RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 SRGAP1Q7Z6B7 1085 aa19.33■□□□□ 0.68
IRF3-208ENST00000594387 KSR1Q8IVT5 923 aa19.33■□□□□ 0.68
IRF3-208ENST00000594387 ZNF579Q8NAF0 562 aaKnown RBP19.33■□□□□ 0.68
IRF3-208ENST00000594387 RNF169Q8NCN4 708 aa19.33■□□□□ 0.68
IRF3-208ENST00000594387 CLP1Q92989 425 aaKnown RBP19.33■□□□□ 0.68
IRF3-208ENST00000594387 MRPL38Q96DV4 380 aaKnown RBP19.33■□□□□ 0.68
IRF3-208ENST00000594387 POLR3CQ9BUI4 534 aaPredicted RBP19.33■□□□□ 0.68
IRF3-208ENST00000594387 LMAN2LQ9H0V9 348 aa19.33■□□□□ 0.68
IRF3-208ENST00000594387 RC3H2Q9HBD1 1191 aaKnown RBP19.33■□□□□ 0.68
IRF3-208ENST00000594387 LRWD1Q9UFC0 647 aa19.33■□□□□ 0.68
IRF3-208ENST00000594387 PCDHB12Q9Y5F1 795 aa19.33■□□□□ 0.68
IRF3-208ENST00000594387 C5orf67F2Z3F1 127 aa19.32■□□□□ 0.68
IRF3-208ENST00000594387 ZBTB39O15060 712 aa19.32■□□□□ 0.68
IRF3-208ENST00000594387 EOMESO95936 686 aa19.32■□□□□ 0.68
IRF3-208ENST00000594387 FGFR4P22455 802 aa19.32■□□□□ 0.68
IRF3-208ENST00000594387 PHKA2P46019 1235 aa19.32■□□□□ 0.68
IRF3-208ENST00000594387 LAMTOR4Q0VGL1 99 aa19.32■□□□□ 0.68
IRF3-208ENST00000594387 PTGDRQ13258 359 aa19.32■□□□□ 0.68
IRF3-208ENST00000594387 TIGD5Q53EQ6 642 aa19.32■□□□□ 0.68
IRF3-208ENST00000594387 FERMT3Q86UX7 667 aa19.32■□□□□ 0.68
IRF3-208ENST00000594387 CATSPER3Q86XQ3 398 aa19.32■□□□□ 0.68
IRF3-208ENST00000594387 CRIPAKQ8N1N5 446 aa19.32■□□□□ 0.68
IRF3-208ENST00000594387 PIGOQ8TEQ8 1089 aa19.32■□□□□ 0.68
IRF3-208ENST00000594387 PRDM6Q9NQX0 595 aa19.32■□□□□ 0.68
IRF3-208ENST00000594387 PIN4Q9Y237 131 aaKnown RBP19.32■□□□□ 0.68
IRF3-208ENST00000594387 MRPL42Q9Y6G3 142 aaKnown RBP19.32■□□□□ 0.68
IRF3-208ENST00000594387 CSDE1O75534 798 aaKnown RBP19.31■□□□□ 0.68
IRF3-208ENST00000594387 ERLIN2O94905 339 aa19.31■□□□□ 0.68
IRF3-208ENST00000594387 MUTP22033 750 aa19.31■□□□□ 0.68
IRF3-208ENST00000594387 RPA1P27694 616 aa19.31■□□□□ 0.68
IRF3-208ENST00000594387 CCT6AP40227 531 aaKnown RBP19.31■□□□□ 0.68
IRF3-208ENST00000594387 RARRES1P49788 294 aa19.31■□□□□ 0.68
IRF3-208ENST00000594387 PDIA5Q14554 519 aa19.31■□□□□ 0.68
IRF3-208ENST00000594387 CSPP1Q1MSJ5 1256 aa19.31■□□□□ 0.68
IRF3-208ENST00000594387 TJAP1Q5JTD0 557 aa19.31■□□□□ 0.68
IRF3-208ENST00000594387 FAM102BQ5T8I3 360 aa19.31■□□□□ 0.68
IRF3-208ENST00000594387 DTHD1Q6ZMT9 781 aa19.31■□□□□ 0.68
IRF3-208ENST00000594387 ECHDC2Q86YB7 292 aa19.31■□□□□ 0.68
IRF3-208ENST00000594387 RNF149Q8NC42 400 aa19.31■□□□□ 0.68
IRF3-208ENST00000594387 P2RX5Q93086 422 aa19.31■□□□□ 0.68
IRF3-208ENST00000594387 HLA-CQ95604 372 aa19.31■□□□□ 0.68
IRF3-208ENST00000594387 TMEM117Q9H0C3 514 aa19.31■□□□□ 0.68
IRF3-208ENST00000594387 GTF3C3Q9Y5Q9 886 aa19.31■□□□□ 0.68
IRF3-208ENST00000594387 TCF20Q9UGU0 1960 aaKnown RBP19.3■□□□□ 0.68
IRF3-208ENST00000594387 A0A0U1RQF3 1178 aa19.3■□□□□ 0.68
IRF3-208ENST00000594387 PDCP20941 246 aa19.3■□□□□ 0.68
IRF3-208ENST00000594387 FXR2P51116 673 aaKnown RBP eCLIP19.3■□□□□ 0.68
IRF3-208ENST00000594387 RAB27AP51159 221 aa19.3■□□□□ 0.68
IRF3-208ENST00000594387 NBR1Q14596 966 aa19.3■□□□□ 0.68
IRF3-208ENST00000594387 PCBP1Q15365 356 aaKnown RBP eCLIP19.3■□□□□ 0.68
IRF3-208ENST00000594387 MCPH1Q8NEM0 835 aa19.3■□□□□ 0.68
IRF3-208ENST00000594387 PPP2R3CQ969Q6 453 aa19.3■□□□□ 0.68
IRF3-208ENST00000594387 DBR1Q9UK59 544 aaKnown RBP19.3■□□□□ 0.68
IRF3-208ENST00000594387 PCDHB6Q9Y5E3 794 aa19.3■□□□□ 0.68
IRF3-208ENST00000594387 MYH11P35749 1972 aa19.3■□□□□ 0.68
IRF3-208ENST00000594387 PLXNA4Q9HCM2 1894 aa19.29■□□□□ 0.68
IRF3-208ENST00000594387 ARHGEF35A5YM69 484 aa19.29■□□□□ 0.68
IRF3-208ENST00000594387 USO1O60763 962 aaKnown RBP19.29■□□□□ 0.68
IRF3-208ENST00000594387 MED24O75448 989 aa19.29■□□□□ 0.68
IRF3-208ENST00000594387 SPATA31C1P0DKV0 1188 aa19.29■□□□□ 0.68
IRF3-208ENST00000594387 PRPHP41219 470 aa19.29■□□□□ 0.68
IRF3-208ENST00000594387 GATMP50440 423 aa19.29■□□□□ 0.68
IRF3-208ENST00000594387 TOB1P50616 345 aaPredicted RBP19.29■□□□□ 0.68
IRF3-208ENST00000594387 KRT79Q5XKE5 535 aa19.29■□□□□ 0.68
IRF3-208ENST00000594387 RSPH1Q8WYR4 309 aa19.29■□□□□ 0.68
IRF3-208ENST00000594387 PGBD4Q96DM1 585 aa19.29■□□□□ 0.68
IRF3-208ENST00000594387 ASB2Q96Q27 587 aa19.29■□□□□ 0.68
IRF3-208ENST00000594387 NSUN3Q9H649 340 aaKnown RBP19.29■□□□□ 0.68
IRF3-208ENST00000594387 IFT122Q9HBG6 1241 aa19.29■□□□□ 0.68
IRF3-208ENST00000594387 FGFR1P11362 822 aa19.28■□□□□ 0.68
IRF3-208ENST00000594387 LAG3P18627 525 aa19.28■□□□□ 0.68
IRF3-208ENST00000594387 POU5F1BQ06416 359 aa19.28■□□□□ 0.68
IRF3-208ENST00000594387 LRRC43Q8N309 656 aa19.28■□□□□ 0.68
IRF3-208ENST00000594387 MRPL9Q9BYD2 267 aaKnown RBP19.28■□□□□ 0.68
IRF3-208ENST00000594387 TYW1Q9NV66 732 aaKnown RBP19.28■□□□□ 0.68
IRF3-208ENST00000594387 A0A087WWV3 80 aa19.27■□□□□ 0.68
IRF3-208ENST00000594387 INO80B-WBP1J3KQ70 363 aa19.27■□□□□ 0.68
IRF3-208ENST00000594387 NCK2O43639 380 aa19.27■□□□□ 0.68
IRF3-208ENST00000594387 AXLP30530 894 aa19.27■□□□□ 0.68
IRF3-208ENST00000594387 POTEGQ6S5H5 508 aa19.27■□□□□ 0.68
IRF3-208ENST00000594387 MAEAQ7L5Y9 396 aa19.27■□□□□ 0.68
IRF3-208ENST00000594387 THNSL1Q8IYQ7 743 aa19.27■□□□□ 0.68
IRF3-208ENST00000594387 C4orf32Q8N8J7 132 aa19.27■□□□□ 0.68
IRF3-208ENST00000594387 KLHL23Q8NBE8 558 aa19.27■□□□□ 0.68
IRF3-208ENST00000594387 SNX29Q8TEQ0 813 aa19.27■□□□□ 0.68
IRF3-208ENST00000594387 POLR3FQ9H1D9 316 aaPredicted RBP19.27■□□□□ 0.68
IRF3-208ENST00000594387 ALG13Q9NP73 1137 aaKnown RBP19.27■□□□□ 0.68
IRF3-208ENST00000594387 XPNPEP1Q9NQW7 623 aa19.27■□□□□ 0.68
IRF3-208ENST00000594387 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.27■□□□□ 0.68
IRF3-208ENST00000594387 FAM105AQ9NUU6 356 aa19.27■□□□□ 0.68
IRF3-208ENST00000594387 PLAGL2Q9UPG8 496 aa19.27■□□□□ 0.68
IRF3-208ENST00000594387 ATG2AQ2TAZ0 1938 aa19.27■□□□□ 0.67
IRF3-208ENST00000594387 TDRD15B5MCY1 1934 aaKnown RBP19.26■□□□□ 0.67
IRF3-208ENST00000594387 VPS37CA5D8V6 355 aaPredicted RBP19.26■□□□□ 0.67
IRF3-208ENST00000594387 CARNS1A5YM72 827 aa19.26■□□□□ 0.67
IRF3-208ENST00000594387 GRM6O15303 877 aa19.26■□□□□ 0.67
IRF3-208ENST00000594387 PTENP60484 403 aa19.26■□□□□ 0.67
IRF3-208ENST00000594387 PADI6Q6TGC4 694 aa19.26■□□□□ 0.67
IRF3-208ENST00000594387 EP400NLQ6ZTU2 488 aa19.26■□□□□ 0.67
IRF3-208ENST00000594387 BRAPQ7Z569 592 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms