RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	ADGRA3	Q8IWK6	1321 aa		19.27	■□□□□ 0.68
MBD1-221	ENST00000589867	ATG2A	Q2TAZ0	1938 aa		19.27	■□□□□ 0.68
MBD1-221	ENST00000589867	USO1	O60763	962 aa	Known RBP	19.27	■□□□□ 0.68
MBD1-221	ENST00000589867	SRGAP2C	P0DJJ0	459 aa		19.27	■□□□□ 0.68
MBD1-221	ENST00000589867	PDC	P20941	246 aa		19.27	■□□□□ 0.68
MBD1-221	ENST00000589867	MUT	P22033	750 aa		19.27	■□□□□ 0.68
MBD1-221	ENST00000589867	GLRA2	P23416	452 aa		19.27	■□□□□ 0.68
MBD1-221	ENST00000589867	PTPA	Q15257	358 aa		19.27	■□□□□ 0.68
MBD1-221	ENST00000589867	ODR4	Q5SWX8	454 aa		19.27	■□□□□ 0.68
MBD1-221	ENST00000589867	FAM102B	Q5T8I3	360 aa		19.27	■□□□□ 0.68
MBD1-221	ENST00000589867	DTHD1	Q6ZMT9	781 aa		19.27	■□□□□ 0.68
MBD1-221	ENST00000589867	ZNF598	Q86UK7	904 aa	Known RBP	19.27	■□□□□ 0.68
MBD1-221	ENST00000589867	ERMN	Q8TAM6	284 aa		19.27	■□□□□ 0.68
MBD1-221	ENST00000589867	SNX29	Q8TEQ0	813 aa		19.27	■□□□□ 0.68
MBD1-221	ENST00000589867	LRRC15	Q8TF66	581 aa		19.27	■□□□□ 0.68
MBD1-221	ENST00000589867	GDPD5	Q8WTR4	605 aa		19.27	■□□□□ 0.68
MBD1-221	ENST00000589867	CLP1	Q92989	425 aa	Known RBP	19.27	■□□□□ 0.68
MBD1-221	ENST00000589867	SCLT1	Q96NL6	688 aa		19.27	■□□□□ 0.68
MBD1-221	ENST00000589867	PNMA5	Q96PV4	448 aa		19.27	■□□□□ 0.68
MBD1-221	ENST00000589867	ATP6V0A4	Q9HBG4	840 aa		19.27	■□□□□ 0.68
MBD1-221	ENST00000589867	C1orf112	Q9NSG2	853 aa		19.27	■□□□□ 0.68
MBD1-221	ENST00000589867	KIAA1024	Q9UPX6	916 aa		19.27	■□□□□ 0.68
MBD1-221	ENST00000589867	MTCH2	Q9Y6C9	303 aa		19.27	■□□□□ 0.68
MBD1-221	ENST00000589867	DENND3	A2RUS2	1198 aa		19.26	■□□□□ 0.67
MBD1-221	ENST00000589867	HOXA11	P31270	313 aa	Predicted RBP	19.26	■□□□□ 0.67
MBD1-221	ENST00000589867	CAPS	Q13938	189 aa		19.26	■□□□□ 0.67
MBD1-221	ENST00000589867	EPC2	Q52LR7	807 aa		19.26	■□□□□ 0.67
MBD1-221	ENST00000589867	HYI	Q5T013	277 aa		19.26	■□□□□ 0.67
MBD1-221	ENST00000589867	ARL6IP4	Q66PJ3	421 aa	Known RBP	19.26	■□□□□ 0.67
MBD1-221	ENST00000589867	HAUS3	Q68CZ6	603 aa		19.26	■□□□□ 0.67
MBD1-221	ENST00000589867	IFNLR1	Q8IU57	520 aa	Predicted RBP	19.26	■□□□□ 0.67
MBD1-221	ENST00000589867	RNF149	Q8NC42	400 aa		19.26	■□□□□ 0.67
MBD1-221	ENST00000589867	TCP11	Q8WWU5	503 aa		19.26	■□□□□ 0.67
MBD1-221	ENST00000589867	BSND	Q8WZ55	320 aa		19.26	■□□□□ 0.67
MBD1-221	ENST00000589867	GAS2L1	Q99501	681 aa	Predicted RBP	19.26	■□□□□ 0.67
MBD1-221	ENST00000589867	HCST	Q9UBK5	93 aa		19.26	■□□□□ 0.67
MBD1-221	ENST00000589867	MRPL42	Q9Y6G3	142 aa	Known RBP	19.26	■□□□□ 0.67
MBD1-221	ENST00000589867	ASAP2	O43150	1006 aa		19.25	■□□□□ 0.67
MBD1-221	ENST00000589867	FGFR1	P11362	822 aa		19.25	■□□□□ 0.67
MBD1-221	ENST00000589867	PTEN	P60484	403 aa		19.25	■□□□□ 0.67
MBD1-221	ENST00000589867	SF3A1	Q15459	793 aa	Known RBP	19.25	■□□□□ 0.67
MBD1-221	ENST00000589867	AMHR2	Q16671	573 aa		19.25	■□□□□ 0.67
MBD1-221	ENST00000589867	PADI6	Q6TGC4	694 aa		19.25	■□□□□ 0.67
MBD1-221	ENST00000589867	SRGAP1	Q7Z6B7	1085 aa		19.25	■□□□□ 0.67
MBD1-221	ENST00000589867	ECHDC2	Q86YB7	292 aa		19.25	■□□□□ 0.67
MBD1-221	ENST00000589867	TMEM192	Q8IY95	271 aa		19.25	■□□□□ 0.67
MBD1-221	ENST00000589867	FIBCD1	Q8N539	461 aa		19.25	■□□□□ 0.67
MBD1-221	ENST00000589867	POLR3F	Q9H1D9	316 aa	Predicted RBP	19.25	■□□□□ 0.67
MBD1-221	ENST00000589867	ELAC1	Q9H777	363 aa	Known RBP	19.25	■□□□□ 0.67
MBD1-221	ENST00000589867	POLD4	Q9HCU8	107 aa		19.25	■□□□□ 0.67
MBD1-221	ENST00000589867	DDX19A	Q9NUU7	478 aa	Known RBP	19.25	■□□□□ 0.67
MBD1-221	ENST00000589867	CLIC4	Q9Y696	253 aa		19.25	■□□□□ 0.67
MBD1-221	ENST00000589867		A0A0U1RQF3	1178 aa		19.24	■□□□□ 0.67
MBD1-221	ENST00000589867	VWA3A	A6NCI4	1184 aa		19.24	■□□□□ 0.67
MBD1-221	ENST00000589867		E9PMD0	336 aa		19.24	■□□□□ 0.67
MBD1-221	ENST00000589867	STX6	O43752	255 aa		19.24	■□□□□ 0.67
MBD1-221	ENST00000589867	STAG3L1	P0CL83	205 aa		19.24	■□□□□ 0.67
MBD1-221	ENST00000589867	CYP11B2	P19099	503 aa		19.24	■□□□□ 0.67
MBD1-221	ENST00000589867	IBSP	P21815	317 aa	Predicted RBP	19.24	■□□□□ 0.67
MBD1-221	ENST00000589867	IGFBP4	P22692	258 aa		19.24	■□□□□ 0.67
MBD1-221	ENST00000589867	POU5F1B	Q06416	359 aa		19.24	■□□□□ 0.67
MBD1-221	ENST00000589867	PAN2	Q504Q3	1202 aa	Known RBP	19.24	■□□□□ 0.67
MBD1-221	ENST00000589867	MAEA	Q7L5Y9	396 aa		19.24	■□□□□ 0.67
MBD1-221	ENST00000589867	CMTR2	Q8IYT2	770 aa	Known RBP	19.24	■□□□□ 0.67
MBD1-221	ENST00000589867	TRAIP	Q9BWF2	469 aa		19.24	■□□□□ 0.67
MBD1-221	ENST00000589867	BHMT2	Q9H2M3	363 aa		19.24	■□□□□ 0.67
MBD1-221	ENST00000589867	PRDM6	Q9NQX0	595 aa		19.24	■□□□□ 0.67
MBD1-221	ENST00000589867	CHST12	Q9NRB3	414 aa		19.24	■□□□□ 0.67
MBD1-221	ENST00000589867	AGPAT5	Q9NUQ2	364 aa		19.24	■□□□□ 0.67
MBD1-221	ENST00000589867	TMEM161A	Q9NX61	479 aa		19.24	■□□□□ 0.67
MBD1-221	ENST00000589867	PCDHB7	Q9Y5E2	793 aa		19.24	■□□□□ 0.67
MBD1-221	ENST00000589867	XIRP2	A4UGR9	3374 aa		19.23	■□□□□ 0.67
MBD1-221	ENST00000589867	VCAN	P13611	3396 aa		19.23	■□□□□ 0.67
MBD1-221	ENST00000589867	SFPQ	P23246	707 aa	Known RBP eCLIP	19.23	■□□□□ 0.67
MBD1-221	ENST00000589867	MBTD1	Q05BQ5	628 aa		19.23	■□□□□ 0.67
MBD1-221	ENST00000589867	BTG3	Q14201	252 aa	Predicted RBP	19.23	■□□□□ 0.67
MBD1-221	ENST00000589867	MXD4	Q14582	209 aa	Predicted RBP	19.23	■□□□□ 0.67
MBD1-221	ENST00000589867	CLLU1OS	Q5K130	101 aa		19.23	■□□□□ 0.67
MBD1-221	ENST00000589867	UBXN11	Q5T124	520 aa		19.23	■□□□□ 0.67
MBD1-221	ENST00000589867	HSCB	Q8IWL3	235 aa		19.23	■□□□□ 0.67
MBD1-221	ENST00000589867	RAB34	Q9BZG1	259 aa		19.23	■□□□□ 0.67
MBD1-221	ENST00000589867	INO80B	Q9C086	356 aa	Predicted RBP	19.23	■□□□□ 0.67
MBD1-221	ENST00000589867	MYH15	Q9Y2K3	1946 aa		19.23	■□□□□ 0.67
MBD1-221	ENST00000589867	ARHGEF35	A5YM69	484 aa		19.22	■□□□□ 0.67
MBD1-221	ENST00000589867	MEIS3P2	A8K0S8	358 aa		19.22	■□□□□ 0.67
MBD1-221	ENST00000589867	C5orf67	F2Z3F1	127 aa		19.22	■□□□□ 0.67
MBD1-221	ENST00000589867	EYA4	O95677	639 aa		19.22	■□□□□ 0.67
MBD1-221	ENST00000589867	ZSCAN20	P17040	1043 aa	Predicted RBP	19.22	■□□□□ 0.67
MBD1-221	ENST00000589867	BMPR1A	P36894	532 aa		19.22	■□□□□ 0.67
MBD1-221	ENST00000589867	TMEM119	Q4V9L6	283 aa		19.22	■□□□□ 0.67
MBD1-221	ENST00000589867	KRT79	Q5XKE5	535 aa		19.22	■□□□□ 0.67
MBD1-221	ENST00000589867	LRRC55	Q6ZSA7	311 aa		19.22	■□□□□ 0.67
MBD1-221	ENST00000589867	CATSPER4	Q7RTX7	472 aa		19.22	■□□□□ 0.67
MBD1-221	ENST00000589867	DAW1	Q8N136	415 aa		19.22	■□□□□ 0.67
MBD1-221	ENST00000589867	FBXO22	Q8NEZ5	403 aa		19.22	■□□□□ 0.67
MBD1-221	ENST00000589867	SAMD11	Q96NU1	681 aa		19.22	■□□□□ 0.67
MBD1-221	ENST00000589867	CASD1	Q96PB1	797 aa		19.22	■□□□□ 0.67
MBD1-221	ENST00000589867	RUSC1	Q9BVN2	902 aa		19.22	■□□□□ 0.67
MBD1-221	ENST00000589867	NFKBIZ	Q9BYH8	718 aa		19.22	■□□□□ 0.67
MBD1-221	ENST00000589867	PIN4	Q9Y237	131 aa	Known RBP	19.22	■□□□□ 0.67

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