000602574 VANGL2Q9ULK5 521 aa9.5□□□□□ -0.89
COMMD3-215ENST00000602574 LRRC7Q96NW7 1537 aa9.5□□□□□ -0.89
COMMD3-215ENST00000602574 ATP7BP35670 1465 aa9.5□□□□□ -0.89
COMMD3-215ENST00000602574 FUOMA2VDF0 154 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 TRIM64A6NGJ6 449 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 TRIM64BA6NI03 449 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 ZNF233A6NK53 670 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 O00370 1275 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 RGS13O14921 159 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 SULT1B1O43704 296 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 ATP2C2O75185 946 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 BAIAP3O94812 1187 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 POLR2CP19387 275 aaPredicted RBP9.49□□□□□ -0.89
COMMD3-215ENST00000602574 ADCY8P40145 1251 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 HNRNPFP52597 415 aaKnown RBP9.49□□□□□ -0.89
COMMD3-215ENST00000602574 KCNC4Q03721 635 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 CHRNEQ04844 493 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 STILQ15468 1287 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 TMC7Q7Z402 723 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 ANKMY2Q8IV38 441 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 TSEN2Q8NCE0 465 aaKnown RBP9.49□□□□□ -0.89
COMMD3-215ENST00000602574 RAPGEF5Q92565 580 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 NRBF2Q96F24 287 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 PBKQ96KB5 322 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 TMEM237Q96Q45 408 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 XPO6Q96QU8 1125 aaKnown RBP9.49□□□□□ -0.89
COMMD3-215ENST00000602574 SPZ1Q9BXG8 430 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 IMPG2Q9BZV3 1241 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 DCLRE1BQ9H816 532 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 PLGRKTQ9HBL7 147 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 NMRK1Q9NWW6 199 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 DBF4Q9UBU7 674 aaPredicted RBP9.49□□□□□ -0.89
COMMD3-215ENST00000602574 ZC3H7BQ9UGR2 993 aaKnown RBP9.49□□□□□ -0.89
COMMD3-215ENST00000602574 STX8Q9UNK0 236 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 AOX1Q06278 1338 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 SOBPA7XYQ1 873 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 GOLGA8BA8MQT2 603 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 MAGEB3O15480 346 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 ATP5HO75947 161 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 ENO2P09104 434 aaPredicted RBP9.49□□□□□ -0.89
COMMD3-215ENST00000602574 GZMAP12544 262 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 ZKSCAN1P17029 563 aaPredicted RBP9.49□□□□□ -0.89
COMMD3-215ENST00000602574 GTF2H1P32780 548 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 UBA7P41226 1012 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 PRCPP42785 496 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 PDE4DQ08499 809 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms