RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 HGSNATQ68CP4 663 aa11.34□□□□□ -0.59
VPS25-206ENST00000591584 SMYD5Q6GMV2 418 aa11.34□□□□□ -0.59
VPS25-206ENST00000591584 DPY19L2P1Q6NXN4 242 aa11.34□□□□□ -0.59
VPS25-206ENST00000591584 SRGAP1Q7Z6B7 1085 aa11.34□□□□□ -0.59
VPS25-206ENST00000591584 MAP4K3Q8IVH8 894 aa11.34□□□□□ -0.59
VPS25-206ENST00000591584 CCDC155Q8N6L0 562 aa11.34□□□□□ -0.59
VPS25-206ENST00000591584 GPR161Q8N6U8 529 aaKnown RBP11.34□□□□□ -0.59
VPS25-206ENST00000591584 OTUD5Q96G74 571 aa11.34□□□□□ -0.59
VPS25-206ENST00000591584 FAM167AQ96KS9 214 aa11.34□□□□□ -0.59
VPS25-206ENST00000591584 CALR3Q96L12 384 aaKnown RBP11.34□□□□□ -0.59
VPS25-206ENST00000591584 FAM81BQ96LP2 452 aa11.34□□□□□ -0.59
VPS25-206ENST00000591584 CARD6Q9BX69 1037 aa11.34□□□□□ -0.59
VPS25-206ENST00000591584 STK33Q9BYT3 514 aa11.34□□□□□ -0.59
VPS25-206ENST00000591584 KIAA1586Q9HCI6 787 aa11.34□□□□□ -0.59
VPS25-206ENST00000591584 NLRC4Q9NPP4 1024 aa11.34□□□□□ -0.59
VPS25-206ENST00000591584 KMT5AQ9NQR1 393 aa11.34□□□□□ -0.59
VPS25-206ENST00000591584 CYP26B1Q9NR63 512 aa11.34□□□□□ -0.59
VPS25-206ENST00000591584 TBX20Q9UMR3 447 aa11.34□□□□□ -0.59
VPS25-206ENST00000591584 USP20Q9Y2K6 914 aa11.34□□□□□ -0.59
VPS25-206ENST00000591584 JRKLQ9Y4A0 524 aa11.34□□□□□ -0.59
VPS25-206ENST00000591584 IGSF9BQ9UPX0 1349 aa11.34□□□□□ -0.59
VPS25-206ENST00000591584 CCDC169A6NNP5 214 aa11.33□□□□□ -0.6
VPS25-206ENST00000591584 TADA3O75528 432 aa11.33□□□□□ -0.6
VPS25-206ENST00000591584 ERCC3P19447 782 aa11.33□□□□□ -0.6
VPS25-206ENST00000591584 GARTP22102 1010 aa11.33□□□□□ -0.6
VPS25-206ENST00000591584 GTF2H1P32780 548 aa11.33□□□□□ -0.6
VPS25-206ENST00000591584 NPTX2P47972 431 aa11.33□□□□□ -0.6
VPS25-206ENST00000591584 CKAP4Q07065 602 aaKnown RBP11.33□□□□□ -0.6
VPS25-206ENST00000591584 KCTD2Q14681 263 aa11.33□□□□□ -0.6
VPS25-206ENST00000591584 IFI16Q16666 785 aaKnown RBP11.33□□□□□ -0.6
VPS25-206ENST00000591584 UGCGQ16739 394 aa11.33□□□□□ -0.6
VPS25-206ENST00000591584 METTL7BQ6UX53 244 aa11.33□□□□□ -0.6
VPS25-206ENST00000591584 TMEM161BQ8NDZ6 487 aa11.33□□□□□ -0.6
VPS25-206ENST00000591584 AFAP1L1Q8TED9 768 aa11.33□□□□□ -0.6
VPS25-206ENST00000591584 SEPT1Q8WYJ6 367 aa11.33□□□□□ -0.6
VPS25-206ENST00000591584 RABGGTAQ92696 567 aa11.33□□□□□ -0.6
VPS25-206ENST00000591584 GOLGA1Q92805 767 aa11.33□□□□□ -0.6
VPS25-206ENST00000591584 SLC10A4Q96EP9 437 aa11.33□□□□□ -0.6
VPS25-206ENST00000591584 JPH2Q9BR39 696 aaPredicted RBP11.33□□□□□ -0.6
VPS25-206ENST00000591584 CRACR2AQ9BSW2 395 aa11.33□□□□□ -0.6
VPS25-206ENST00000591584 TAF1DQ9H5J8 278 aaPredicted RBP11.33□□□□□ -0.6
VPS25-206ENST00000591584 INTUQ9ULD6 942 aa11.33□□□□□ -0.6
VPS25-206ENST00000591584 ASB14A6NK59 587 aa11.32□□□□□ -0.6
VPS25-206ENST00000591584 GAS2O43903 313 aaKnown RBP11.32□□□□□ -0.6
VPS25-206ENST00000591584 CNMDO75829 334 aa11.32□□□□□ -0.6
VPS25-206ENST00000591584 OATP04181 439 aa11.32□□□□□ -0.6
VPS25-206ENST00000591584 SLC9A1P19634 815 aa11.32□□□□□ -0.6
VPS25-206ENST00000591584 SLC26A2P50443 739 aa11.32□□□□□ -0.6
VPS25-206ENST00000591584 CYP2J2P51589 502 aa11.32□□□□□ -0.6
VPS25-206ENST00000591584 VAMP7P51809 220 aa11.32□□□□□ -0.6
VPS25-206ENST00000591584 NPEPPSP55786 919 aa11.32□□□□□ -0.6
VPS25-206ENST00000591584 JAM2P57087 298 aa11.32□□□□□ -0.6
VPS25-206ENST00000591584 PRKCEQ02156 737 aa11.32□□□□□ -0.6
VPS25-206ENST00000591584 RAPGEF1Q13905 1077 aa11.32□□□□□ -0.6
VPS25-206ENST00000591584 UTP14CQ5TAP6 766 aaKnown RBP11.32□□□□□ -0.6
VPS25-206ENST00000591584 SLFN12LQ6IEE8 588 aa11.32□□□□□ -0.6
VPS25-206ENST00000591584 IQCEQ6IPM2 695 aa11.32□□□□□ -0.6
VPS25-206ENST00000591584 SEPT14Q6ZU15 432 aa11.32□□□□□ -0.6
VPS25-206ENST00000591584 MAEAQ7L5Y9 396 aa11.32□□□□□ -0.6
VPS25-206ENST00000591584 TRAPPC11Q7Z392 1133 aa11.32□□□□□ -0.6
VPS25-206ENST00000591584 ZNF710Q8N1W2 664 aa11.32□□□□□ -0.6
VPS25-206ENST00000591584 TMC2Q8TDI7 906 aa11.32□□□□□ -0.6
VPS25-206ENST00000591584 MORC4Q8TE76 937 aa11.32□□□□□ -0.6
VPS25-206ENST00000591584 OPTNQ96CV9 577 aa11.32□□□□□ -0.6
VPS25-206ENST00000591584 NOX5Q96PH1 765 aa11.32□□□□□ -0.6
VPS25-206ENST00000591584 IRX2Q9BZI1 471 aaPredicted RBP11.32□□□□□ -0.6
VPS25-206ENST00000591584 POLD4Q9HCU8 107 aa11.32□□□□□ -0.6
VPS25-206ENST00000591584 HSPBP1Q9NZL4 362 aa11.32□□□□□ -0.6
VPS25-206ENST00000591584 GCNT4Q9P109 453 aa11.32□□□□□ -0.6
VPS25-206ENST00000591584 SEPT9Q9UHD8 586 aaPredicted RBP11.32□□□□□ -0.6
VPS25-206ENST00000591584 SAR1BQ9Y6B6 198 aa11.32□□□□□ -0.6
VPS25-206ENST00000591584 SYNGAP1Q96PV0 1343 aa11.32□□□□□ -0.6
VPS25-206ENST00000591584 DENND3A2RUS2 1198 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 CTAGE15A4D2H0 777 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 SOWAHBA6NEL2 793 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 FANCGO15287 622 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 SLC16A4O15374 487 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 ATP8B1O43520 1251 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 ZNF862O60290 1169 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 TLR2O60603 784 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 LDHAP00338 332 aaKnown RBP11.31□□□□□ -0.6
VPS25-206ENST00000591584 CTAGE8P0CG41 777 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 CETPP11597 493 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 MCM3P25205 808 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 CNGA1P29973 690 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 STAT5BP51692 787 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 GTF2A2P52657 109 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 CHMP4BP1P59074 171 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 RBM10P98175 930 aaKnown RBP11.31□□□□□ -0.6
VPS25-206ENST00000591584 AMPD2Q01433 879 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 MYL7Q01449 175 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 CNTN2Q02246 1040 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 BMS1Q14692 1282 aaKnown RBP11.31□□□□□ -0.6
VPS25-206ENST00000591584 GPR162Q16538 588 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 PLA2G4FQ68DD2 849 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 GPAT2Q6NUI2 795 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 RSRC2Q7L4I2 434 aaKnown RBP11.31□□□□□ -0.6
VPS25-206ENST00000591584 CYFIP1Q7L576 1253 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 PLPPR4Q7Z2D5 763 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 IRF2BP2Q7Z5L9 587 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms