RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 CCND1P24385 295 aa13.6□□□□□ -0.23
ZNF558-205ENST00000597304 RFC4P35249 363 aa13.6□□□□□ -0.23
ZNF558-205ENST00000597304 RPL21P46778 160 aaKnown RBP13.6□□□□□ -0.23
ZNF558-205ENST00000597304 CASP4P49662 377 aa13.6□□□□□ -0.23
ZNF558-205ENST00000597304 IRX1P78414 480 aaPredicted RBP13.6□□□□□ -0.23
ZNF558-205ENST00000597304 SLAIN2Q9P270 581 aa13.6□□□□□ -0.23
ZNF558-205ENST00000597304 GGT7Q9UJ14 662 aa13.6□□□□□ -0.23
ZNF558-205ENST00000597304 WNK3Q9BYP7 1800 aa13.6□□□□□ -0.23
ZNF558-205ENST00000597304 ASTN1O14525 1302 aa13.6□□□□□ -0.23
ZNF558-205ENST00000597304 SKAP2O75563 359 aaPredicted RBP13.6□□□□□ -0.23
ZNF558-205ENST00000597304 STAT3P40763 770 aa13.6□□□□□ -0.23
ZNF558-205ENST00000597304 PTGIRP43119 386 aa13.6□□□□□ -0.23
ZNF558-205ENST00000597304 AUHQ13825 339 aaKnown RBP13.6□□□□□ -0.23
ZNF558-205ENST00000597304 TNFAIP8L3Q5GJ75 292 aa13.6□□□□□ -0.23
ZNF558-205ENST00000597304 UBAP2Q5T6F2 1119 aaKnown RBP13.6□□□□□ -0.23
ZNF558-205ENST00000597304 BARGINQ6ZT62 677 aa13.6□□□□□ -0.23
ZNF558-205ENST00000597304 ALG3Q92685 438 aa13.6□□□□□ -0.23
ZNF558-205ENST00000597304 KLHL29Q96CT2 875 aa13.6□□□□□ -0.23
ZNF558-205ENST00000597304 ARHGEF26Q96DR7 871 aa13.6□□□□□ -0.23
ZNF558-205ENST00000597304 REEP2Q9BRK0 252 aa13.6□□□□□ -0.23
ZNF558-205ENST00000597304 TMOD4Q9NZQ9 345 aa13.6□□□□□ -0.23
ZNF558-205ENST00000597304 TNRC6CQ9HCJ0 1690 aaKnown RBP13.59□□□□□ -0.23
ZNF558-205ENST00000597304 DIAPH2O60879 1101 aa13.59□□□□□ -0.23
ZNF558-205ENST00000597304 CALRP27797 417 aaKnown RBP13.59□□□□□ -0.23
ZNF558-205ENST00000597304 COPS2P61201 443 aa13.59□□□□□ -0.23
ZNF558-205ENST00000597304 GALNTL6Q49A17 601 aa13.59□□□□□ -0.23
ZNF558-205ENST00000597304 CCDC38Q502W7 563 aa13.59□□□□□ -0.23
ZNF558-205ENST00000597304 IFT74Q96LB3 600 aa13.59□□□□□ -0.23
ZNF558-205ENST00000597304 ZNF570Q96NI8 536 aa13.59□□□□□ -0.23
ZNF558-205ENST00000597304 JMJD4Q9H9V9 463 aa13.59□□□□□ -0.23
ZNF558-205ENST00000597304 FGFR1OP2Q9NVK5 253 aa13.59□□□□□ -0.23
ZNF558-205ENST00000597304 PCDHB13Q9Y5F0 798 aa13.59□□□□□ -0.23
ZNF558-205ENST00000597304 PPP1R11O60927 126 aaPredicted RBP13.59□□□□□ -0.23
ZNF558-205ENST00000597304 MAP2K1Q02750 393 aaPredicted RBP13.59□□□□□ -0.23
ZNF558-205ENST00000597304 PABPC4Q13310 644 aaKnown RBP eCLIP13.59□□□□□ -0.23
ZNF558-205ENST00000597304 DRAP1Q14919 205 aaPredicted RBP13.59□□□□□ -0.23
ZNF558-205ENST00000597304 NAIF1Q69YI7 327 aaPredicted RBP13.59□□□□□ -0.23
ZNF558-205ENST00000597304 MFSD5Q6N075 450 aa13.59□□□□□ -0.23
ZNF558-205ENST00000597304 DHX37Q8IY37 1157 aaKnown RBP13.59□□□□□ -0.23
ZNF558-205ENST00000597304 ADGRF4Q8IZF3 695 aa13.59□□□□□ -0.23
ZNF558-205ENST00000597304 SPDL1Q96EA4 605 aa13.59□□□□□ -0.23
ZNF558-205ENST00000597304 RUNDC3BQ96NL0 473 aa13.59□□□□□ -0.23
ZNF558-205ENST00000597304 STK33Q9BYT3 514 aa13.59□□□□□ -0.23
ZNF558-205ENST00000597304 THAP2Q9H0W7 228 aa13.59□□□□□ -0.23
ZNF558-205ENST00000597304 TAOK3Q9H2K8 898 aa13.59□□□□□ -0.23
ZNF558-205ENST00000597304 SEPT11Q9NVA2 429 aaKnown RBP13.59□□□□□ -0.23
ZNF558-205ENST00000597304 PCYOX1Q9UHG3 505 aa13.59□□□□□ -0.23
ZNF558-205ENST00000597304 DBR1Q9UK59 544 aaKnown RBP13.59□□□□□ -0.23
ZNF558-205ENST00000597304 TCP11X1B4DZS4 312 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 KIF3CO14782 793 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 CLIC2O15247 247 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 SNHG28P0DPA3 235 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 RARGP13631 454 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 PLCG2P16885 1265 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 TRHP20396 242 aaPredicted RBP13.58□□□□□ -0.24
ZNF558-205ENST00000597304 GCKP35557 465 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 BNIP1Q12981 228 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 LRRC14Q15048 493 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 BMT2Q1RMZ1 405 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 AADACL2Q6P093 401 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 UBL4BQ8N7F7 174 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 MGARPQ8TDB4 240 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 PRCCQ92733 491 aaPredicted RBP13.58□□□□□ -0.24
ZNF558-205ENST00000597304 PSTPIP2Q9H939 334 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 MTMR4Q9NYA4 1195 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 DNAJC12Q9UKB3 198 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 ANKRD62A6NC57 917 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 MIF4GDA9UHW6 222 aaKnown RBP13.58□□□□□ -0.24
ZNF558-205ENST00000597304 O00370 1275 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 GCNT3O95395 438 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 KRT16P08779 473 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 TNFAIP3P21580 790 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 EIF6P56537 245 aaKnown RBP13.58□□□□□ -0.24
ZNF558-205ENST00000597304 TBC1D9BQ66K14 1250 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 CCDC137Q6PK04 289 aaKnown RBP13.58□□□□□ -0.24
ZNF558-205ENST00000597304 EXOC3L1Q86VI1 746 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 SLFN12Q8IYM2 578 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 PRELID2Q8N945 189 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 SYT2Q8N9I0 419 aaPredicted RBP13.58□□□□□ -0.24
ZNF558-205ENST00000597304 PLCD4Q9BRC7 762 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 ROPN1BQ9BZX4 212 aaPredicted RBP13.58□□□□□ -0.24
ZNF558-205ENST00000597304 NYXQ9GZU5 481 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 ROPN1Q9HAT0 212 aaPredicted RBP13.58□□□□□ -0.24
ZNF558-205ENST00000597304 DNM3Q9UQ16 869 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 STK38LQ9Y2H1 464 aa13.58□□□□□ -0.24
ZNF558-205ENST00000597304 PLIN4Q96Q06 1357 aa13.57□□□□□ -0.24
ZNF558-205ENST00000597304 FAM170AA1A519 330 aa13.57□□□□□ -0.24
ZNF558-205ENST00000597304 MEIS1O00470 390 aa13.57□□□□□ -0.24
ZNF558-205ENST00000597304 CTNNA2P26232 953 aa13.57□□□□□ -0.24
ZNF558-205ENST00000597304 PSMC6P62333 389 aa13.57□□□□□ -0.24
ZNF558-205ENST00000597304 LACTBP83111 547 aaPredicted RBP13.57□□□□□ -0.24
ZNF558-205ENST00000597304 NUGGCQ68CJ6 796 aa13.57□□□□□ -0.24
ZNF558-205ENST00000597304 CATSPER3Q86XQ3 398 aa13.57□□□□□ -0.24
ZNF558-205ENST00000597304 RHOT2Q8IXI1 618 aa13.57□□□□□ -0.24
ZNF558-205ENST00000597304 KIF2BQ8N4N8 673 aa13.57□□□□□ -0.24
ZNF558-205ENST00000597304 ERMNQ8TAM6 284 aa13.57□□□□□ -0.24
ZNF558-205ENST00000597304 TBC1D16Q8TBP0 767 aa13.57□□□□□ -0.24
ZNF558-205ENST00000597304 SYT11Q9BT88 431 aa13.57□□□□□ -0.24
ZNF558-205ENST00000597304 ANKIB1Q9P2G1 1089 aa13.57□□□□□ -0.24
ZNF558-205ENST00000597304 COG5Q9UP83 839 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms