RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 USP15Q9Y4E8 981 aaPredicted RBP20.14■□□□□ 0.81
ARHGEF1-221ENST00000600387 MIF4GDA9UHW6 222 aaKnown RBP20.14■□□□□ 0.81
ARHGEF1-221ENST00000600387 RARAP10276 462 aa20.14■□□□□ 0.81
ARHGEF1-221ENST00000600387 CASP4P49662 377 aa20.14■□□□□ 0.81
ARHGEF1-221ENST00000600387 ZNF211Q13398 564 aaPredicted RBP20.14■□□□□ 0.81
ARHGEF1-221ENST00000600387 EPS8L3Q8TE67 593 aaKnown RBP20.14■□□□□ 0.81
ARHGEF1-221ENST00000600387 RUNDC3BQ96NL0 473 aa20.14■□□□□ 0.81
ARHGEF1-221ENST00000600387 SYT11Q9BT88 431 aa20.14■□□□□ 0.81
ARHGEF1-221ENST00000600387 ROPN1BQ9BZX4 212 aaPredicted RBP20.14■□□□□ 0.81
ARHGEF1-221ENST00000600387 TAOK3Q9H2K8 898 aa20.14■□□□□ 0.81
ARHGEF1-221ENST00000600387 ROPN1Q9HAT0 212 aaPredicted RBP20.14■□□□□ 0.81
ARHGEF1-221ENST00000600387 ANKIB1Q9P2G1 1089 aa20.14■□□□□ 0.81
ARHGEF1-221ENST00000600387 AGAP1Q9UPQ3 857 aa20.14■□□□□ 0.81
ARHGEF1-221ENST00000600387 CYP3A7-CYP3A51PA0A087WV96 503 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 ANKRD62A6NC57 917 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 RIPK2O43353 540 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 UBOX5O94941 541 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 GGPS1O95749 300 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 RARGP13631 454 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 CYP3A7P24462 503 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 RPL21P46778 160 aaKnown RBP20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 HADHBP55084 474 aaKnown RBP20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 NCALDP61601 193 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 NBPF5PQ86XG9 351 aaPredicted RBP20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 CATSPER3Q86XQ3 398 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 RHOT2Q8IXI1 618 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 UBL4BQ8N7F7 174 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 AGAP11Q8TF27 550 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 PLCD4Q9BRC7 762 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 MTFR1LQ9H019 292 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 STK24Q9Y6E0 443 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 ZNF831Q5JPB2 1677 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 ZBTB5O15062 677 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 SUN1O94901 812 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 CCND1P24385 295 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 RFC4P35249 363 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 IFNAR2P48551 515 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 AUHQ13825 339 aaKnown RBP20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 DRAP1Q14919 205 aaPredicted RBP20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 GALNTL6Q49A17 601 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 ALG3Q92685 438 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 C18orf8Q96DM3 657 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 BORCS6Q96GS4 357 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 MBOAT7Q96N66 472 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 ECT2Q9H8V3 914 aa20.13■□□□□ 0.81
ARHGEF1-221ENST00000600387 PPP1R12AO14974 1030 aaPredicted RBP20.12■□□□□ 0.81
ARHGEF1-221ENST00000600387 TNFAIP3P21580 790 aa20.12■□□□□ 0.81
ARHGEF1-221ENST00000600387 CTNNA2P26232 953 aa20.12■□□□□ 0.81
ARHGEF1-221ENST00000600387 RPA1P27694 616 aa20.12■□□□□ 0.81
ARHGEF1-221ENST00000600387 STAT3P40763 770 aa20.12■□□□□ 0.81
ARHGEF1-221ENST00000600387 PABPC4Q13310 644 aaKnown RBP eCLIP20.12■□□□□ 0.81
ARHGEF1-221ENST00000600387 DDB1Q16531 1140 aa20.12■□□□□ 0.81
ARHGEF1-221ENST00000600387 MOXD1Q6UVY6 613 aa20.12■□□□□ 0.81
ARHGEF1-221ENST00000600387 ARHGEF26Q96DR7 871 aa20.12■□□□□ 0.81
ARHGEF1-221ENST00000600387 THOC1Q96FV9 657 aaKnown RBP20.12■□□□□ 0.81
ARHGEF1-221ENST00000600387 SETDB2Q96T68 719 aa20.12■□□□□ 0.81
ARHGEF1-221ENST00000600387 MOV10L1Q9BXT6 1211 aaKnown RBP20.12■□□□□ 0.81
ARHGEF1-221ENST00000600387 DNAJC12Q9UKB3 198 aa20.12■□□□□ 0.81
ARHGEF1-221ENST00000600387 L3MBTL1Q9Y468 752 aa20.12■□□□□ 0.81
ARHGEF1-221ENST00000600387 PCDHB13Q9Y5F0 798 aa20.12■□□□□ 0.81
ARHGEF1-221ENST00000600387 TM4SF1P30408 202 aa20.11■□□□□ 0.81
ARHGEF1-221ENST00000600387 SF3A3Q12874 501 aaKnown RBP eCLIP20.11■□□□□ 0.818e-6■□□□□ 8.5
ARHGEF1-221ENST00000600387 C11orf63Q6NUN7 778 aa20.11■□□□□ 0.81
ARHGEF1-221ENST00000600387 BARGINQ6ZT62 677 aa20.11■□□□□ 0.81
ARHGEF1-221ENST00000600387 DYDC1Q8WWB3 177 aa20.11■□□□□ 0.81
ARHGEF1-221ENST00000600387 IFT74Q96LB3 600 aa20.11■□□□□ 0.81
ARHGEF1-221ENST00000600387 CCDC113Q9H0I3 377 aa20.11■□□□□ 0.81
ARHGEF1-221ENST00000600387 THAP2Q9H0W7 228 aa20.11■□□□□ 0.81
ARHGEF1-221ENST00000600387 MYO3BQ8WXR4 1341 aa20.11■□□□□ 0.81
ARHGEF1-221ENST00000600387 IGKV6D-41A0A0C4DH26 115 aa20.11■□□□□ 0.81
ARHGEF1-221ENST00000600387 O00370 1275 aa20.11■□□□□ 0.81
ARHGEF1-221ENST00000600387 GCNT3O95395 438 aa20.11■□□□□ 0.81
ARHGEF1-221ENST00000600387 TTLL1O95922 423 aa20.11■□□□□ 0.81
ARHGEF1-221ENST00000600387 PSMC2P35998 433 aaKnown RBP20.11■□□□□ 0.81
ARHGEF1-221ENST00000600387 COPS2P61201 443 aa20.11■□□□□ 0.81
ARHGEF1-221ENST00000600387 PSMC6P62333 389 aa20.11■□□□□ 0.81
ARHGEF1-221ENST00000600387 KCNJ2P63252 427 aa20.11■□□□□ 0.81
ARHGEF1-221ENST00000600387 SATB1Q01826 763 aa20.11■□□□□ 0.81
ARHGEF1-221ENST00000600387 BNIP1Q12981 228 aa20.11■□□□□ 0.81
ARHGEF1-221ENST00000600387 ZKSCAN8Q15776 578 aaPredicted RBP20.11■□□□□ 0.81
ARHGEF1-221ENST00000600387 GPATCH4Q5T3I0 446 aaKnown RBP20.11■□□□□ 0.81
ARHGEF1-221ENST00000600387 UIMC1Q96RL1 719 aa20.11■□□□□ 0.81
ARHGEF1-221ENST00000600387 FRMPD4Q14CM0 1322 aa20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 CLIC2O15247 247 aa20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 ALDH5A1P51649 535 aaPredicted RBP20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 RHBDL3P58872 404 aa20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 NFIL3Q16649 462 aa20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 FAM186BQ8IYM0 893 aa20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 PRELID2Q8N945 189 aa20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 TMOD4Q9NZQ9 345 aa20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 PCDHA3Q9Y5H8 950 aa20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 CD2APQ9Y5K6 639 aa20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 ALG6Q9Y672 507 aa20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 PFASO15067 1338 aa20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 C10orf71Q711Q0 1435 aa20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 TULP1O00294 542 aaPredicted RBP20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 TBCAO75347 108 aaKnown RBP20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 ECM2O94769 699 aaPredicted RBP20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 ALAS1P13196 640 aa20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 FGFR4P22455 802 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms