RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 MTG2Q9H4K7 406 aa8.04□□□□□ -1.12
VMP1-215ENST00000592619 GOLGA2P5Q9HBQ8 144 aa8.04□□□□□ -1.12
VMP1-215ENST00000592619 ZFP64Q9NPA5 681 aa8.04□□□□□ -1.12
VMP1-215ENST00000592619 DDX20Q9UHI6 824 aaKnown RBP8.04□□□□□ -1.12
VMP1-215ENST00000592619 CUX2O14529 1486 aa8.04□□□□□ -1.12
VMP1-215ENST00000592619 FANCD2Q9BXW9 1451 aa8.04□□□□□ -1.12
VMP1-215ENST00000592619 CEP164Q9UPV0 1460 aa8.04□□□□□ -1.12
VMP1-215ENST00000592619 ANO9A1A5B4 782 aa8.03□□□□□ -1.12
VMP1-215ENST00000592619 OPHN1O60890 802 aa8.03□□□□□ -1.12
VMP1-215ENST00000592619 EIF3JO75822 258 aaKnown RBP8.03□□□□□ -1.12
VMP1-215ENST00000592619 PCDH8O95206 1070 aa8.03□□□□□ -1.12
VMP1-215ENST00000592619 PDCP20941 246 aa8.03□□□□□ -1.12
VMP1-215ENST00000592619 FBLN1P23142 703 aa8.03□□□□□ -1.12
VMP1-215ENST00000592619 WASP42768 502 aa8.03□□□□□ -1.12
VMP1-215ENST00000592619 CACNB2Q08289 660 aaPredicted RBP8.03□□□□□ -1.12
VMP1-215ENST00000592619 GALEQ14376 348 aa8.03□□□□□ -1.12
VMP1-215ENST00000592619 ZNF267Q14586 743 aaPredicted RBP8.03□□□□□ -1.12
VMP1-215ENST00000592619 STILQ15468 1287 aa8.03□□□□□ -1.12
VMP1-215ENST00000592619 GORABQ5T7V8 394 aa8.03□□□□□ -1.12
VMP1-215ENST00000592619 LRSAM1Q6UWE0 723 aa8.03□□□□□ -1.12
VMP1-215ENST00000592619 USP45Q70EL2 814 aa8.03□□□□□ -1.12
VMP1-215ENST00000592619 DTX3Q8N9I9 347 aa8.03□□□□□ -1.12
VMP1-215ENST00000592619 DIS3LQ8TF46 1054 aaKnown RBP8.03□□□□□ -1.12
VMP1-215ENST00000592619 FATE1Q969F0 183 aa8.03□□□□□ -1.12
VMP1-215ENST00000592619 FAM193BQ96PV7 902 aaPredicted RBP8.03□□□□□ -1.12
VMP1-215ENST00000592619 MAP3K14Q99558 947 aa8.03□□□□□ -1.12
VMP1-215ENST00000592619 ACE2Q9BYF1 805 aaPredicted RBP8.03□□□□□ -1.12
VMP1-215ENST00000592619 DLL4Q9NR61 685 aa8.03□□□□□ -1.12
VMP1-215ENST00000592619 KCMF1Q9P0J7 381 aa8.03□□□□□ -1.12
VMP1-215ENST00000592619 SERPINB13Q9UIV8 391 aa8.03□□□□□ -1.12
VMP1-215ENST00000592619 PCDHB6Q9Y5E3 794 aa8.03□□□□□ -1.12
VMP1-215ENST00000592619 COMMD10Q9Y6G5 202 aa8.03□□□□□ -1.12
VMP1-215ENST00000592619 NCAM1P13591 858 aa8.02□□□□□ -1.13
VMP1-215ENST00000592619 NFATC3Q12968 1075 aa8.02□□□□□ -1.13
VMP1-215ENST00000592619 MALLQ13021 153 aa8.02□□□□□ -1.13
VMP1-215ENST00000592619 OS9Q13438 667 aaPredicted RBP8.02□□□□□ -1.13
VMP1-215ENST00000592619 CD300LDQ6UXZ3 194 aa8.02□□□□□ -1.13
VMP1-215ENST00000592619 CATIPQ7Z7H3 387 aa8.02□□□□□ -1.13
VMP1-215ENST00000592619 SMC5Q8IY18 1101 aa8.02□□□□□ -1.13
VMP1-215ENST00000592619 ABI1Q8IZP0 508 aa8.02□□□□□ -1.13
VMP1-215ENST00000592619 FAM26EQ8N5C1 309 aa8.02□□□□□ -1.13
VMP1-215ENST00000592619 PPM1NQ8N819 430 aa8.02□□□□□ -1.13
VMP1-215ENST00000592619 CDYL2Q8N8U2 506 aa8.02□□□□□ -1.13
VMP1-215ENST00000592619 GAB3Q8WWW8 586 aa8.02□□□□□ -1.13
VMP1-215ENST00000592619 C1GALT1C1Q96EU7 318 aa8.02□□□□□ -1.13
VMP1-215ENST00000592619 TMEM209Q96SK2 561 aa8.02□□□□□ -1.13
VMP1-215ENST00000592619 ZNF552Q9H707 407 aaPredicted RBP8.02□□□□□ -1.13
VMP1-215ENST00000592619 RBPJLQ9UBG7 517 aa8.02□□□□□ -1.13
VMP1-215ENST00000592619 FTSJ1Q9UET6 329 aa8.02□□□□□ -1.13
VMP1-215ENST00000592619 IRS2Q9Y4H2 1338 aa8.02□□□□□ -1.13
VMP1-215ENST00000592619 MRC2Q9UBG0 1479 aa8.01□□□□□ -1.13
VMP1-215ENST00000592619 GLI1P08151 1106 aa8.01□□□□□ -1.13
VMP1-215ENST00000592619 CELA3BP08861 270 aa8.01□□□□□ -1.13
VMP1-215ENST00000592619 CDK17Q00537 523 aa8.01□□□□□ -1.13
VMP1-215ENST00000592619 PPARAQ07869 468 aa8.01□□□□□ -1.13
VMP1-215ENST00000592619 LRP8Q14114 963 aa8.01□□□□□ -1.13
VMP1-215ENST00000592619 BRD3Q15059 726 aa8.01□□□□□ -1.13
VMP1-215ENST00000592619 ADRM1Q16186 407 aa8.01□□□□□ -1.13
VMP1-215ENST00000592619 SKIDA1Q1XH10 827 aa8.01□□□□□ -1.13
VMP1-215ENST00000592619 UAP1L1Q3KQV9 507 aa8.01□□□□□ -1.13
VMP1-215ENST00000592619 KANK2Q63ZY3 851 aa8.01□□□□□ -1.13
VMP1-215ENST00000592619 CXXC5Q7LFL8 322 aaKnown RBP8.01□□□□□ -1.13
VMP1-215ENST00000592619 TMC6Q7Z403 805 aa8.01□□□□□ -1.13
VMP1-215ENST00000592619 BMP8AQ7Z5Y6 402 aa8.01□□□□□ -1.13
VMP1-215ENST00000592619 SRGAP1Q7Z6B7 1085 aa8.01□□□□□ -1.13
VMP1-215ENST00000592619 EXOC8Q8IYI6 725 aa8.01□□□□□ -1.13
VMP1-215ENST00000592619 MVB12AQ96EY5 273 aa8.01□□□□□ -1.13
VMP1-215ENST00000592619 ACO2Q99798 780 aaKnown RBP8.01□□□□□ -1.13
VMP1-215ENST00000592619 HAPLN2Q9GZV7 340 aa8.01□□□□□ -1.13
VMP1-215ENST00000592619 PCDH18Q9HCL0 1135 aa8.01□□□□□ -1.13
VMP1-215ENST00000592619 PLA2G2DQ9UNK4 145 aa8.01□□□□□ -1.13
VMP1-215ENST00000592619 DNM3Q9UQ16 869 aa8.01□□□□□ -1.13
VMP1-215ENST00000592619 WDR62O43379 1518 aa8.01□□□□□ -1.13
VMP1-215ENST00000592619 H3BML4 177 aa8□□□□□ -1.13
VMP1-215ENST00000592619 CUTAO60888 179 aa8□□□□□ -1.13
VMP1-215ENST00000592619 HRGP04196 525 aa8□□□□□ -1.13
VMP1-215ENST00000592619 C8BP07358 591 aa8□□□□□ -1.13
VMP1-215ENST00000592619 NBPF7P0C2Y1 421 aaPredicted RBP8□□□□□ -1.13
VMP1-215ENST00000592619 USP14P54578 494 aa8□□□□□ -1.13
VMP1-215ENST00000592619 ZNF200P98182 395 aaPredicted RBP8□□□□□ -1.13
VMP1-215ENST00000592619 SAFBQ15424 915 aaKnown RBP eCLIP8□□□□□ -1.13
VMP1-215ENST00000592619 VPS72Q15906 364 aa8□□□□□ -1.13
VMP1-215ENST00000592619 CBLL1Q75N03 491 aa8□□□□□ -1.13
VMP1-215ENST00000592619 WDR48Q8TAF3 677 aa8□□□□□ -1.13
VMP1-215ENST00000592619 HIST1H2AHQ96KK5 128 aa8□□□□□ -1.13
VMP1-215ENST00000592619 HIST1H2AJQ99878 128 aa8□□□□□ -1.13
VMP1-215ENST00000592619 USP25Q9UHP3 1055 aa8□□□□□ -1.13
VMP1-215ENST00000592619 EVLQ9UI08 416 aaPredicted RBP8□□□□□ -1.13
VMP1-215ENST00000592619 SCOCQ9UIL1 159 aa8□□□□□ -1.13
VMP1-215ENST00000592619 USP18Q9UMW8 372 aa8□□□□□ -1.13
VMP1-215ENST00000592619 HYAL3O43820 417 aaPredicted RBP7.99□□□□□ -1.13
VMP1-215ENST00000592619 NRP2O60462 931 aa7.99□□□□□ -1.13
VMP1-215ENST00000592619 DTNBO60941 627 aa7.99□□□□□ -1.13
VMP1-215ENST00000592619 EDNRBP24530 442 aa7.99□□□□□ -1.13
VMP1-215ENST00000592619 VIPR1P32241 457 aa7.99□□□□□ -1.13
VMP1-215ENST00000592619 PICALMQ13492 652 aa7.99□□□□□ -1.13
VMP1-215ENST00000592619 TARBP2Q15633 366 aaKnown RBP7.99□□□□□ -1.13
VMP1-215ENST00000592619 COBLL1Q53SF7 1204 aa7.99□□□□□ -1.13
VMP1-215ENST00000592619 MUM1L1Q5H9M0 696 aa7.99□□□□□ -1.13
VMP1-215ENST00000592619 BTNL9Q6UXG8 535 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms