RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 XBP1P17861 261 aa16.41■□□□□ 0.22
EBI3-202ENST00000599339 FGFR4P22455 802 aa16.41■□□□□ 0.22
EBI3-202ENST00000599339 TECP42680 631 aa16.41■□□□□ 0.22
EBI3-202ENST00000599339 ALDH7A1P49419 539 aaKnown RBP16.41■□□□□ 0.22
EBI3-202ENST00000599339 PSMC5P62195 406 aa16.41■□□□□ 0.22
EBI3-202ENST00000599339 STK3Q13188 491 aa16.41■□□□□ 0.22
EBI3-202ENST00000599339 CLLU1OSQ5K130 101 aa16.41■□□□□ 0.22
EBI3-202ENST00000599339 ZNF598Q86UK7 904 aaKnown RBP16.41■□□□□ 0.22
EBI3-202ENST00000599339 ETNPPLQ8TBG4 499 aa16.41■□□□□ 0.22
EBI3-202ENST00000599339 HELQQ8TDG4 1101 aa16.41■□□□□ 0.22
EBI3-202ENST00000599339 SUSD6Q92537 303 aa16.41■□□□□ 0.22
EBI3-202ENST00000599339 RPGRIP1Q96KN7 1286 aa16.41■□□□□ 0.22
EBI3-202ENST00000599339 MBOAT7Q96N66 472 aa16.41■□□□□ 0.22
EBI3-202ENST00000599339 PDRG1Q9NUG6 133 aa16.41■□□□□ 0.22
EBI3-202ENST00000599339 DDX25Q9UHL0 483 aaKnown RBP16.41■□□□□ 0.22
EBI3-202ENST00000599339 IGKV6-21A0A0C4DH24 114 aa16.4■□□□□ 0.22
EBI3-202ENST00000599339 CCDC194A0A1B0GVG4 234 aa16.4■□□□□ 0.22
EBI3-202ENST00000599339 MAFO75444 373 aaPredicted RBP16.4■□□□□ 0.22
EBI3-202ENST00000599339 HOXB8P17481 243 aaPredicted RBP16.4■□□□□ 0.22
EBI3-202ENST00000599339 PBX3P40426 434 aa16.4■□□□□ 0.22
EBI3-202ENST00000599339 RBM10P98175 930 aaKnown RBP16.4■□□□□ 0.22
EBI3-202ENST00000599339 DRP2Q13474 957 aa16.4■□□□□ 0.22
EBI3-202ENST00000599339 SMC1AQ14683 1233 aaKnown RBP16.4■□□□□ 0.22
EBI3-202ENST00000599339 INF2Q27J81 1249 aa16.4■□□□□ 0.22
EBI3-202ENST00000599339 TWF2Q6IBS0 349 aaKnown RBP16.4■□□□□ 0.22
EBI3-202ENST00000599339 ANKRD54Q6NXT1 300 aa16.4■□□□□ 0.22
EBI3-202ENST00000599339 B3GNT9Q6UX72 402 aa16.4■□□□□ 0.22
EBI3-202ENST00000599339 RHPN2Q8IUC4 686 aa16.4■□□□□ 0.22
EBI3-202ENST00000599339 EXOC8Q8IYI6 725 aa16.4■□□□□ 0.22
EBI3-202ENST00000599339 SLC39A11Q8N1S5 342 aa16.4■□□□□ 0.22
EBI3-202ENST00000599339 VN1R2Q8NFZ6 395 aa16.4■□□□□ 0.22
EBI3-202ENST00000599339 CASP10Q92851 521 aa16.4■□□□□ 0.22
EBI3-202ENST00000599339 TMEM169Q96HH4 297 aa16.4■□□□□ 0.22
EBI3-202ENST00000599339 FAM20AQ96MK3 541 aa16.4■□□□□ 0.22
EBI3-202ENST00000599339 SUCLA2Q9P2R7 463 aaPredicted RBP16.4■□□□□ 0.22
EBI3-202ENST00000599339 A0A087WZ62 844 aa16.39■□□□□ 0.21
EBI3-202ENST00000599339 HIDE1A8MVS5 230 aa16.39■□□□□ 0.21
EBI3-202ENST00000599339 GCFC2P16383 781 aaKnown RBP16.39■□□□□ 0.21
EBI3-202ENST00000599339 PHKA2P46019 1235 aa16.39■□□□□ 0.21
EBI3-202ENST00000599339 RAB27AP51159 221 aa16.39■□□□□ 0.21
EBI3-202ENST00000599339 LETM2Q2VYF4 491 aa16.39■□□□□ 0.21
EBI3-202ENST00000599339 TPRNQ4KMQ1 711 aa16.39■□□□□ 0.21
EBI3-202ENST00000599339 LLGL2Q6P1M3 1020 aa16.39■□□□□ 0.21
EBI3-202ENST00000599339 TRIM67Q6ZTA4 783 aa16.39■□□□□ 0.21
EBI3-202ENST00000599339 BMP8AQ7Z5Y6 402 aa16.39■□□□□ 0.21
EBI3-202ENST00000599339 TMEM87AQ8NBN3 555 aa16.39■□□□□ 0.21
EBI3-202ENST00000599339 NAP1L4Q99733 375 aaKnown RBP16.39■□□□□ 0.21
EBI3-202ENST00000599339 FDXACB1Q9BRP7 624 aaPredicted RBP16.39■□□□□ 0.21
EBI3-202ENST00000599339 LARP6Q9BRS8 491 aaKnown RBP16.39■□□□□ 0.21
EBI3-202ENST00000599339 TRAIPQ9BWF2 469 aa16.39■□□□□ 0.21
EBI3-202ENST00000599339 SLKQ9H2G2 1235 aaPredicted RBP16.39■□□□□ 0.21
EBI3-202ENST00000599339 PIN4Q9Y237 131 aaKnown RBP16.39■□□□□ 0.21
EBI3-202ENST00000599339 PPME1Q9Y570 386 aa16.39■□□□□ 0.21
EBI3-202ENST00000599339 TECTAO75443 2155 aa16.38■□□□□ 0.21
EBI3-202ENST00000599339 TMEM150BA6NC51 233 aa16.38■□□□□ 0.21
EBI3-202ENST00000599339 TMEM221A6NGB7 291 aa16.38■□□□□ 0.21
EBI3-202ENST00000599339 M0R296 226 aa16.38■□□□□ 0.21
EBI3-202ENST00000599339 MARCH6O60337 910 aa16.38■□□□□ 0.21
EBI3-202ENST00000599339 CSDE1O75534 798 aaKnown RBP16.38■□□□□ 0.21
EBI3-202ENST00000599339 STBD1O95210 358 aa16.38■□□□□ 0.21
EBI3-202ENST00000599339 CA8P35219 290 aa16.38■□□□□ 0.21
EBI3-202ENST00000599339 QARSP47897 775 aaKnown RBP16.38■□□□□ 0.21
EBI3-202ENST00000599339 ZXDAP98168 799 aa16.38■□□□□ 0.21
EBI3-202ENST00000599339 KCNC3Q14003 757 aa16.38■□□□□ 0.21
EBI3-202ENST00000599339 CES5AQ6NT32 575 aa16.38■□□□□ 0.21
EBI3-202ENST00000599339 GLB1LQ6UWU2 654 aa16.38■□□□□ 0.21
EBI3-202ENST00000599339 CATSPER4Q7RTX7 472 aa16.38■□□□□ 0.21
EBI3-202ENST00000599339 NEK8Q86SG6 692 aa16.38■□□□□ 0.21
EBI3-202ENST00000599339 MRPL43Q8N983 215 aaKnown RBP16.38■□□□□ 0.21
EBI3-202ENST00000599339 SLC7A3Q8WY07 619 aa16.38■□□□□ 0.21
EBI3-202ENST00000599339 PBXIP1Q96AQ6 731 aa16.38■□□□□ 0.21
EBI3-202ENST00000599339 FBXL18Q96ME1 805 aa16.38■□□□□ 0.21
EBI3-202ENST00000599339 NLRP4Q96MN2 994 aa16.38■□□□□ 0.21
EBI3-202ENST00000599339 AIFM3Q96NN9 605 aa16.38■□□□□ 0.21
EBI3-202ENST00000599339 CEP89Q96ST8 783 aa16.38■□□□□ 0.21
EBI3-202ENST00000599339 SH2D3AQ9BRG2 576 aa16.38■□□□□ 0.21
EBI3-202ENST00000599339 S1PR5Q9H228 398 aa16.38■□□□□ 0.21
EBI3-202ENST00000599339 CYP26B1Q9NR63 512 aa16.38■□□□□ 0.21
EBI3-202ENST00000599339 ZNF318Q5VUA4 2279 aa16.37■□□□□ 0.21
EBI3-202ENST00000599339 SLC37A4O43826 429 aa16.37■□□□□ 0.21
EBI3-202ENST00000599339 P4HBP07237 508 aaKnown RBP16.37■□□□□ 0.21
EBI3-202ENST00000599339 BCAR1P56945 870 aa16.37■□□□□ 0.21
EBI3-202ENST00000599339 PPP2R5CQ13362 524 aa16.37■□□□□ 0.21
EBI3-202ENST00000599339 NPY5RQ15761 445 aa16.37■□□□□ 0.21
EBI3-202ENST00000599339 PPP4R3AQ6IN85 833 aa16.37■□□□□ 0.21
EBI3-202ENST00000599339 SYCE2Q6PIF2 218 aa16.37■□□□□ 0.21
EBI3-202ENST00000599339 ANO5Q75V66 913 aa16.37■□□□□ 0.21
EBI3-202ENST00000599339 SUGP1Q8IWZ8 645 aaKnown RBP16.37■□□□□ 0.21
EBI3-202ENST00000599339 PGBD4Q96DM1 585 aa16.37■□□□□ 0.21
EBI3-202ENST00000599339 NECTIN4Q96NY8 510 aa16.37■□□□□ 0.21
EBI3-202ENST00000599339 PHF20Q9BVI0 1012 aa16.37■□□□□ 0.21
EBI3-202ENST00000599339 FAM105AQ9NUU6 356 aa16.37■□□□□ 0.21
EBI3-202ENST00000599339 KCNJ14Q9UNX9 436 aa16.37■□□□□ 0.21
EBI3-202ENST00000599339 C2orf71A6NGG8 1288 aa16.36■□□□□ 0.21
EBI3-202ENST00000599339 TBX3O15119 743 aa16.36■□□□□ 0.21
EBI3-202ENST00000599339 ZNF623O75123 536 aa16.36■□□□□ 0.21
EBI3-202ENST00000599339 ZC3H11AO75152 810 aaKnown RBP eCLIP16.36■□□□□ 0.21
EBI3-202ENST00000599339 RFC5P40937 340 aa16.36■□□□□ 0.21
EBI3-202ENST00000599339 POLGP54098 1239 aaPredicted RBP16.36■□□□□ 0.21
EBI3-202ENST00000599339 NHLH1Q02575 133 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms