RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 FRYLO94915 3013 aa18.58■□□□□ 0.57
SHKBP1-215ENST00000597649 EOMESO95936 686 aa18.58■□□□□ 0.56
SHKBP1-215ENST00000597649 EPCAMP16422 314 aa18.58■□□□□ 0.56
SHKBP1-215ENST00000597649 TMOD1P28289 359 aa18.58■□□□□ 0.56
SHKBP1-215ENST00000597649 CIITAP33076 1130 aa18.58■□□□□ 0.56
SHKBP1-215ENST00000597649 FAM167AQ96KS9 214 aa18.58■□□□□ 0.56
SHKBP1-215ENST00000597649 SAMM50Q9Y512 469 aa18.58■□□□□ 0.56
SHKBP1-215ENST00000597649 MYH9P35579 1960 aaKnown RBP18.57■□□□□ 0.56
SHKBP1-215ENST00000597649 ESYT2A0FGR8 921 aa18.57■□□□□ 0.56
SHKBP1-215ENST00000597649 EPB41L2O43491 1005 aaKnown RBP18.57■□□□□ 0.56
SHKBP1-215ENST00000597649 OATP04181 439 aa18.57■□□□□ 0.56
SHKBP1-215ENST00000597649 MTHFRP42898 656 aa18.57■□□□□ 0.56
SHKBP1-215ENST00000597649 ALDH7A1P49419 539 aaKnown RBP18.57■□□□□ 0.56
SHKBP1-215ENST00000597649 SETQ01105 290 aaPredicted RBP18.57■□□□□ 0.56
SHKBP1-215ENST00000597649 PRKCEQ02156 737 aa18.57■□□□□ 0.56
SHKBP1-215ENST00000597649 TSGA10IPQ3SY00 556 aa18.57■□□□□ 0.56
SHKBP1-215ENST00000597649 ZDHHC14Q8IZN3 488 aa18.57■□□□□ 0.56
SHKBP1-215ENST00000597649 VPS52Q8N1B4 723 aa18.57■□□□□ 0.56
SHKBP1-215ENST00000597649 SLC22A17Q8WUG5 538 aa18.57■□□□□ 0.56
SHKBP1-215ENST00000597649 BCL7CQ8WUZ0 217 aaPredicted RBP18.57■□□□□ 0.56
SHKBP1-215ENST00000597649 GJA10Q969M2 543 aa18.57■□□□□ 0.56
SHKBP1-215ENST00000597649 ZBP1Q9H171 429 aa18.57■□□□□ 0.56
SHKBP1-215ENST00000597649 DISC1Q9NRI5 854 aa18.57■□□□□ 0.56
SHKBP1-215ENST00000597649 NRBP2Q9NSY0 501 aa18.57■□□□□ 0.56
SHKBP1-215ENST00000597649 WDR64B1ANS9 1081 aa18.56■□□□□ 0.56
SHKBP1-215ENST00000597649 MSH4O15457 936 aa18.56■□□□□ 0.56
SHKBP1-215ENST00000597649 CA8P35219 290 aa18.56■□□□□ 0.56
SHKBP1-215ENST00000597649 TARBP2Q15633 366 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-215ENST00000597649 LONRF3Q496Y0 759 aa18.56■□□□□ 0.56
SHKBP1-215ENST00000597649 ASTLQ6HA08 431 aaPredicted RBP18.56■□□□□ 0.56
SHKBP1-215ENST00000597649 REXO1Q8N1G1 1221 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-215ENST00000597649 ZNF710Q8N1W2 664 aa18.56■□□□□ 0.56
SHKBP1-215ENST00000597649 LPPQ93052 612 aa18.56■□□□□ 0.56
SHKBP1-215ENST00000597649 CEP89Q96ST8 783 aa18.56■□□□□ 0.56
SHKBP1-215ENST00000597649 EP300Q09472 2414 aaPredicted RBP18.56■□□□□ 0.56
SHKBP1-215ENST00000597649 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-215ENST00000597649 PRR23AA6NEV1 266 aa18.55■□□□□ 0.56
SHKBP1-215ENST00000597649 MEIS3P2A8K0S8 358 aa18.55■□□□□ 0.56
SHKBP1-215ENST00000597649 STBD1O95210 358 aa18.55■□□□□ 0.56
SHKBP1-215ENST00000597649 CPA1P15085 419 aa18.55■□□□□ 0.56
SHKBP1-215ENST00000597649 NBL1P41271 181 aa18.55■□□□□ 0.56
SHKBP1-215ENST00000597649 PHKA2P46019 1235 aa18.55■□□□□ 0.56
SHKBP1-215ENST00000597649 ATAT1Q5SQI0 421 aa18.55■□□□□ 0.56
SHKBP1-215ENST00000597649 KIAA1841Q6NSI8 718 aa18.55■□□□□ 0.56
SHKBP1-215ENST00000597649 NLRP7Q8WX94 980 aa18.55■□□□□ 0.56
SHKBP1-215ENST00000597649 TMEM169Q96HH4 297 aa18.55■□□□□ 0.56
SHKBP1-215ENST00000597649 VN1R3Q9BXE9 311 aa18.55■□□□□ 0.56
SHKBP1-215ENST00000597649 NRDE2Q9H7Z3 1164 aa18.55■□□□□ 0.56
SHKBP1-215ENST00000597649 C6orf50Q9HD87 102 aa18.55■□□□□ 0.56
SHKBP1-215ENST00000597649 IRAK3Q9Y616 596 aa18.55■□□□□ 0.56
SHKBP1-215ENST00000597649 TMEM150BA6NC51 233 aa18.54■□□□□ 0.56
SHKBP1-215ENST00000597649 B4GALT3O60512 393 aa18.54■□□□□ 0.56
SHKBP1-215ENST00000597649 ZC3H11AO75152 810 aaKnown RBP eCLIP18.54■□□□□ 0.56
SHKBP1-215ENST00000597649 GALTP07902 379 aa18.54■□□□□ 0.56
SHKBP1-215ENST00000597649 CTSAP10619 480 aa18.54■□□□□ 0.56
SHKBP1-215ENST00000597649 RCAN1P53805 252 aa18.54■□□□□ 0.56
SHKBP1-215ENST00000597649 TMC5Q6UXY8 1006 aa18.54■□□□□ 0.56
SHKBP1-215ENST00000597649 DDX53Q86TM3 631 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-215ENST00000597649 TDRD5Q8NAT2 981 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-215ENST00000597649 IGSF21Q96ID5 467 aa18.54■□□□□ 0.56
SHKBP1-215ENST00000597649 SCLT1Q96NL6 688 aa18.54■□□□□ 0.56
SHKBP1-215ENST00000597649 MRPL9Q9BYD2 267 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-215ENST00000597649 UNC45AQ9H3U1 944 aa18.54■□□□□ 0.56
SHKBP1-215ENST00000597649 UPF2Q9HAU5 1272 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-215ENST00000597649 DACT1Q9NYF0 836 aa18.54■□□□□ 0.56
SHKBP1-215ENST00000597649 TCEAL9Q9UHQ7 104 aa18.54■□□□□ 0.56
SHKBP1-215ENST00000597649 DBR1Q9UK59 544 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-215ENST00000597649 NAP1L2Q9ULW6 460 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-215ENST00000597649 USTQ9Y2C2 406 aa18.54■□□□□ 0.56
SHKBP1-215ENST00000597649 DMXL1Q9Y485 3027 aa18.54■□□□□ 0.56
SHKBP1-215ENST00000597649 PRPF3O43395 683 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-215ENST00000597649 CHMP2AO43633 222 aa18.53■□□□□ 0.56
SHKBP1-215ENST00000597649 PI15O43692 258 aa18.53■□□□□ 0.56
SHKBP1-215ENST00000597649 CLCN5P51795 746 aa18.53■□□□□ 0.56
SHKBP1-215ENST00000597649 TBC1D8BQ0IIM8 1120 aa18.53■□□□□ 0.56
SHKBP1-215ENST00000597649 MCTP2Q6DN12 878 aa18.53■□□□□ 0.56
SHKBP1-215ENST00000597649 FRMD5Q7Z6J6 570 aa18.53■□□□□ 0.56
SHKBP1-215ENST00000597649 PHKBQ93100 1093 aa18.53■□□□□ 0.56
SHKBP1-215ENST00000597649 SH2D3AQ9BRG2 576 aa18.53■□□□□ 0.56
SHKBP1-215ENST00000597649 TRAIPQ9BWF2 469 aa18.53■□□□□ 0.56
SHKBP1-215ENST00000597649 CHST12Q9NRB3 414 aa18.53■□□□□ 0.56
SHKBP1-215ENST00000597649 TBC1D13Q9NVG8 400 aa18.53■□□□□ 0.56
SHKBP1-215ENST00000597649 DZANK1Q9NVP4 752 aa18.53■□□□□ 0.56
SHKBP1-215ENST00000597649 DNAJB4Q9UDY4 337 aa18.53■□□□□ 0.56
SHKBP1-215ENST00000597649 DNAH14Q0VDD8 3507 aa18.53■□□□□ 0.56
SHKBP1-215ENST00000597649 A0A087WZ62 844 aa18.52■□□□□ 0.56
SHKBP1-215ENST00000597649 IGKV6-21A0A0C4DH24 114 aa18.52■□□□□ 0.56
SHKBP1-215ENST00000597649 OFD1O75665 1012 aa18.52■□□□□ 0.56
SHKBP1-215ENST00000597649 SEC24BO95487 1268 aa18.52■□□□□ 0.56
SHKBP1-215ENST00000597649 NPR3P17342 541 aa18.52■□□□□ 0.56
SHKBP1-215ENST00000597649 GNA11P29992 359 aa18.52■□□□□ 0.56
SHKBP1-215ENST00000597649 HSPA4P34932 840 aa18.52■□□□□ 0.56
SHKBP1-215ENST00000597649 POLGP54098 1239 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-215ENST00000597649 CWF19L1Q69YN2 538 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-215ENST00000597649 ZNF280BQ86YH2 543 aa18.52■□□□□ 0.56
SHKBP1-215ENST00000597649 PLCD3Q8N3E9 789 aa18.52■□□□□ 0.56
SHKBP1-215ENST00000597649 SLC5A5Q92911 643 aa18.52■□□□□ 0.56
SHKBP1-215ENST00000597649 FDXACB1Q9BRP7 624 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-215ENST00000597649 NIFKQ9BYG3 293 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-215ENST00000597649 GCOM2Q9BZD3 368 aaPredicted RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms