RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 STAT6P42226 847 aa14.41□□□□□ -0.1
SRRM1-223ENST00000600523 SPECC1Q5M775 1068 aa14.41□□□□□ -0.1
SRRM1-223ENST00000600523 KSR1Q8IVT5 923 aa14.41□□□□□ -0.1
SRRM1-223ENST00000600523 HERC6Q8IVU3 1022 aa14.41□□□□□ -0.1
SRRM1-223ENST00000600523 SYT2Q8N9I0 419 aaPredicted RBP14.41□□□□□ -0.1
SRRM1-223ENST00000600523 VWCEQ96DN2 955 aa14.41□□□□□ -0.1
SRRM1-223ENST00000600523 EPSTI1Q96J88 318 aa14.41□□□□□ -0.1
SRRM1-223ENST00000600523 LRRC27Q9C0I9 530 aa14.41□□□□□ -0.1
SRRM1-223ENST00000600523 C17orf75Q9HAS0 396 aa14.41□□□□□ -0.1
SRRM1-223ENST00000600523 CDHR5Q9HBB8 845 aa14.41□□□□□ -0.1
SRRM1-223ENST00000600523 ERVK-5Q9HDB9 667 aa14.41□□□□□ -0.1
SRRM1-223ENST00000600523 XPNPEP1Q9NQW7 623 aa14.41□□□□□ -0.1
SRRM1-223ENST00000600523 CHST12Q9NRB3 414 aa14.41□□□□□ -0.1
SRRM1-223ENST00000600523 RCOR1Q9UKL0 485 aa14.41□□□□□ -0.1
SRRM1-223ENST00000600523 LRFN2Q9ULH4 789 aa14.41□□□□□ -0.1
SRRM1-223ENST00000600523 LOXHD1Q8IVV2 1947 aa14.41□□□□□ -0.1
SRRM1-223ENST00000600523 GOLGA6L4A6NEF3 574 aa14.4□□□□□ -0.1
SRRM1-223ENST00000600523 INO80B-WBP1J3KQ70 363 aa14.4□□□□□ -0.1
SRRM1-223ENST00000600523 TLL1O43897 1013 aa14.4□□□□□ -0.1
SRRM1-223ENST00000600523 DDIT3P35638 169 aa14.4□□□□□ -0.1
SRRM1-223ENST00000600523 SMTNP53814 917 aa14.4□□□□□ -0.1
SRRM1-223ENST00000600523 GRIN1Q05586 938 aa14.4□□□□□ -0.1
SRRM1-223ENST00000600523 DMP1Q13316 513 aaPredicted RBP14.4□□□□□ -0.1
SRRM1-223ENST00000600523 DHX8Q14562 1220 aaKnown RBP14.4□□□□□ -0.1
SRRM1-223ENST00000600523 CSPP1Q1MSJ5 1256 aa14.4□□□□□ -0.1
SRRM1-223ENST00000600523 TMEM132AQ24JP5 1023 aa14.4□□□□□ -0.1
SRRM1-223ENST00000600523 GPR153Q6NV75 609 aa14.4□□□□□ -0.1
SRRM1-223ENST00000600523 FAM228AQ86W67 206 aa14.4□□□□□ -0.1
SRRM1-223ENST00000600523 DEPTORQ8TB45 409 aa14.4□□□□□ -0.1
SRRM1-223ENST00000600523 TMEM40Q8WWA1 233 aa14.4□□□□□ -0.1
SRRM1-223ENST00000600523 LARP4BQ92615 738 aaKnown RBP14.4□□□□□ -0.1
SRRM1-223ENST00000600523 PNMA5Q96PV4 448 aa14.4□□□□□ -0.1
SRRM1-223ENST00000600523 ADAM2Q99965 735 aa14.4□□□□□ -0.1
SRRM1-223ENST00000600523 NFKBIZQ9BYH8 718 aa14.4□□□□□ -0.1
SRRM1-223ENST00000600523 TSPYL2Q9H2G4 693 aaPredicted RBP14.4□□□□□ -0.1
SRRM1-223ENST00000600523 ZDHHC9Q9Y397 364 aa14.4□□□□□ -0.1
SRRM1-223ENST00000600523 PCDHA11Q9Y5I1 949 aa14.4□□□□□ -0.1
SRRM1-223ENST00000600523 ARID2Q68CP9 1835 aa14.39□□□□□ -0.11
SRRM1-223ENST00000600523 CCDC169A6NNP5 214 aa14.39□□□□□ -0.11
SRRM1-223ENST00000600523 H0YCG3 227 aa14.39□□□□□ -0.11
SRRM1-223ENST00000600523 ENPP3O14638 875 aa14.39□□□□□ -0.11
SRRM1-223ENST00000600523 TBCAO75347 108 aaKnown RBP14.39□□□□□ -0.11
SRRM1-223ENST00000600523 UPP2O95045 317 aa14.39□□□□□ -0.11
SRRM1-223ENST00000600523 SKIP12755 728 aa14.39□□□□□ -0.11
SRRM1-223ENST00000600523 GLRA2P23416 452 aa14.39□□□□□ -0.11
SRRM1-223ENST00000600523 GUCY2CP25092 1073 aa14.39□□□□□ -0.11
SRRM1-223ENST00000600523 NAMPTP43490 491 aa14.39□□□□□ -0.11
SRRM1-223ENST00000600523 EFNA5P52803 228 aa14.39□□□□□ -0.11
SRRM1-223ENST00000600523 PTENP60484 403 aa14.39□□□□□ -0.11
SRRM1-223ENST00000600523 TWF2Q6IBS0 349 aaKnown RBP14.39□□□□□ -0.11
SRRM1-223ENST00000600523 RINT1Q6NUQ1 792 aa14.39□□□□□ -0.11
SRRM1-223ENST00000600523 SLC24A5Q71RS6 500 aa14.39□□□□□ -0.11
SRRM1-223ENST00000600523 SV2BQ7L1I2 683 aa14.39□□□□□ -0.11
SRRM1-223ENST00000600523 GPBP1Q86WP2 473 aa14.39□□□□□ -0.11
SRRM1-223ENST00000600523 RAD54LQ92698 747 aa14.39□□□□□ -0.11
SRRM1-223ENST00000600523 TIFAQ96CG3 184 aa14.39□□□□□ -0.11
SRRM1-223ENST00000600523 YME1L1Q96TA2 773 aa14.39□□□□□ -0.11
SRRM1-223ENST00000600523 RAD9AQ99638 391 aa14.39□□□□□ -0.11
SRRM1-223ENST00000600523 CUEDC2Q9H467 287 aa14.39□□□□□ -0.11
SRRM1-223ENST00000600523 SLC28A3Q9HAS3 691 aa14.39□□□□□ -0.11
SRRM1-223ENST00000600523 IFT122Q9HBG6 1241 aa14.39□□□□□ -0.11
SRRM1-223ENST00000600523 GPRC5CQ9NQ84 441 aa14.39□□□□□ -0.11
SRRM1-223ENST00000600523 LARSQ9P2J5 1176 aaKnown RBP14.39□□□□□ -0.11
SRRM1-223ENST00000600523 ODF2LQ9ULJ1 636 aa14.39□□□□□ -0.11
SRRM1-223ENST00000600523 PIN4Q9Y237 131 aaKnown RBP14.39□□□□□ -0.11
SRRM1-223ENST00000600523 RBM19Q9Y4C8 960 aaKnown RBP14.39□□□□□ -0.11
SRRM1-223ENST00000600523 INSL6Q9Y581 213 aa14.39□□□□□ -0.11
SRRM1-223ENST00000600523 PCDHB7Q9Y5E2 793 aa14.39□□□□□ -0.11
SRRM1-223ENST00000600523 TMEM265A0A087WTH1 108 aa14.38□□□□□ -0.11
SRRM1-223ENST00000600523 HIP1RO75146 1068 aa14.38□□□□□ -0.11
SRRM1-223ENST00000600523 GJB5O95377 273 aa14.38□□□□□ -0.11
SRRM1-223ENST00000600523 IBSPP21815 317 aaPredicted RBP14.38□□□□□ -0.11
SRRM1-223ENST00000600523 SCP2P22307 547 aa14.38□□□□□ -0.11
SRRM1-223ENST00000600523 AXLP30530 894 aa14.38□□□□□ -0.11
SRRM1-223ENST00000600523 SLC12A3P55017 1021 aa14.38□□□□□ -0.11
SRRM1-223ENST00000600523 DEFB103AP81534 67 aa14.38□□□□□ -0.11
SRRM1-223ENST00000600523 AMPD3Q01432 767 aa14.38□□□□□ -0.11
SRRM1-223ENST00000600523 CAPSQ13938 189 aa14.38□□□□□ -0.11
SRRM1-223ENST00000600523 MAPK6Q16659 721 aa14.38□□□□□ -0.11
SRRM1-223ENST00000600523 ZNF697Q5TEC3 545 aa14.38□□□□□ -0.11
SRRM1-223ENST00000600523 FAM117BQ6P1L5 589 aa14.38□□□□□ -0.11
SRRM1-223ENST00000600523 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.38□□□□□ -0.119e-11■■■□□ 16.3
SRRM1-223ENST00000600523 C1orf186Q6ZWK4 172 aa14.38□□□□□ -0.11
SRRM1-223ENST00000600523 APBB1IPQ7Z5R6 666 aaPredicted RBP14.38□□□□□ -0.11
SRRM1-223ENST00000600523 IQUBQ8NA54 791 aa14.38□□□□□ -0.11
SRRM1-223ENST00000600523 ASAP3Q8TDY4 903 aa14.38□□□□□ -0.11
SRRM1-223ENST00000600523 LEO1Q8WVC0 666 aaPredicted RBP14.38□□□□□ -0.11
SRRM1-223ENST00000600523 TOP1MTQ969P6 601 aa14.38□□□□□ -0.11
SRRM1-223ENST00000600523 CCDC34Q96HJ3 373 aa14.38□□□□□ -0.11
SRRM1-223ENST00000600523 RGS18Q9NS28 235 aa14.38□□□□□ -0.11
SRRM1-223ENST00000600523 PRMT7Q9NVM4 692 aaPredicted RBP14.38□□□□□ -0.11
SRRM1-223ENST00000600523 PCDHA7Q9UN72 937 aa14.38□□□□□ -0.11
SRRM1-223ENST00000600523 MYH15Q9Y2K3 1946 aa14.38□□□□□ -0.11
SRRM1-223ENST00000600523 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.37□□□□□ -0.11
SRRM1-223ENST00000600523 HOXA2O43364 376 aa14.37□□□□□ -0.11
SRRM1-223ENST00000600523 CSDE1O75534 798 aaKnown RBP14.37□□□□□ -0.11
SRRM1-223ENST00000600523 FAM13AO94988 1023 aa14.37□□□□□ -0.11
SRRM1-223ENST00000600523 DNAJB2P25686 324 aa14.37□□□□□ -0.11
SRRM1-223ENST00000600523 ABCD1P33897 745 aa14.37□□□□□ -0.11
SRRM1-223ENST00000600523 SARSP49591 514 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms